RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 IGHV3-30P01768 117 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 IGHV3-30-5P0DP03 117 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 RNASE4P34096 147 aaKnown RBP5.23□□□□□ -1.57
SMAD4-209ENST00000589941 LINC01547P58512 204 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-209ENST00000589941 LELP1Q5T871 98 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 FAM222AQ5U5X8 452 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 ZFP2Q6ZN57 461 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 Q75L30 129 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 SH2D6Q7Z4S9 175 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 STHQ8IWL8 128 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 C14orf178Q8N769 122 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-209ENST00000589941 PLEKHB2Q96CS7 222 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 PHLDA3Q9Y5J5 127 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 LPAP08519 4548 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 A0A1B0GV72 72 aa5.22□□□□□ -1.57
SMAD4-209ENST00000589941 SPART-AS1P0CW21 52 aa5.22□□□□□ -1.57
SMAD4-209ENST00000589941 MT1HL1P0DM35 61 aa5.22□□□□□ -1.57
SMAD4-209ENST00000589941 S100A4P26447 101 aaKnown RBP5.22□□□□□ -1.57
SMAD4-209ENST00000589941 CRYBA4P53673 196 aa5.22□□□□□ -1.57
SMAD4-209ENST00000589941 AMTNQ6UX39 209 aa5.22□□□□□ -1.57
SMAD4-209ENST00000589941 PPDPFLQ8WWR9 84 aa5.22□□□□□ -1.57
SMAD4-209ENST00000589941 GTSF1LQ9H1H1 148 aa5.22□□□□□ -1.57
SMAD4-209ENST00000589941 A0A0B4J2C4 111 aa5.21□□□□□ -1.58
SMAD4-209ENST00000589941 LEPROTO15243 131 aa5.21□□□□□ -1.58
SMAD4-209ENST00000589941 GNRH2O43555 120 aa5.21□□□□□ -1.58
SMAD4-209ENST00000589941 APOMO95445 188 aa5.21□□□□□ -1.58
SMAD4-209ENST00000589941 TSPEAR-AS2P59090 65 aa5.21□□□□□ -1.58
SMAD4-209ENST00000589941 TEN1Q86WV5 123 aa5.21□□□□□ -1.58
SMAD4-209ENST00000589941 C10orf126Q8N4M7 172 aa5.21□□□□□ -1.58
SMAD4-209ENST00000589941 DCANP1Q8TF63 244 aa5.21□□□□□ -1.58
SMAD4-209ENST00000589941 CARD19Q96LW7 228 aa5.21□□□□□ -1.58
SMAD4-209ENST00000589941 RHPN1-AS1Q9BWJ2 59 aa5.21□□□□□ -1.58
SMAD4-209ENST00000589941 Q9H8V8 135 aa5.21□□□□□ -1.58
SMAD4-209ENST00000589941 MRPL16Q9NX20 251 aaKnown RBP5.21□□□□□ -1.58
SMAD4-209ENST00000589941 IGHV3-16A0A0C4DH30 117 aa5.2□□□□□ -1.58
SMAD4-209ENST00000589941 TMEM223A0PJW6 202 aa5.2□□□□□ -1.58
SMAD4-209ENST00000589941 SDHAF1A6NFY7 115 aa5.2□□□□□ -1.58
SMAD4-209ENST00000589941 A8MTW9 85 aa5.2□□□□□ -1.58
SMAD4-209ENST00000589941 MGPP08493 103 aa5.2□□□□□ -1.58
SMAD4-209ENST00000589941 CFC1BP0CG36 223 aa5.2□□□□□ -1.58
SMAD4-209ENST00000589941 CFC1P0CG37 223 aa5.2□□□□□ -1.58
SMAD4-209ENST00000589941 KIR2DL4Q99706 377 aa5.2□□□□□ -1.58
SMAD4-209ENST00000589941 XCL2Q9UBD3 114 aa5.2□□□□□ -1.58
SMAD4-209ENST00000589941 J3QQQ9 107 aa5.19□□□□□ -1.58
SMAD4-209ENST00000589941 M0QY20 66 aa5.19□□□□□ -1.58
SMAD4-209ENST00000589941 ID1P41134 155 aa5.19□□□□□ -1.58
SMAD4-209ENST00000589941 SMAGPQ0VAQ4 97 aa5.19□□□□□ -1.58
SMAD4-209ENST00000589941 TTC32Q5I0X7 151 aa5.19□□□□□ -1.58
SMAD4-209ENST00000589941 SCGB1D4Q6XE38 83 aa5.19□□□□□ -1.58
SMAD4-209ENST00000589941 MTURNQ8N3F0 131 aa5.19□□□□□ -1.58
SMAD4-209ENST00000589941 PTH2Q96A98 100 aa5.19□□□□□ -1.58
SMAD4-209ENST00000589941 PYGO1Q9Y3Y4 419 aa5.19□□□□□ -1.58
SMAD4-209ENST00000589941 IGLV5-45A0A087WSX0 123 aa5.18□□□□□ -1.58
SMAD4-209ENST00000589941 A0A087WTM6 91 aa5.18□□□□□ -1.58
SMAD4-209ENST00000589941 F6UB75 175 aa5.18□□□□□ -1.58
SMAD4-209ENST00000589941 M0R2P5 195 aa5.18□□□□□ -1.58
SMAD4-209ENST00000589941 TCL1BO95988 128 aa5.18□□□□□ -1.58
SMAD4-209ENST00000589941 IGHV3-33P01772 117 aa5.18□□□□□ -1.58
SMAD4-209ENST00000589941 ZNF22P17026 224 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-209ENST00000589941 CMC4P56277 68 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-209ENST00000589941 SRSF9Q13242 221 aaKnown RBP eCLIP5.18□□□□□ -1.58
SMAD4-209ENST00000589941 FAM159AQ6UWV7 190 aa5.18□□□□□ -1.58
SMAD4-209ENST00000589941 Q6ZUT4 128 aa5.18□□□□□ -1.58
SMAD4-209ENST00000589941 C20orf203Q8NBC4 194 aa5.18□□□□□ -1.58
SMAD4-209ENST00000589941 TMEM263Q8WUH6 116 aaKnown RBP5.18□□□□□ -1.58
SMAD4-209ENST00000589941 PRO1854Q9UHT4 67 aa5.18□□□□□ -1.58
SMAD4-209ENST00000589941 IGHV3OR16-12A0A075B7B8 117 aa5.17□□□□□ -1.58
SMAD4-209ENST00000589941 A8MWV9 139 aa5.17□□□□□ -1.58
SMAD4-209ENST00000589941 TMEM262E9PQX1 116 aa5.17□□□□□ -1.58
SMAD4-209ENST00000589941 K7EQG2 157 aa5.17□□□□□ -1.58
SMAD4-209ENST00000589941 ZNF688P0C7X2 276 aa5.17□□□□□ -1.58
SMAD4-209ENST00000589941 RPL13AP40429 203 aaKnown RBP5.17□□□□□ -1.58
SMAD4-209ENST00000589941 CCL18P55774 89 aa5.17□□□□□ -1.58
SMAD4-209ENST00000589941 DEFB1P60022 68 aa5.17□□□□□ -1.58
SMAD4-209ENST00000589941 RPL39P62891 51 aaKnown RBP5.17□□□□□ -1.58
SMAD4-209ENST00000589941 FAM104AQ969W3 186 aa5.17□□□□□ -1.58
SMAD4-209ENST00000589941 LITAFQ99732 161 aa5.17□□□□□ -1.58
SMAD4-209ENST00000589941 IGLV4-3A0A075B6K6 122 aa5.16□□□□□ -1.58
SMAD4-209ENST00000589941 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-209ENST00000589941 TRBV30A0A0K0K1B3 111 aa5.16□□□□□ -1.58
SMAD4-209ENST00000589941 LGALS3P17931 250 aaKnown RBP5.16□□□□□ -1.58
SMAD4-209ENST00000589941 PSMB2P49721 201 aa5.16□□□□□ -1.58
SMAD4-209ENST00000589941 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-209ENST00000589941 DAD1P61803 113 aa5.16□□□□□ -1.58
SMAD4-209ENST00000589941 MRPS36P82909 103 aaKnown RBP5.16□□□□□ -1.58
SMAD4-209ENST00000589941 GAGE5Q13069 117 aa5.16□□□□□ -1.58
SMAD4-209ENST00000589941 GAGE6Q13070 117 aa5.16□□□□□ -1.58
SMAD4-209ENST00000589941 SPANXDQ9BXN6 97 aa5.16□□□□□ -1.58
SMAD4-209ENST00000589941 JPT2Q9H910 190 aa5.16□□□□□ -1.58
SMAD4-209ENST00000589941 SPANXCQ9NY87 97 aa5.16□□□□□ -1.58
SMAD4-209ENST00000589941 IGHV1OR15-1A0A075B7D0 117 aa5.15□□□□□ -1.59
SMAD4-209ENST00000589941 LOC107984156A0A0G2JMH3 177 aa5.15□□□□□ -1.59
SMAD4-209ENST00000589941 A4D1N5 150 aa5.15□□□□□ -1.59
SMAD4-209ENST00000589941 I3L3M4 83 aa5.15□□□□□ -1.59
SMAD4-209ENST00000589941 TIMM17BO60830 172 aa5.15□□□□□ -1.59
SMAD4-209ENST00000589941 CKS1BP61024 79 aa5.15□□□□□ -1.59
SMAD4-209ENST00000589941 Q6Q795 121 aa5.15□□□□□ -1.59
SMAD4-209ENST00000589941 ARL17AQ8IVW1 177 aa5.15□□□□□ -1.59
SMAD4-209ENST00000589941 ANKRD29Q8N6D5 301 aa5.15□□□□□ -1.59
SMAD4-209ENST00000589941 LINC00467Q9BRT7 94 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms