RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 CHCHD1Q96BP2 118 aaKnown RBP8.92□□□□□ -0.98
MBD1-220ENST00000589758 CST9LQ9H4G1 147 aa8.92□□□□□ -0.98
MBD1-220ENST00000589758 HERVK_113P63121 156 aa8.91□□□□□ -0.98
MBD1-220ENST00000589758 SRSF9Q13242 221 aaKnown RBP eCLIP8.91□□□□□ -0.98
MBD1-220ENST00000589758 FAM19A3Q7Z5A8 133 aa8.91□□□□□ -0.98
MBD1-220ENST00000589758 CDKN2A-AS1Q9UH64 79 aa8.91□□□□□ -0.98
MBD1-220ENST00000589758 A0A1W2PNN7 141 aa8.9□□□□□ -0.98
MBD1-220ENST00000589758 HSBP1O75506 76 aa8.9□□□□□ -0.98
MBD1-220ENST00000589758 SEC11AP67812 179 aa8.9□□□□□ -0.98
MBD1-220ENST00000589758 RPL18AQ02543 176 aaKnown RBP8.9□□□□□ -0.98
MBD1-220ENST00000589758 PDZD11Q5EBL8 140 aa8.9□□□□□ -0.98
MBD1-220ENST00000589758 MRPL35Q9NZE8 188 aaKnown RBP8.9□□□□□ -0.98
MBD1-220ENST00000589758 C9orf116Q5BN46 136 aaPredicted RBP8.89□□□□□ -0.99
MBD1-220ENST00000589758 FAM19A2Q8N3H0 131 aa8.89□□□□□ -0.99
MBD1-220ENST00000589758 LINC00469Q8N7U9 141 aa8.89□□□□□ -0.99
MBD1-220ENST00000589758 PACRGQ96M98 296 aaPredicted RBP8.89□□□□□ -0.99
MBD1-220ENST00000589758 TOMM7Q9P0U1 55 aa8.89□□□□□ -0.99
MBD1-220ENST00000589758 TNXBP22105 4242 aa8.88□□□□□ -0.99
MBD1-220ENST00000589758 TINCRA0A1B0GVN0 87 aa8.88□□□□□ -0.99
MBD1-220ENST00000589758 NDUFA1O15239 70 aa8.88□□□□□ -0.99
MBD1-220ENST00000589758 ATP5LO75964 103 aa8.88□□□□□ -0.99
MBD1-220ENST00000589758 SERF1AO75920 110 aa8.87□□□□□ -0.99
MBD1-220ENST00000589758 PRSS2P07478 247 aa8.87□□□□□ -0.99
MBD1-220ENST00000589758 KIAA0087Q14695 138 aa8.87□□□□□ -0.99
MBD1-220ENST00000589758 C10orf25Q5T742 122 aa8.87□□□□□ -0.99
MBD1-220ENST00000589758 C2orf82Q6UX34 121 aa8.87□□□□□ -0.99
MBD1-220ENST00000589758 UNQ6190/PRO20217Q6UXQ8 127 aa8.87□□□□□ -0.99
MBD1-220ENST00000589758 LINC01561Q8N1V8 128 aa8.87□□□□□ -0.99
MBD1-220ENST00000589758 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
MBD1-220ENST00000589758 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
MBD1-220ENST00000589758 TLX1NBP0CAT3 122 aa8.85□□□□□ -0.99
MBD1-220ENST00000589758 LINC00310P59036 64 aa8.85□□□□□ -0.99
MBD1-220ENST00000589758 C6orf226Q5I0X4 101 aa8.85□□□□□ -0.99
MBD1-220ENST00000589758 IFI27L1Q96BM0 104 aa8.85□□□□□ -0.99
MBD1-220ENST00000589758 PSORS1C2Q9UIG4 136 aa8.85□□□□□ -0.99
MBD1-220ENST00000589758 NUPR1O60356 82 aa8.84□□□□□ -0.99
MBD1-220ENST00000589758 IGLC3P0DOY3 106 aa8.84□□□□□ -0.99
MBD1-220ENST00000589758 C6orf48Q9UBA6 75 aa8.84□□□□□ -0.99
MBD1-220ENST00000589758 IGLV5-45A0A087WSX0 123 aa8.83□□□□□ -1
MBD1-220ENST00000589758 SMIM1B2RUZ4 78 aa8.83□□□□□ -1
MBD1-220ENST00000589758 ATP6V1G1O75348 118 aa8.83□□□□□ -1
MBD1-220ENST00000589758 CKS1BP61024 79 aa8.83□□□□□ -1
MBD1-220ENST00000589758 PHF5AQ7RTV0 110 aaKnown RBP8.83□□□□□ -1
MBD1-220ENST00000589758 Q8IZM0 81 aa8.83□□□□□ -1
MBD1-220ENST00000589758 CHTOPQ9Y3Y2 248 aaKnown RBP8.83□□□□□ -1
MBD1-220ENST00000589758 H0Y8G0 127 aa8.82□□□□□ -1
MBD1-220ENST00000589758 H3BRM9 83 aa8.82□□□□□ -1
MBD1-220ENST00000589758 S100A1P23297 94 aa8.82□□□□□ -1
MBD1-220ENST00000589758 C1orf137Q5JT78 98 aa8.82□□□□□ -1
MBD1-220ENST00000589758 TRBV30A0A0K0K1B3 111 aa8.81□□□□□ -1
MBD1-220ENST00000589758 C11orf86A6NJI1 115 aa8.81□□□□□ -1
MBD1-220ENST00000589758 HIST1H2BKO60814 126 aa8.81□□□□□ -1
MBD1-220ENST00000589758 LEPROTL1O95214 131 aa8.81□□□□□ -1
MBD1-220ENST00000589758 HIST1H2BJP06899 126 aa8.81□□□□□ -1
MBD1-220ENST00000589758 FABP4P15090 132 aa8.81□□□□□ -1
MBD1-220ENST00000589758 ZNF22P17026 224 aaPredicted RBP8.81□□□□□ -1
MBD1-220ENST00000589758 HIST1H2BOP23527 126 aa8.81□□□□□ -1
MBD1-220ENST00000589758 HIST1H2BBP33778 126 aa8.81□□□□□ -1
MBD1-220ENST00000589758 HIST1H2BDP58876 126 aa8.81□□□□□ -1
MBD1-220ENST00000589758 HIST1H2BCP62807 126 aa8.81□□□□□ -1
MBD1-220ENST00000589758 HIST2H2BEQ16778 126 aa8.81□□□□□ -1
MBD1-220ENST00000589758 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.81□□□□□ -1
MBD1-220ENST00000589758 COX7B2Q8TF08 81 aa8.81□□□□□ -1
MBD1-220ENST00000589758 HIST1H2BHQ93079 126 aa8.81□□□□□ -1
MBD1-220ENST00000589758 HIST1H2BNQ99877 126 aa8.81□□□□□ -1
MBD1-220ENST00000589758 HIST1H2BMQ99879 126 aa8.81□□□□□ -1
MBD1-220ENST00000589758 TMEM170BQ5T4T1 132 aa8.8□□□□□ -1
MBD1-220ENST00000589758 TRAV12-1A0A0B4J245 112 aa8.79□□□□□ -1
MBD1-220ENST00000589758 GAGE2EQ4V326 116 aa8.79□□□□□ -1
MBD1-220ENST00000589758 GAGE2DQ9UEU5 116 aa8.79□□□□□ -1
MBD1-220ENST00000589758 FAM168BA1KXE4 195 aa8.78□□□□□ -1
MBD1-220ENST00000589758 NDUFC2-KCTD14E9PQ53 114 aa8.78□□□□□ -1
MBD1-220ENST00000589758 IGLV7-43P04211 117 aa8.78□□□□□ -1
MBD1-220ENST00000589758 DIRC1Q969H9 104 aa8.78□□□□□ -1
MBD1-220ENST00000589758 F8VRH5 84 aa8.77□□□□□ -1.01
MBD1-220ENST00000589758 FAM19A5Q7Z5A7 132 aaPredicted RBP8.77□□□□□ -1.01
MBD1-220ENST00000589758 HSPB8Q9UJY1 196 aa8.77□□□□□ -1.01
MBD1-220ENST00000589758 CXCL5P42830 114 aa8.76□□□□□ -1.01
MBD1-220ENST00000589758 ODF1Q14990 250 aa8.76□□□□□ -1.01
MBD1-220ENST00000589758 IGLV5-39A0A0G2JS06 123 aa8.74□□□□□ -1.01
MBD1-220ENST00000589758 M0QXV9 152 aa8.74□□□□□ -1.01
MBD1-220ENST00000589758 UBE2BP63146 152 aa8.74□□□□□ -1.01
MBD1-220ENST00000589758 H0Y9J4 135 aa8.73□□□□□ -1.01
MBD1-220ENST00000589758 KRTAP11-1Q8IUC1 163 aa8.73□□□□□ -1.01
MBD1-220ENST00000589758 KRTAP7-1Q8IUC3 87 aa8.73□□□□□ -1.01
MBD1-220ENST00000589758 PMCHL2Q9BQD1 86 aa8.73□□□□□ -1.01
MBD1-220ENST00000589758 TMEM223A0PJW6 202 aa8.72□□□□□ -1.01
MBD1-220ENST00000589758 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
MBD1-220ENST00000589758 MAP1LC3CQ9BXW4 147 aa8.72□□□□□ -1.01
MBD1-220ENST00000589758 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.02
MBD1-220ENST00000589758 XAGE1AQ9HD64 81 aa8.71□□□□□ -1.02
MBD1-220ENST00000589758 DPM2O94777 84 aa8.69□□□□□ -1.02
MBD1-220ENST00000589758 PFN2P35080 140 aa8.69□□□□□ -1.02
MBD1-220ENST00000589758 PRR26Q8N8Z3 221 aa8.69□□□□□ -1.02
MBD1-220ENST00000589758 LRP2P98164 4655 aa8.68□□□□□ -1.02
MBD1-220ENST00000589758 IGLV1-50A0A075B6I6 118 aa8.68□□□□□ -1.02
MBD1-220ENST00000589758 PLNP26678 52 aa8.68□□□□□ -1.02
MBD1-220ENST00000589758 COA6Q5JTJ3 125 aaKnown RBP8.68□□□□□ -1.02
MBD1-220ENST00000589758 SYS1-DBNDD2H3BUS1 97 aa8.67□□□□□ -1.02
MBD1-220ENST00000589758 IGKCP01834 107 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms