RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 NDUFA6P56556 154 aa7.52□□□□□ -1.21
TPM4-212ENST00000590180 PMVKQ15126 192 aa7.52□□□□□ -1.21
TPM4-212ENST00000590180 PHF5AQ7RTV0 110 aaKnown RBP7.52□□□□□ -1.21
TPM4-212ENST00000590180 C18orf32Q8TCD1 76 aa7.52□□□□□ -1.21
TPM4-212ENST00000590180 TINCRA0A1B0GVN0 87 aa7.51□□□□□ -1.21
TPM4-212ENST00000590180 RAB5BP61020 215 aa7.51□□□□□ -1.21
TPM4-212ENST00000590180 Q8IZM0 81 aa7.51□□□□□ -1.21
TPM4-212ENST00000590180 LRP1Q07954 4544 aaKnown RBP7.5□□□□□ -1.21
TPM4-212ENST00000590180 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
TPM4-212ENST00000590180 NDUFC2-KCTD14E9PQ53 114 aa7.5□□□□□ -1.21
TPM4-212ENST00000590180 URB1-AS1Q96HZ7 61 aa7.5□□□□□ -1.21
TPM4-212ENST00000590180 PMCHL1Q16048 86 aa7.49□□□□□ -1.21
TPM4-212ENST00000590180 PDZD11Q5EBL8 140 aa7.49□□□□□ -1.21
TPM4-212ENST00000590180 FAM19A5Q7Z5A7 132 aaPredicted RBP7.49□□□□□ -1.21
TPM4-212ENST00000590180 HBDP02042 147 aa7.48□□□□□ -1.21
TPM4-212ENST00000590180 SPINK6Q6UWN8 80 aa7.48□□□□□ -1.21
TPM4-212ENST00000590180 COX7B2Q8TF08 81 aa7.48□□□□□ -1.21
TPM4-212ENST00000590180 PSORS1C2Q9UIG4 136 aa7.48□□□□□ -1.21
TPM4-212ENST00000590180 A0A096LNJ9 63 aa7.47□□□□□ -1.21
TPM4-212ENST00000590180 SMIM1B2RUZ4 78 aa7.47□□□□□ -1.21
TPM4-212ENST00000590180 F8VRH5 84 aa7.47□□□□□ -1.21
TPM4-212ENST00000590180 H3BRM9 83 aa7.47□□□□□ -1.21
TPM4-212ENST00000590180 SPINK8P0C7L1 97 aa7.47□□□□□ -1.21
TPM4-212ENST00000590180 C1orf137Q5JT78 98 aa7.47□□□□□ -1.21
TPM4-212ENST00000590180 SLC7A5P1Q8MH63 180 aa7.47□□□□□ -1.21
TPM4-212ENST00000590180 PKHD1L1Q86WI1 4243 aa7.46□□□□□ -1.21
TPM4-212ENST00000590180 IGLV5-45A0A087WSX0 123 aa7.46□□□□□ -1.22
TPM4-212ENST00000590180 ATP5LO75964 103 aa7.46□□□□□ -1.22
TPM4-212ENST00000590180 CXCL5P42830 114 aa7.46□□□□□ -1.22
TPM4-212ENST00000590180 SRSF9Q13242 221 aaKnown RBP eCLIP7.46□□□□□ -1.22
TPM4-212ENST00000590180 C9orf129Q5T035 196 aaKnown RBP7.46□□□□□ -1.22
TPM4-212ENST00000590180 CBLN2Q8IUK8 224 aa7.46□□□□□ -1.22
TPM4-212ENST00000590180 YPEL4Q96NS1 127 aa7.46□□□□□ -1.22
TPM4-212ENST00000590180 UBE2BP63146 152 aa7.45□□□□□ -1.22
TPM4-212ENST00000590180 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
TPM4-212ENST00000590180 REG3GQ6UW15 175 aa7.45□□□□□ -1.22
TPM4-212ENST00000590180 BAGE3Q86Y29 109 aa7.45□□□□□ -1.22
TPM4-212ENST00000590180 XAGE1AQ9HD64 81 aa7.45□□□□□ -1.22
TPM4-212ENST00000590180 FAT3Q8TDW7 4589 aa7.45□□□□□ -1.22
TPM4-212ENST00000590180 M0QXV9 152 aa7.44□□□□□ -1.22
TPM4-212ENST00000590180 IGLC3P0DOY3 106 aa7.44□□□□□ -1.22
TPM4-212ENST00000590180 KRTAP7-1Q8IUC3 87 aa7.44□□□□□ -1.22
TPM4-212ENST00000590180 MT1HL1P0DM35 61 aa7.43□□□□□ -1.22
TPM4-212ENST00000590180 CHCHD1Q96BP2 118 aaKnown RBP7.43□□□□□ -1.22
TPM4-212ENST00000590180 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
TPM4-212ENST00000590180 LINC01600Q96MT4 127 aa7.42□□□□□ -1.22
TPM4-212ENST00000590180 TRGC2P03986 189 aa7.41□□□□□ -1.22
TPM4-212ENST00000590180 IGLV7-43P04211 117 aa7.41□□□□□ -1.22
TPM4-212ENST00000590180 ZNF22P17026 224 aaPredicted RBP7.41□□□□□ -1.22
TPM4-212ENST00000590180 TMEM170BQ5T4T1 132 aa7.41□□□□□ -1.22
TPM4-212ENST00000590180 IFI27L1Q96BM0 104 aa7.41□□□□□ -1.22
TPM4-212ENST00000590180 CHTOPQ9Y3Y2 248 aaKnown RBP7.41□□□□□ -1.22
TPM4-212ENST00000590180 C22orf24Q9Y442 160 aa7.41□□□□□ -1.22
TPM4-212ENST00000590180 C11orf86A6NJI1 115 aa7.4□□□□□ -1.22
TPM4-212ENST00000590180 HSBP1O75506 76 aa7.4□□□□□ -1.22
TPM4-212ENST00000590180 LBHQ53QV2 105 aaPredicted RBP7.4□□□□□ -1.22
TPM4-212ENST00000590180 IGLV5-39A0A0G2JS06 123 aa7.39□□□□□ -1.23
TPM4-212ENST00000590180 FAM19A2Q8N3H0 131 aa7.39□□□□□ -1.23
TPM4-212ENST00000590180 PFN2P35080 140 aa7.38□□□□□ -1.23
TPM4-212ENST00000590180 DIRC1Q969H9 104 aa7.38□□□□□ -1.23
TPM4-212ENST00000590180 PLA2G2DQ9UNK4 145 aa7.38□□□□□ -1.23
TPM4-212ENST00000590180 ZNF625Q96I27 306 aaPredicted RBP7.37□□□□□ -1.23
TPM4-212ENST00000590180 TRAV12-1A0A0B4J245 112 aa7.36□□□□□ -1.23
TPM4-212ENST00000590180 KRTAP10-8P60410 259 aa7.36□□□□□ -1.23
TPM4-212ENST00000590180 MRPL55Q7Z7F7 128 aaKnown RBP7.36□□□□□ -1.23
TPM4-212ENST00000590180 GAGE10A6NGK3 116 aa7.35□□□□□ -1.23
TPM4-212ENST00000590180 COLCA2A8K830 154 aa7.35□□□□□ -1.23
TPM4-212ENST00000590180 H0Y8G0 127 aa7.35□□□□□ -1.23
TPM4-212ENST00000590180 LINC00167Q96N53 147 aa7.35□□□□□ -1.23
TPM4-212ENST00000590180 TP73-AS1Q9UF72 201 aa7.35□□□□□ -1.23
TPM4-212ENST00000590180 ERG28Q9UKR5 140 aa7.35□□□□□ -1.23
TPM4-212ENST00000590180 RPL37AP8A6NKH3 93 aa7.34□□□□□ -1.23
TPM4-212ENST00000590180 SERF1AO75920 110 aa7.34□□□□□ -1.23
TPM4-212ENST00000590180 NKAPP1Q8N9T2 125 aa7.34□□□□□ -1.23
TPM4-212ENST00000590180 TMEM223A0PJW6 202 aa7.33□□□□□ -1.24
TPM4-212ENST00000590180 H0Y9J4 135 aa7.33□□□□□ -1.24
TPM4-212ENST00000590180 NUPR1O60356 82 aa7.33□□□□□ -1.24
TPM4-212ENST00000590180 LEPROTL1O95214 131 aa7.33□□□□□ -1.24
TPM4-212ENST00000590180 FABP4P15090 132 aa7.33□□□□□ -1.24
TPM4-212ENST00000590180 ODF1Q14990 250 aa7.33□□□□□ -1.24
TPM4-212ENST00000590180 ZNF861PO60384 105 aa7.32□□□□□ -1.24
TPM4-212ENST00000590180 LINC00158P58513 81 aa7.32□□□□□ -1.24
TPM4-212ENST00000590180 COX17Q14061 63 aa7.32□□□□□ -1.24
TPM4-212ENST00000590180 SFTA2Q6UW10 78 aa7.32□□□□□ -1.24
TPM4-212ENST00000590180 SND1-IT1Q9HBX3 110 aa7.32□□□□□ -1.24
TPM4-212ENST00000590180 A0A0U1RRA0 63 aa7.31□□□□□ -1.24
TPM4-212ENST00000590180 ATP6V1G1O75348 118 aa7.31□□□□□ -1.24
TPM4-212ENST00000590180 LINC00310P59036 64 aa7.31□□□□□ -1.24
TPM4-212ENST00000590180 IGLV5-37A0A075B6J1 123 aa7.3□□□□□ -1.24
TPM4-212ENST00000590180 SCO1O75880 301 aa7.3□□□□□ -1.24
TPM4-212ENST00000590180 RPL24P83731 157 aaKnown RBP7.3□□□□□ -1.24
TPM4-212ENST00000590180 PRR26Q8N8Z3 221 aa7.3□□□□□ -1.24
TPM4-212ENST00000590180 HSPB8Q9UJY1 196 aa7.3□□□□□ -1.24
TPM4-212ENST00000590180 BCE1O60756 84 aa7.29□□□□□ -1.24
TPM4-212ENST00000590180 RPL28P46779 137 aaKnown RBP7.29□□□□□ -1.24
TPM4-212ENST00000590180 TNXBP22105 4242 aa7.28□□□□□ -1.24
TPM4-212ENST00000590180 MEIG1Q5JSS6 88 aa7.28□□□□□ -1.24
TPM4-212ENST00000590180 IGKV2-28A0A075B6P5 120 aa7.27□□□□□ -1.25
TPM4-212ENST00000590180 IGKV2D-28P01615 120 aa7.27□□□□□ -1.25
TPM4-212ENST00000590180 SMIM13P0DJ93 91 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms