RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 NDUFA6P56556 154 aa7.25□□□□□ -1.25
VMP1-211ENST00000591315 PMVKQ15126 192 aa7.25□□□□□ -1.25
VMP1-211ENST00000591315 C9orf116Q5BN46 136 aaPredicted RBP7.25□□□□□ -1.25
VMP1-211ENST00000591315 LINC00469Q8N7U9 141 aa7.25□□□□□ -1.25
VMP1-211ENST00000591315 GEMIN7Q9H840 131 aaKnown RBP7.25□□□□□ -1.25
VMP1-211ENST00000591315 TOMM7Q9P0U1 55 aa7.25□□□□□ -1.25
VMP1-211ENST00000591315 A0A1W2PNN7 141 aa7.24□□□□□ -1.25
VMP1-211ENST00000591315 LINC00310P59036 64 aa7.24□□□□□ -1.25
VMP1-211ENST00000591315 RPL37AP61513 92 aaKnown RBP7.24□□□□□ -1.25
VMP1-211ENST00000591315 HERVK_113P63121 156 aa7.24□□□□□ -1.25
VMP1-211ENST00000591315 RPL18AQ02543 176 aaKnown RBP7.24□□□□□ -1.25
VMP1-211ENST00000591315 LINC01561Q8N1V8 128 aa7.24□□□□□ -1.25
VMP1-211ENST00000591315 MRPL35Q9NZE8 188 aaKnown RBP7.24□□□□□ -1.25
VMP1-211ENST00000591315 HERC1Q15751 4861 aa7.24□□□□□ -1.25
VMP1-211ENST00000591315 TINCRA0A1B0GVN0 87 aa7.23□□□□□ -1.25
VMP1-211ENST00000591315 SMIM1B2RUZ4 78 aa7.23□□□□□ -1.25
VMP1-211ENST00000591315 GHRHP01286 108 aa7.23□□□□□ -1.25
VMP1-211ENST00000591315 SPINK8P0C7L1 97 aa7.23□□□□□ -1.25
VMP1-211ENST00000591315 RAB5BP61020 215 aa7.23□□□□□ -1.25
VMP1-211ENST00000591315 RNF151Q2KHN1 245 aa7.23□□□□□ -1.25
VMP1-211ENST00000591315 FAM19A2Q8N3H0 131 aa7.23□□□□□ -1.25
VMP1-211ENST00000591315 IGLV5-45A0A087WSX0 123 aa7.22□□□□□ -1.25
VMP1-211ENST00000591315 LINC01549A6NIU2 74 aa7.22□□□□□ -1.25
VMP1-211ENST00000591315 NUPR1O60356 82 aa7.22□□□□□ -1.25
VMP1-211ENST00000591315 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
VMP1-211ENST00000591315 Q6ZRP5 223 aa7.22□□□□□ -1.25
VMP1-211ENST00000591315 BAGE3Q86Y29 109 aa7.22□□□□□ -1.25
VMP1-211ENST00000591315 FAM168BA1KXE4 195 aa7.21□□□□□ -1.26
VMP1-211ENST00000591315 EIF4EBP3O60516 100 aaPredicted RBP7.21□□□□□ -1.26
VMP1-211ENST00000591315 IGLC3P0DOY3 106 aa7.21□□□□□ -1.26
VMP1-211ENST00000591315 SEC11AP67812 179 aa7.21□□□□□ -1.26
VMP1-211ENST00000591315 GAGE2EQ4V326 116 aa7.21□□□□□ -1.26
VMP1-211ENST00000591315 CHCHD1Q96BP2 118 aaKnown RBP7.21□□□□□ -1.26
VMP1-211ENST00000591315 PACRGQ96M98 296 aaPredicted RBP7.21□□□□□ -1.26
VMP1-211ENST00000591315 GAGE2DQ9UEU5 116 aa7.21□□□□□ -1.26
VMP1-211ENST00000591315 F8WDY8 70 aa7.2□□□□□ -1.26
VMP1-211ENST00000591315 SERF1AO75920 110 aa7.2□□□□□ -1.26
VMP1-211ENST00000591315 ATP5LO75964 103 aa7.2□□□□□ -1.26
VMP1-211ENST00000591315 PRSS2P07478 247 aa7.2□□□□□ -1.26
VMP1-211ENST00000591315 ZNF22P17026 224 aaPredicted RBP7.2□□□□□ -1.26
VMP1-211ENST00000591315 C6orf226Q5I0X4 101 aa7.2□□□□□ -1.26
VMP1-211ENST00000591315 KRTAP7-1Q8IUC3 87 aa7.2□□□□□ -1.26
VMP1-211ENST00000591315 Q8IZM0 81 aa7.2□□□□□ -1.26
VMP1-211ENST00000591315 C11orf86A6NJI1 115 aa7.19□□□□□ -1.26
VMP1-211ENST00000591315 TLX1NBP0CAT3 122 aa7.19□□□□□ -1.26
VMP1-211ENST00000591315 LINC00474Q9P2X8 69 aa7.19□□□□□ -1.26
VMP1-211ENST00000591315 TRBV30A0A0K0K1B3 111 aa7.18□□□□□ -1.26
VMP1-211ENST00000591315 HSBP1O75506 76 aa7.18□□□□□ -1.26
VMP1-211ENST00000591315 CKS1BP61024 79 aa7.18□□□□□ -1.26
VMP1-211ENST00000591315 PHF5AQ7RTV0 110 aaKnown RBP7.18□□□□□ -1.26
VMP1-211ENST00000591315 COX7B2Q8TF08 81 aa7.18□□□□□ -1.26
VMP1-211ENST00000591315 IFI27L1Q96BM0 104 aa7.18□□□□□ -1.26
VMP1-211ENST00000591315 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
VMP1-211ENST00000591315 KRTAP11-1Q8IUC1 163 aa7.17□□□□□ -1.26
VMP1-211ENST00000591315 PKIGQ9Y2B9 76 aa7.17□□□□□ -1.26
VMP1-211ENST00000591315 NDUFC2-KCTD14E9PQ53 114 aa7.16□□□□□ -1.26
VMP1-211ENST00000591315 FAM19A5Q7Z5A7 132 aaPredicted RBP7.16□□□□□ -1.26
VMP1-211ENST00000591315 C7orf33Q8WU49 177 aa7.16□□□□□ -1.26
VMP1-211ENST00000591315 CHTOPQ9Y3Y2 248 aaKnown RBP7.16□□□□□ -1.26
VMP1-211ENST00000591315 IGLV5-39A0A0G2JS06 123 aa7.15□□□□□ -1.26
VMP1-211ENST00000591315 F8VRH5 84 aa7.15□□□□□ -1.26
VMP1-211ENST00000591315 H3BRM9 83 aa7.15□□□□□ -1.26
VMP1-211ENST00000591315 FABP4P15090 132 aa7.15□□□□□ -1.26
VMP1-211ENST00000591315 PRR3P79522 188 aaKnown RBP7.15□□□□□ -1.26
VMP1-211ENST00000591315 XAGE1AQ9HD64 81 aa7.15□□□□□ -1.26
VMP1-211ENST00000591315 H0Y8G0 127 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 HIST1H2BKO60814 126 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 HIST1H2BJP06899 126 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 HIST1H2BOP23527 126 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 HIST1H2BBP33778 126 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 HIST1H2BDP58876 126 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 HIST1H2BCP62807 126 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 HIST2H2BEQ16778 126 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.14□□□□□ -1.27
VMP1-211ENST00000591315 TMEM170BQ5T4T1 132 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 HIST1H2BHQ93079 126 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 HIST1H2BNQ99877 126 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 HIST1H2BMQ99879 126 aa7.14□□□□□ -1.27
VMP1-211ENST00000591315 TRAV12-1A0A0B4J245 112 aa7.13□□□□□ -1.27
VMP1-211ENST00000591315 SERTAD4-AS1Q5TG53 156 aa7.13□□□□□ -1.27
VMP1-211ENST00000591315 LEPROTL1O95214 131 aa7.12□□□□□ -1.27
VMP1-211ENST00000591315 PMCHL2Q9BQD1 86 aa7.12□□□□□ -1.27
VMP1-211ENST00000591315 PSORS1C2Q9UIG4 136 aa7.12□□□□□ -1.27
VMP1-211ENST00000591315 TMEM223A0PJW6 202 aa7.11□□□□□ -1.27
VMP1-211ENST00000591315 CXCL5P42830 114 aa7.11□□□□□ -1.27
VMP1-211ENST00000591315 ZNF625Q96I27 306 aaPredicted RBP7.11□□□□□ -1.27
VMP1-211ENST00000591315 KRTAP29-1A8MX34 341 aaPredicted RBP7.1□□□□□ -1.27
VMP1-211ENST00000591315 M0QXV9 152 aa7.1□□□□□ -1.27
VMP1-211ENST00000591315 TNXBP22105 4242 aa7.09□□□□□ -1.27
VMP1-211ENST00000591315 ATP6V1G1O75348 118 aa7.09□□□□□ -1.27
VMP1-211ENST00000591315 PFN2P35080 140 aa7.09□□□□□ -1.27
VMP1-211ENST00000591315 SRSF9Q13242 221 aaKnown RBP eCLIP7.08□□□□□ -1.28
VMP1-211ENST00000591315 HSPB8Q9UJY1 196 aa7.08□□□□□ -1.28
VMP1-211ENST00000591315 C22orf24Q9Y442 160 aa7.08□□□□□ -1.28
VMP1-211ENST00000591315 TSPEAR-AS2P59090 65 aa7.07□□□□□ -1.28
VMP1-211ENST00000591315 C1orf137Q5JT78 98 aa7.07□□□□□ -1.28
VMP1-211ENST00000591315 ERG28Q9UKR5 140 aa7.07□□□□□ -1.28
VMP1-211ENST00000591315 A0A0U1RRA0 63 aa7.06□□□□□ -1.28
VMP1-211ENST00000591315 Q8NDZ9 215 aa7.06□□□□□ -1.28
VMP1-211ENST00000591315 OXTP01178 125 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms