RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 LINC00862A6NCI5 91 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 SMIM1B2RUZ4 78 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 F8W036 122 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 TSPAN13O95857 204 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 TLX1NBP0CAT3 122 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 CKS1BP61024 79 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 LBHQ53QV2 105 aaPredicted RBP3.37□□□□□ -1.87
LINC01539-202ENST00000589293 NOTCH2NLQ7Z3S9 236 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 C20orf78Q9BR46 151 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 C2orf88Q9BSF0 95 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 OSTCQ9NRP0 149 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 NAT8BQ9UHF3 227 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 CARHSP1Q9Y2V2 147 aaKnown RBP3.37□□□□□ -1.87
LINC01539-202ENST00000589293 FAM168BA1KXE4 195 aa3.36□□□□□ -1.87
LINC01539-202ENST00000589293 NDUFC2-KCTD14E9PQ53 114 aa3.36□□□□□ -1.87
LINC01539-202ENST00000589293 NUPR1O60356 82 aa3.36□□□□□ -1.87
LINC01539-202ENST00000589293 UNQ6190/PRO20217Q6UXQ8 127 aa3.36□□□□□ -1.87
LINC01539-202ENST00000589293 Q6ZN92 141 aa3.36□□□□□ -1.87
LINC01539-202ENST00000589293 LITAFQ99732 161 aa3.36□□□□□ -1.87
LINC01539-202ENST00000589293 SMDT1Q9H4I9 107 aa3.36□□□□□ -1.87
LINC01539-202ENST00000589293 A0A087X002 238 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 IGHV3OR16-9A0A0B4J2B5 98 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 ZNF861PO60384 105 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 CRYGAP11844 174 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 RPL28P46779 137 aaKnown RBP3.35□□□□□ -1.87
LINC01539-202ENST00000589293 RPL39P62891 51 aaKnown RBP3.35□□□□□ -1.87
LINC01539-202ENST00000589293 MRPS36P82909 103 aaKnown RBP3.35□□□□□ -1.87
LINC01539-202ENST00000589293 MRPL51Q4U2R6 128 aaKnown RBP3.35□□□□□ -1.87
LINC01539-202ENST00000589293 C6orf226Q5I0X4 101 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 FAM104BQ5XKR9 115 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 TEX43Q6ZNM6 134 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 LINC01551Q86U37 167 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 TYMSOSQ8TAI1 123 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 SMIM2Q9BVW6 85 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 TOMM7Q9P0U1 55 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 C6orf48Q9UBA6 75 aa3.35□□□□□ -1.87
LINC01539-202ENST00000589293 PPBPP02775 128 aa3.34□□□□□ -1.87
LINC01539-202ENST00000589293 RPL32P62910 135 aaKnown RBP3.34□□□□□ -1.87
LINC01539-202ENST00000589293 ADIRFQ15847 76 aa3.34□□□□□ -1.87
LINC01539-202ENST00000589293 FAM74A3Q4VXF1 159 aa3.34□□□□□ -1.87
LINC01539-202ENST00000589293 ALKAL2Q6UX46 152 aa3.34□□□□□ -1.87
LINC01539-202ENST00000589293 TCTE3Q8IZS6 198 aa3.34□□□□□ -1.87
LINC01539-202ENST00000589293 TMEM141Q96I45 108 aa3.34□□□□□ -1.87
LINC01539-202ENST00000589293 PRAC1Q96KF2 57 aa3.34□□□□□ -1.87
LINC01539-202ENST00000589293 TRBV24-1A0A075B6N3 115 aa3.33□□□□□ -1.88
LINC01539-202ENST00000589293 D6R8Y8 96 aa3.33□□□□□ -1.88
LINC01539-202ENST00000589293 KRTAP1-4P0C5Y4 121 aa3.33□□□□□ -1.88
LINC01539-202ENST00000589293 MT3P25713 68 aa3.33□□□□□ -1.88
LINC01539-202ENST00000589293 SEC11AP67812 179 aa3.33□□□□□ -1.88
LINC01539-202ENST00000589293 KIAA1644Q3SXP7 199 aa3.33□□□□□ -1.88
LINC01539-202ENST00000589293 C2orf82Q6UX34 121 aa3.33□□□□□ -1.88
LINC01539-202ENST00000589293 ORMDL3Q8N138 153 aa3.33□□□□□ -1.88
LINC01539-202ENST00000589293 ALKBH7Q9BT30 221 aaPredicted RBP3.33□□□□□ -1.88
LINC01539-202ENST00000589293 VCX2Q9H322 139 aa3.33□□□□□ -1.88
LINC01539-202ENST00000589293 PYGO1Q9Y3Y4 419 aa3.33□□□□□ -1.88
LINC01539-202ENST00000589293 V9GYV3 84 aa3.33□□□□□ -1.88
LINC01539-202ENST00000589293 G0S2P27469 103 aa3.32□□□□□ -1.88
LINC01539-202ENST00000589293 UBE2AP49459 152 aa3.32□□□□□ -1.88
LINC01539-202ENST00000589293 MRPL54Q6P161 138 aaKnown RBP3.32□□□□□ -1.88
LINC01539-202ENST00000589293 TMEM136Q6ZRR5 245 aa3.32□□□□□ -1.88
LINC01539-202ENST00000589293 MRPL55Q7Z7F7 128 aaKnown RBP3.32□□□□□ -1.88
LINC01539-202ENST00000589293 LINC01561Q8N1V8 128 aa3.32□□□□□ -1.88
LINC01539-202ENST00000589293 LINC00469Q8N7U9 141 aa3.32□□□□□ -1.88
LINC01539-202ENST00000589293 NKAPP1Q8N9T2 125 aa3.32□□□□□ -1.88
LINC01539-202ENST00000589293 PRELID3AQ96N28 172 aa3.32□□□□□ -1.88
LINC01539-202ENST00000589293 MAP1LC3AQ9H492 121 aa3.32□□□□□ -1.88
LINC01539-202ENST00000589293 GEMIN7Q9H840 131 aaKnown RBP3.32□□□□□ -1.88
LINC01539-202ENST00000589293 NAT8Q9UHE5 227 aa3.32□□□□□ -1.88
LINC01539-202ENST00000589293 CYSLTR1Q9Y271 337 aa3.32□□□□□ -1.88
LINC01539-202ENST00000589293 C22orf24Q9Y442 160 aa3.32□□□□□ -1.88
LINC01539-202ENST00000589293 IGLV4-3A0A075B6K6 122 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 IGKV2D-26A0A0A0MRZ7 120 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 LOC389332A0A1B0GUA5 103 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 SMIM27A0A1W2PRY6 76 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 BCE1O60756 84 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 NPYP01303 97 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 SRP19P09132 144 aaKnown RBP3.31□□□□□ -1.88
LINC01539-202ENST00000589293 CXCL5P42830 114 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 RPL23P62829 140 aaKnown RBP3.31□□□□□ -1.88
LINC01539-202ENST00000589293 HERVK_113P63121 156 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 C9orf129Q5T035 196 aaKnown RBP3.31□□□□□ -1.88
LINC01539-202ENST00000589293 LINC00242Q5T6M2 205 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 AKAP14Q86UN6 197 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 LPAP08519 4548 aa3.31□□□□□ -1.88
LINC01539-202ENST00000589293 F8VRH5 84 aa3.3□□□□□ -1.88
LINC01539-202ENST00000589293 KIAA0087Q14695 138 aa3.3□□□□□ -1.88
LINC01539-202ENST00000589293 PEA15Q15121 130 aa3.3□□□□□ -1.88
LINC01539-202ENST00000589293 ORMDL2Q53FV1 153 aa3.3□□□□□ -1.88
LINC01539-202ENST00000589293 Q8IZM0 81 aa3.3□□□□□ -1.88
LINC01539-202ENST00000589293 LINC00304Q8N9R0 145 aa3.3□□□□□ -1.88
LINC01539-202ENST00000589293 TP73-AS1Q9UF72 201 aa3.3□□□□□ -1.88
LINC01539-202ENST00000589293 LAMTOR2Q9Y2Q5 125 aa3.3□□□□□ -1.88
LINC01539-202ENST00000589293 RPL37AP8A6NKH3 93 aa3.29□□□□□ -1.88
LINC01539-202ENST00000589293 C2orf66Q6UXQ4 117 aa3.29□□□□□ -1.88
LINC01539-202ENST00000589293 LINC00173Q6ZV60 143 aa3.29□□□□□ -1.88
LINC01539-202ENST00000589293 ATP5L2Q7Z4Y8 100 aa3.29□□□□□ -1.88
LINC01539-202ENST00000589293 IGLV7-46A0A075B6I9 117 aa3.28□□□□□ -1.88
LINC01539-202ENST00000589293 K7EMI3 77 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms