RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 H3BS24 57 aa8.65□□□□□ -1.02
SMARCA4-217ENST00000591595 FLNCQ14315 2725 aa8.65□□□□□ -1.02
SMARCA4-217ENST00000591595 H0YGX0 51 aa8.65□□□□□ -1.02
SMARCA4-217ENST00000591595 FUSP35637 526 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMARCA4-217ENST00000591595 FAM104AQ969W3 186 aa8.65□□□□□ -1.02
SMARCA4-217ENST00000591595 DOPEY1Q5JWR5 2465 aa8.65□□□□□ -1.02
SMARCA4-217ENST00000591595 IGHV3OR16-12A0A075B7B8 117 aa8.64□□□□□ -1.03
SMARCA4-217ENST00000591595 SLURP1P55000 103 aa8.64□□□□□ -1.03
SMARCA4-217ENST00000591595 ZANQ9Y493 2812 aa8.64□□□□□ -1.03
SMARCA4-217ENST00000591595 ITPR1Q14643 2758 aa8.64□□□□□ -1.03
SMARCA4-217ENST00000591595 PSPHP1O15172 72 aa8.64□□□□□ -1.03
SMARCA4-217ENST00000591595 Q1T7F1 81 aa8.64□□□□□ -1.03
SMARCA4-217ENST00000591595 CDKN2A-AS1Q9UH64 79 aa8.64□□□□□ -1.03
SMARCA4-217ENST00000591595 SETD2Q9BYW2 2564 aaPredicted RBP8.63□□□□□ -1.03
SMARCA4-217ENST00000591595 JMJD7-PLA2G4BH0Y9G9 81 aa8.63□□□□□ -1.03
SMARCA4-217ENST00000591595 SMIM11BQ8TCY0 68 aa8.63□□□□□ -1.03
SMARCA4-217ENST00000591595 PTPN13Q12923 2485 aa8.63□□□□□ -1.03
SMARCA4-217ENST00000591595 Q6ZRP5 223 aa8.63□□□□□ -1.03
SMARCA4-217ENST00000591595 LINC00337Q8N6G1 96 aa8.62□□□□□ -1.03
SMARCA4-217ENST00000591595 NAV2Q8IVL1 2488 aa8.62□□□□□ -1.03
SMARCA4-217ENST00000591595 RPL36AP83881 106 aaKnown RBP8.62□□□□□ -1.03
SMARCA4-217ENST00000591595 LINC01356Q8N9X3 169 aa8.62□□□□□ -1.03
SMARCA4-217ENST00000591595 RPL36ALQ969Q0 106 aaKnown RBP8.62□□□□□ -1.03
SMARCA4-217ENST00000591595 LRCOL1A6NCL2 159 aa8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 LINC01547P58512 204 aaPredicted RBP8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 Q6ZSN1 163 aa8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 Q6ZTC4 211 aa8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 LINC00467Q9BRT7 94 aa8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 ANKRD17O75179 2603 aaKnown RBP8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 SONP18583 2426 aaKnown RBP8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 LRRK2Q5S007 2527 aa8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 M0R378 163 aa8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 HAMPP81172 84 aa8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 C18orf65Q6ZTR6 163 aa8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 Q8N3U1 123 aa8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 Q6ZTI0 123 aa8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 BBC3Q96PG8 261 aaPredicted RBP8.61□□□□□ -1.03
SMARCA4-217ENST00000591595 NREPQ16612 68 aa8.6□□□□□ -1.03
SMARCA4-217ENST00000591595 LINC00588Q9Y4M8 146 aa8.6□□□□□ -1.03
SMARCA4-217ENST00000591595 CFAP46Q8IYW2 2715 aa8.6□□□□□ -1.03
SMARCA4-217ENST00000591595 PRYO14603 147 aa8.6□□□□□ -1.03
SMARCA4-217ENST00000591595 ZFYVE26Q68DK2 2539 aa8.59□□□□□ -1.03
SMARCA4-217ENST00000591595 ABCA12Q86UK0 2595 aa8.59□□□□□ -1.03
SMARCA4-217ENST00000591595 CHCHD7Q9BUK0 85 aa8.59□□□□□ -1.03
SMARCA4-217ENST00000591595 PIEZO1Q92508 2521 aa8.58□□□□□ -1.04
SMARCA4-217ENST00000591595 A8MU10 97 aa8.58□□□□□ -1.04
SMARCA4-217ENST00000591595 UTP20O75691 2785 aaKnown RBP8.58□□□□□ -1.04
SMARCA4-217ENST00000591595 IGHV3-53P01767 116 aa8.58□□□□□ -1.04
SMARCA4-217ENST00000591595 IGKV2-28A0A075B6P5 120 aa8.57□□□□□ -1.04
SMARCA4-217ENST00000591595 hDV103S1A0JD37 113 aa8.57□□□□□ -1.04
SMARCA4-217ENST00000591595 TMEM256-PLSCR3K7ERE1 68 aa8.57□□□□□ -1.04
SMARCA4-217ENST00000591595 IGKV2D-28P01615 120 aa8.57□□□□□ -1.04
SMARCA4-217ENST00000591595 CUBNO60494 3623 aa8.57□□□□□ -1.04
SMARCA4-217ENST00000591595 DSCR9P59020 149 aa8.57□□□□□ -1.04
SMARCA4-217ENST00000591595 UBE2BP63146 152 aa8.57□□□□□ -1.04
SMARCA4-217ENST00000591595 TRGV1A0A0A0MS02 117 aa8.56□□□□□ -1.04
SMARCA4-217ENST00000591595 ZNF702PQ9H963 129 aa8.56□□□□□ -1.04
SMARCA4-217ENST00000591595 IGLV5-39A0A0G2JS06 123 aa8.56□□□□□ -1.04
SMARCA4-217ENST00000591595 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
SMARCA4-217ENST00000591595 INSP01308 110 aa8.56□□□□□ -1.04
SMARCA4-217ENST00000591595 Q6ZVQ6 151 aa8.56□□□□□ -1.04
SMARCA4-217ENST00000591595 CCDC168Q8NDH2 2452 aa8.56□□□□□ -1.04
SMARCA4-217ENST00000591595 TRAV22A0A0B4J277 110 aa8.56□□□□□ -1.04
SMARCA4-217ENST00000591595 C11orf44Q8N8P7 122 aa8.56□□□□□ -1.04
SMARCA4-217ENST00000591595 SND1-IT1Q9HBX3 110 aa8.56□□□□□ -1.04
SMARCA4-217ENST00000591595 CSMD2Q7Z408 3487 aa8.56□□□□□ -1.04
SMARCA4-217ENST00000591595 PRB1P04280 392 aa8.55□□□□□ -1.04
SMARCA4-217ENST00000591595 EPG5Q9HCE0 2579 aa8.55□□□□□ -1.04
SMARCA4-217ENST00000591595 JMJD1CQ15652 2540 aa8.55□□□□□ -1.04
SMARCA4-217ENST00000591595 IGLV5-45A0A087WSX0 123 aa8.55□□□□□ -1.04
SMARCA4-217ENST00000591595 C8orf87E5RJ46 101 aa8.55□□□□□ -1.04
SMARCA4-217ENST00000591595 MAP6D1Q9H9H5 199 aa8.55□□□□□ -1.04
SMARCA4-217ENST00000591595 LYRM9A8MSI8 78 aa8.53□□□□□ -1.04
SMARCA4-217ENST00000591595 COX6A2Q02221 97 aa8.53□□□□□ -1.04
SMARCA4-217ENST00000591595 SYCNQ0VAF6 134 aa8.53□□□□□ -1.04
SMARCA4-217ENST00000591595 ZNF73O43830 326 aaPredicted RBP8.53□□□□□ -1.04
SMARCA4-217ENST00000591595 MXRA5Q9NR99 2828 aa8.53□□□□□ -1.04
SMARCA4-217ENST00000591595 NDUFS5O43920 106 aa8.53□□□□□ -1.04
SMARCA4-217ENST00000591595 CXCL6P80162 114 aa8.53□□□□□ -1.04
SMARCA4-217ENST00000591595 IGKV3OR2-268A0A0C4DH90 116 aa8.52□□□□□ -1.05
SMARCA4-217ENST00000591595 TRBV10-1A0A0K0K1A3 114 aa8.52□□□□□ -1.05
SMARCA4-217ENST00000591595 Q6YL49 198 aa8.52□□□□□ -1.05
SMARCA4-217ENST00000591595 BPY2O14599 106 aa8.52□□□□□ -1.05
SMARCA4-217ENST00000591595 RNASE1P07998 156 aaKnown RBP8.51□□□□□ -1.05
SMARCA4-217ENST00000591595 SMIM1B2RUZ4 78 aa8.5□□□□□ -1.05
SMARCA4-217ENST00000591595 LINC00242Q5T6M2 205 aa8.5□□□□□ -1.05
SMARCA4-217ENST00000591595 ZNF462Q96JM2 2506 aa8.5□□□□□ -1.05
SMARCA4-217ENST00000591595 CHD6Q8TD26 2715 aa8.5□□□□□ -1.05
SMARCA4-217ENST00000591595 UBE2L6O14933 153 aa8.5□□□□□ -1.05
SMARCA4-217ENST00000591595 SPTSSBQ8NFR3 76 aa8.5□□□□□ -1.05
SMARCA4-217ENST00000591595 A8MUN3 132 aa8.5□□□□□ -1.05
SMARCA4-217ENST00000591595 C1orf64Q8NEQ6 169 aa8.5□□□□□ -1.05
SMARCA4-217ENST00000591595 TOMM7Q9P0U1 55 aa8.5□□□□□ -1.05
SMARCA4-217ENST00000591595 DEFB114Q30KQ6 69 aa8.49□□□□□ -1.05
SMARCA4-217ENST00000591595 TEX15Q9BXT5 2789 aa8.49□□□□□ -1.05
SMARCA4-217ENST00000591595 IGSF10Q6WRI0 2623 aa8.49□□□□□ -1.05
SMARCA4-217ENST00000591595 Q6ZQT0 140 aa8.48□□□□□ -1.05
SMARCA4-217ENST00000591595 LINC00167Q96N53 147 aa8.48□□□□□ -1.05
SMARCA4-217ENST00000591595 SCXQ7RTU7 201 aa8.48□□□□□ -1.05
SMARCA4-217ENST00000591595 LINC00269Q8N2A0 174 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms