RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 BVES-AS1Q5T3Y7 98 aa11.24□□□□□ -0.61
RPRD1A-209ENST00000590898 HIGD1BQ9P298 99 aa11.23□□□□□ -0.61
RPRD1A-209ENST00000590898 HECTD4Q9Y4D8 3996 aa11.23□□□□□ -0.61
RPRD1A-209ENST00000590898 SMIM1B2RUZ4 78 aa11.23□□□□□ -0.61
RPRD1A-209ENST00000590898 USP17L23D6RBM5 183 aa11.23□□□□□ -0.61
RPRD1A-209ENST00000590898 H3BRM9 83 aa11.22□□□□□ -0.61
RPRD1A-209ENST00000590898 WFDC2Q14508 124 aa11.22□□□□□ -0.61
RPRD1A-209ENST00000590898 LINC01561Q8N1V8 128 aa11.22□□□□□ -0.61
RPRD1A-209ENST00000590898 A0A087WZ39 114 aa11.21□□□□□ -0.61
RPRD1A-209ENST00000590898 SCGB1D4Q6XE38 83 aa11.21□□□□□ -0.61
RPRD1A-209ENST00000590898 C5orf38Q86SI9 138 aa11.21□□□□□ -0.61
RPRD1A-209ENST00000590898 Q8N814 137 aa11.21□□□□□ -0.61
RPRD1A-209ENST00000590898 A0A1B0GVY2 172 aa11.21□□□□□ -0.62
RPRD1A-209ENST00000590898 LECT2O14960 151 aa11.21□□□□□ -0.62
RPRD1A-209ENST00000590898 MALP21145 153 aa11.21□□□□□ -0.62
RPRD1A-209ENST00000590898 HSD52Q0P140 79 aa11.21□□□□□ -0.62
RPRD1A-209ENST00000590898 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
RPRD1A-209ENST00000590898 APOMO95445 188 aa11.2□□□□□ -0.62
RPRD1A-209ENST00000590898 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
RPRD1A-209ENST00000590898 PGPEP1Q9NXJ5 209 aa11.19□□□□□ -0.62
RPRD1A-209ENST00000590898 NTN5Q8WTR8 489 aaPredicted RBP11.18□□□□□ -0.62
RPRD1A-209ENST00000590898 NDUFA12Q9UI09 145 aa11.18□□□□□ -0.62
RPRD1A-209ENST00000590898 GVQW2A0A096LPI5 108 aaPredicted RBP11.17□□□□□ -0.62
RPRD1A-209ENST00000590898 GCSHP23434 173 aa11.17□□□□□ -0.62
RPRD1A-209ENST00000590898 LBHQ53QV2 105 aaPredicted RBP11.17□□□□□ -0.62
RPRD1A-209ENST00000590898 FXYD2P54710 66 aa11.17□□□□□ -0.62
RPRD1A-209ENST00000590898 Q6ZVH6 145 aa11.17□□□□□ -0.62
RPRD1A-209ENST00000590898 A0A1B0GV90 55 aa11.16□□□□□ -0.62
RPRD1A-209ENST00000590898 COL5A1-AS1Q5SY13 56 aa11.16□□□□□ -0.62
RPRD1A-209ENST00000590898 HIST1H4GQ99525 98 aa11.16□□□□□ -0.62
RPRD1A-209ENST00000590898 A0A0J9YXY3 114 aa11.15□□□□□ -0.62
RPRD1A-209ENST00000590898 ORAOV1Q8WV07 137 aa11.15□□□□□ -0.62
RPRD1A-209ENST00000590898 PKHD1P08F94 4074 aa11.15□□□□□ -0.62
RPRD1A-209ENST00000590898 CEND1Q8N111 149 aa11.15□□□□□ -0.62
RPRD1A-209ENST00000590898 ZNF561-AS1K7EIQ3 104 aa11.14□□□□□ -0.63
RPRD1A-209ENST00000590898 DNAH5Q8TE73 4624 aa11.14□□□□□ -0.63
RPRD1A-209ENST00000590898 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
RPRD1A-209ENST00000590898 CNBPP62633 177 aaKnown RBP11.13□□□□□ -0.63
RPRD1A-209ENST00000590898 TOMM7Q9P0U1 55 aa11.13□□□□□ -0.63
RPRD1A-209ENST00000590898 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.12□□□□□ -0.63
RPRD1A-209ENST00000590898 F8WDY8 70 aa11.12□□□□□ -0.63
RPRD1A-209ENST00000590898 NDUFA1O15239 70 aa11.12□□□□□ -0.63
RPRD1A-209ENST00000590898 HIGD2BQ4VC39 106 aa11.12□□□□□ -0.63
RPRD1A-209ENST00000590898 ZNF625Q96I27 306 aaPredicted RBP11.12□□□□□ -0.63
RPRD1A-209ENST00000590898 C2orf48Q96LS8 159 aa11.12□□□□□ -0.63
RPRD1A-209ENST00000590898 SRSF9Q13242 221 aaKnown RBP eCLIP11.11□□□□□ -0.63
RPRD1A-209ENST00000590898 TAL2Q16559 108 aa11.11□□□□□ -0.63
RPRD1A-209ENST00000590898 LITAFQ99732 161 aa11.11□□□□□ -0.63
RPRD1A-209ENST00000590898 IGLV5-52A0A0A0MRZ9 124 aa11.1□□□□□ -0.63
RPRD1A-209ENST00000590898 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
RPRD1A-209ENST00000590898 SLPIP03973 132 aa11.1□□□□□ -0.63
RPRD1A-209ENST00000590898 SPAG11BQ08648 103 aa11.1□□□□□ -0.63
RPRD1A-209ENST00000590898 KIAA0087Q14695 138 aa11.1□□□□□ -0.63
RPRD1A-209ENST00000590898 ADAMTSL4-AS1Q5T5F5 129 aa11.1□□□□□ -0.63
RPRD1A-209ENST00000590898 COX7B2Q8TF08 81 aa11.1□□□□□ -0.63
RPRD1A-209ENST00000590898 SPANXB1Q9NS25 103 aaPredicted RBP11.1□□□□□ -0.63
RPRD1A-209ENST00000590898 K7ERJ3 54 aa11.09□□□□□ -0.63
RPRD1A-209ENST00000590898 PTTG1IPP53801 180 aa11.09□□□□□ -0.63
RPRD1A-209ENST00000590898 TAX1BP3O14907 124 aa11.09□□□□□ -0.63
RPRD1A-209ENST00000590898 Q8IZM0 81 aa11.09□□□□□ -0.63
RPRD1A-209ENST00000590898 C9orf163Q8N9P6 203 aa11.08□□□□□ -0.64
RPRD1A-209ENST00000590898 NHP2Q9NX24 153 aaKnown RBP11.08□□□□□ -0.64
RPRD1A-209ENST00000590898 DAND5Q8N907 189 aa11.07□□□□□ -0.64
RPRD1A-209ENST00000590898 LINC00526Q96FQ7 95 aa11.07□□□□□ -0.64
RPRD1A-209ENST00000590898 A0A0U1RRA0 63 aa11.07□□□□□ -0.64
RPRD1A-209ENST00000590898 PRSS2P07478 247 aa11.07□□□□□ -0.64
RPRD1A-209ENST00000590898 C6orf226Q5I0X4 101 aa11.07□□□□□ -0.64
RPRD1A-209ENST00000590898 A6NDN8 102 aa11.06□□□□□ -0.64
RPRD1A-209ENST00000590898 TMEM238C9JI98 176 aa11.06□□□□□ -0.64
RPRD1A-209ENST00000590898 SYCNQ0VAF6 134 aa11.06□□□□□ -0.64
RPRD1A-209ENST00000590898 NPC2P61916 151 aa11.05□□□□□ -0.64
RPRD1A-209ENST00000590898 RAB37Q96AX2 223 aa11.05□□□□□ -0.64
RPRD1A-209ENST00000590898 CAMK2N2Q96S95 79 aa11.05□□□□□ -0.64
RPRD1A-209ENST00000590898 EIF4EBP3O60516 100 aaPredicted RBP11.05□□□□□ -0.64
RPRD1A-209ENST00000590898 FUSP35637 526 aaKnown RBP eCLIP11.05□□□□□ -0.64
RPRD1A-209ENST00000590898 DYNC1H1Q14204 4646 aaKnown RBP11.05□□□□□ -0.64
RPRD1A-209ENST00000590898 EPPK1P58107 5090 aaKnown RBP11.05□□□□□ -0.64
RPRD1A-209ENST00000590898 C16orf90A8MZG2 172 aa11.04□□□□□ -0.64
RPRD1A-209ENST00000590898 CXCL5P42830 114 aa11.04□□□□□ -0.64
RPRD1A-209ENST00000590898 MUSTN1Q8IVN3 82 aa11.04□□□□□ -0.64
RPRD1A-209ENST00000590898 CARD19Q96LW7 228 aa11.04□□□□□ -0.64
RPRD1A-209ENST00000590898 RNF151Q2KHN1 245 aa11.03□□□□□ -0.64
RPRD1A-209ENST00000590898 C2orf82Q6UX34 121 aa11.03□□□□□ -0.64
RPRD1A-209ENST00000590898 NAA38Q9BRA0 125 aaKnown RBP11.03□□□□□ -0.64
RPRD1A-209ENST00000590898 LRP1BQ9NZR2 4599 aa11.03□□□□□ -0.64
RPRD1A-209ENST00000590898 CKS1BP61024 79 aa11.03□□□□□ -0.64
RPRD1A-209ENST00000590898 Q6ZRU5 148 aa11.03□□□□□ -0.64
RPRD1A-209ENST00000590898 SPANXDQ9BXN6 97 aa11.02□□□□□ -0.65
RPRD1A-209ENST00000590898 SPANXCQ9NY87 97 aa11.02□□□□□ -0.65
RPRD1A-209ENST00000590898 SMIM13P0DJ93 91 aa11.01□□□□□ -0.65
RPRD1A-209ENST00000590898 MEIG1Q5JSS6 88 aa11.01□□□□□ -0.65
RPRD1A-209ENST00000590898 TRBV30A0A0K0K1B3 111 aa11.01□□□□□ -0.65
RPRD1A-209ENST00000590898 TIMM17BO60830 172 aa11.01□□□□□ -0.65
RPRD1A-209ENST00000590898 HERV-K104P63124 156 aa11.01□□□□□ -0.65
RPRD1A-209ENST00000590898 UNQ6190/PRO20217Q6UXQ8 127 aa11.01□□□□□ -0.65
RPRD1A-209ENST00000590898 A4D1N5 150 aa11□□□□□ -0.65
RPRD1A-209ENST00000590898 SFTA2Q6UW10 78 aa11□□□□□ -0.65
RPRD1A-209ENST00000590898 PKIGQ9Y2B9 76 aa11□□□□□ -0.65
RPRD1A-209ENST00000590898 A0A1B0GWB2 263 aa10.99□□□□□ -0.65
RPRD1A-209ENST00000590898 C10orf25Q5T742 122 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms