RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 LINC00242Q5T6M2 205 aa2.42□□□□□ -2.02
LINC01539-203ENST00000589447 C3orf56Q8N813 242 aa2.42□□□□□ -2.02
LINC01539-203ENST00000589447 SPATA3Q8NHX4 192 aa2.42□□□□□ -2.02
LINC01539-203ENST00000589447 SMCR5Q8TEV8 140 aa2.42□□□□□ -2.02
LINC01539-203ENST00000589447 LINC00476Q8WZB0 136 aa2.42□□□□□ -2.02
LINC01539-203ENST00000589447 ESM1Q9NQ30 184 aa2.42□□□□□ -2.02
LINC01539-203ENST00000589447 CDKN2A-AS1Q9UH64 79 aa2.42□□□□□ -2.02
LINC01539-203ENST00000589447 PKD1L1Q8TDX9 2849 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.41□□□□□ -2.02
LINC01539-203ENST00000589447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.41□□□□□ -2.02
LINC01539-203ENST00000589447 IGLV9-49A0A0B4J1Y8 123 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 hADV29S1A0JD25 119 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 IGKV2-29A2NJV5 120 aaPredicted RBP2.41□□□□□ -2.02
LINC01539-203ENST00000589447 RBMY1BA6NDE4 496 aaKnown RBP2.41□□□□□ -2.02
LINC01539-203ENST00000589447 A6NDX4 124 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 RBMY1EA6NEQ0 496 aaKnown RBP2.41□□□□□ -2.02
LINC01539-203ENST00000589447 NDUFC2-KCTD14E9PQ53 114 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 H3BUX3 64 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 INSP01308 110 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 IGKV3-20P01619 116 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 IGHV3-53P01767 116 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 RBMY1DP0C7P1 496 aaKnown RBP2.41□□□□□ -2.02
LINC01539-203ENST00000589447 RBMY1A1P0DJD3 496 aaKnown RBP2.41□□□□□ -2.02
LINC01539-203ENST00000589447 RBMY1CP0DJD4 496 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 SLURP1P55000 103 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 SYNJ2BPP57105 145 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 LMO4P61968 165 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 LY6EQ16553 131 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 RNASE13Q5GAN3 156 aaKnown RBP2.41□□□□□ -2.02
LINC01539-203ENST00000589447 CEMP1Q6PRD7 247 aaPredicted RBP2.41□□□□□ -2.02
LINC01539-203ENST00000589447 SERP2Q8N6R1 65 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 C2orf48Q96LS8 159 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 LINC00467Q9BRT7 94 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 BPESC1Q9GZL8 116 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 ANK2Q01484 3957 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 NACAE9PAV3 2078 aa2.41□□□□□ -2.02
LINC01539-203ENST00000589447 TGP01266 2768 aa2.4□□□□□ -2.02
LINC01539-203ENST00000589447 IGHV3-73A0A0B4J1V6 119 aa2.4□□□□□ -2.03
LINC01539-203ENST00000589447 TRAV13-1A0A0B4J241 112 aa2.4□□□□□ -2.03
LINC01539-203ENST00000589447 TRBV10-1A0A0K0K1A3 114 aa2.4□□□□□ -2.03
LINC01539-203ENST00000589447 A0A1W2PPR1 153 aa2.4□□□□□ -2.03
LINC01539-203ENST00000589447 SMIM1B2RUZ4 78 aa2.4□□□□□ -2.03
LINC01539-203ENST00000589447 JMJD7-PLA2G4BH0Y9G9 81 aa2.4□□□□□ -2.03
LINC01539-203ENST00000589447 UBE2L6O14933 153 aa2.4□□□□□ -2.03
LINC01539-203ENST00000589447 NDUFC2O95298 119 aa2.4□□□□□ -2.03
LINC01539-203ENST00000589447 RPL36AP83881 106 aaKnown RBP2.4□□□□□ -2.03
LINC01539-203ENST00000589447 RPL36ALQ969Q0 106 aaKnown RBP2.4□□□□□ -2.03
LINC01539-203ENST00000589447 FAM104AQ969W3 186 aa2.4□□□□□ -2.03
LINC01539-203ENST00000589447 ZNF625Q96I27 306 aaPredicted RBP2.4□□□□□ -2.03
LINC01539-203ENST00000589447 SMR3AQ99954 134 aa2.4□□□□□ -2.03
LINC01539-203ENST00000589447 ORMDL1Q9P0S3 153 aa2.4□□□□□ -2.03
LINC01539-203ENST00000589447 KLK5Q9Y337 293 aaPredicted RBP2.4□□□□□ -2.03
LINC01539-203ENST00000589447 MGAM2Q2M2H8 2515 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 ANK3Q12955 4377 aaKnown RBP2.39□□□□□ -2.03
LINC01539-203ENST00000589447 IGHV3OR16-12A0A075B7B8 117 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 IGHV3OR16-10A0A075B7F0 116 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 LOC100131303A0A0U1RQF7 123 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 LOC107984640A0A0U1RRK4 108 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 A8MTW9 85 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 K7EQD1 137 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 BCE1O60756 84 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 PSMB8P28062 276 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 PROK1P58294 105 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 RBMY1FQ15415 496 aaKnown RBP2.39□□□□□ -2.03
LINC01539-203ENST00000589447 SOSTDC1Q6X4U4 206 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 BRD3OSQ6XYD6 125 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 Q8N2B8 174 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 MPLKIPQ8TAP9 179 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 COX7B2Q8TF08 81 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 DPH3Q96FX2 82 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 UBE2E2Q96LR5 201 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 OBSCN-AS1Q96MR7 158 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 FAM218AQ96MZ4 157 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 SND1-IT1Q9HBX3 110 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 C14orf132Q9NPU4 83 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 PRO0628Q9UI54 55 aa2.39□□□□□ -2.03
LINC01539-203ENST00000589447 IGHV3-38A0A0C4DH36 116 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 IGHV4-61A0A0C4DH41 118 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 IGKV3D-7A0A0C4DH55 119 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 TRBV10-3A0A0K0K1G6 114 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 FAM236DA0A1B0GTK5 79 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 KNCNA6PVL3 124 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 KRTAP9-7A8MTY7 169 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 IBA57-AS1B1ANH7 110 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 IGHV4-59P01825 116 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 IGHV4-38-2P0DP08 117 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 FAM236CP0DP71 79 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 HTN1P15515 57 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 DEFB131AP59861 70 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 COX6A2Q02221 97 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 LCE5AQ5TCM9 118 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 C11orf72Q8NBR9 251 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 UPK3BQ9BT76 320 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 TMEM243Q9BU79 118 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 VWFP04275 2813 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 HIVEP2P31629 2446 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 WNK2Q9Y3S1 2297 aa2.38□□□□□ -2.03
LINC01539-203ENST00000589447 A0A087WYN8 130 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 IGLV5-52A0A0A0MRZ9 124 aa2.37□□□□□ -2.03
LINC01539-203ENST00000589447 H3BQ85 93 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms