RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 C3orf84H3BNL1 204 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 LECT2O14960 151 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 FCER1GP30273 86 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 FAM104BQ5XKR9 115 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 C2orf91Q6ZV80 131 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 COX8CQ7Z4L0 72 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 SH2D6Q7Z4S9 175 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 ORMDL3Q8N138 153 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 C16orf74Q96GX8 76 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 C11orf68Q9H3H3 251 aaKnown RBP2.24□□□□□ -2.05
ZNF540-207ENST00000589285 DPH3P1Q9H4G8 78 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 LENEPQ9Y5L5 61 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 A0A1B0GVY2 172 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 WFDC2Q14508 124 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 MORN3Q6PF18 240 aaPredicted RBP2.24□□□□□ -2.05
ZNF540-207ENST00000589285 FAM19A1Q7Z5A9 133 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 C10orf126Q8N4M7 172 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 RASL10AQ92737 203 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 RNF185Q96GF1 192 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 TP53TG1Q9Y2A0 90 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 TRAV13-1A0A0B4J241 112 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 SNCGO76070 127 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 APOMO95445 188 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 HLA-DQA1P01909 254 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 ATP5G1P05496 136 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 OR5AL1P0C617 328 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 LINC00526Q96FQ7 95 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 LY96Q9Y6Y9 160 aa2.24□□□□□ -2.05
ZNF540-207ENST00000589285 TRAV2A0A0B4J234 112 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 FAM236AA0A1B0GUQ0 79 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 FAM236BA0A1B0GV22 79 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 CMC4P56277 68 aaPredicted RBP2.23□□□□□ -2.05
ZNF540-207ENST00000589285 HERVK_113P63121 156 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 CARD19Q96LW7 228 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 C9orf85Q96MD7 179 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 U3KQK5 164 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 CMYA5Q8N3K9 4069 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 A0A1B0GXF2 115 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 LY6G6CO95867 125 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 COX8AP10176 69 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 DAZ2Q13117 558 aaKnown RBP2.23□□□□□ -2.05
ZNF540-207ENST00000589285 C9orf153Q5TBE3 101 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 DAZ4Q86SG3 579 aaKnown RBP2.23□□□□□ -2.05
ZNF540-207ENST00000589285 UBE2DNLQ8IWF7 75 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 RAB37Q96AX2 223 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 VSIG2Q96IQ7 327 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 TMEM70Q9BUB7 260 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 TMEM191AQ9H0A3 160 aa2.23□□□□□ -2.05
ZNF540-207ENST00000589285 DAZ3Q9NR90 486 aaKnown RBP2.23□□□□□ -2.05
ZNF540-207ENST00000589285 IGLV4-3A0A075B6K6 122 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 A0A0U1RQV1 116 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 A0A1B0GWB2 263 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 A8MWV9 139 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 M0QY20 66 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 MIFP14174 115 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 LINC00315P59091 139 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 WFDC10BQ8IUB3 73 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 KIR2DL4Q99706 377 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 SYS1-DBNDD2H3BUS1 97 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 FGF6P10767 208 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 CD164Q04900 197 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 TTTY13Q9BZ97 58 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 DHRS4-AS1Q9P1J3 65 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 KLK12Q9UKR0 248 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 KLK5Q9Y337 293 aaPredicted RBP2.22□□□□□ -2.05
ZNF540-207ENST00000589285 TRBV7-3A0A075B6L6 115 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 UBE2L6O14933 153 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 OXTP01178 125 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 ANGP03950 147 aaKnown RBP2.22□□□□□ -2.05
ZNF540-207ENST00000589285 RPL13AP40429 203 aaKnown RBP2.22□□□□□ -2.05
ZNF540-207ENST00000589285 ATP6V0E2Q8NHE4 81 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 UBE2WQ96B02 151 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 ZNF625Q96I27 306 aaPredicted RBP2.22□□□□□ -2.05
ZNF540-207ENST00000589285 ODF3Q96PU9 254 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 LINC00467Q9BRT7 94 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 TOMM7Q9P0U1 55 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 PRO0255Q9UI72 69 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 KIF25-AS1Q9Y6Z4 181 aa2.22□□□□□ -2.05
ZNF540-207ENST00000589285 IGHV1-24A0A0C4DH33 117 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 TRBV6-1A0A0K0K1D8 114 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 LEPROTL1O95214 131 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 XCL1P47992 114 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 CACNG7P62955 275 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 Q6Q795 121 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 C2orf66Q6UXQ4 117 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 NTM-AS1Q6ZSK4 140 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 TM2D3Q9BRN9 247 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 SMIM2Q9BVW6 85 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 HUWE1Q7Z6Z7 4374 aaKnown RBP2.21□□□□□ -2.06
ZNF540-207ENST00000589285 IGLV4-60A0A075B6I1 120 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 TRAV4A0A0B4J268 109 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 SRSF9Q13242 221 aaKnown RBP eCLIP2.21□□□□□ -2.06
ZNF540-207ENST00000589285 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 RHOHQ15669 191 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 ESRGQ1W209 222 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 LINC01545Q5VT33 79 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 Q5XG85 94 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 ATP5L2Q7Z4Y8 100 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 SCGB3A1Q96QR1 104 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms