RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 BOD1L2Q8IYS8 172 aa9.55□□□□□ -0.88
NPC1-207ENST00000588867 GVQW2A0A096LPI5 108 aaPredicted RBP9.54□□□□□ -0.88
NPC1-207ENST00000588867 NDUFA1O15239 70 aa9.54□□□□□ -0.88
NPC1-207ENST00000588867 SCGB1D4Q6XE38 83 aa9.53□□□□□ -0.88
NPC1-207ENST00000588867 NTN5Q8WTR8 489 aaPredicted RBP9.53□□□□□ -0.88
NPC1-207ENST00000588867 UQCR10Q9UDW1 63 aa9.53□□□□□ -0.88
NPC1-207ENST00000588867 CAMK2N2Q96S95 79 aa9.53□□□□□ -0.88
NPC1-207ENST00000588867 CBY1Q9Y3M2 126 aa9.53□□□□□ -0.88
NPC1-207ENST00000588867 LRCOL1A6NCL2 159 aa9.52□□□□□ -0.89
NPC1-207ENST00000588867 CXCL5P42830 114 aa9.52□□□□□ -0.89
NPC1-207ENST00000588867 UNQ6190/PRO20217Q6UXQ8 127 aa9.52□□□□□ -0.89
NPC1-207ENST00000588867 DLEU1O43261 78 aa9.51□□□□□ -0.89
NPC1-207ENST00000588867 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
NPC1-207ENST00000588867 EREGO14944 169 aa9.51□□□□□ -0.89
NPC1-207ENST00000588867 C2orf48Q96LS8 159 aa9.51□□□□□ -0.89
NPC1-207ENST00000588867 MIEN1Q9BRT3 115 aa9.51□□□□□ -0.89
NPC1-207ENST00000588867 A0A0J9YXY3 114 aa9.5□□□□□ -0.89
NPC1-207ENST00000588867 M0R143 59 aa9.5□□□□□ -0.89
NPC1-207ENST00000588867 HERV-K104P63124 156 aa9.5□□□□□ -0.89
NPC1-207ENST00000588867 C14orf177Q52M58 125 aa9.5□□□□□ -0.89
NPC1-207ENST00000588867 MEIG1Q5JSS6 88 aa9.5□□□□□ -0.89
NPC1-207ENST00000588867 SFTA2Q6UW10 78 aa9.5□□□□□ -0.89
NPC1-207ENST00000588867 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.49□□□□□ -0.89
NPC1-207ENST00000588867 A0A0U1RRA0 63 aa9.49□□□□□ -0.89
NPC1-207ENST00000588867 A0A087WTM6 91 aa9.49□□□□□ -0.89
NPC1-207ENST00000588867 SYCNQ0VAF6 134 aa9.49□□□□□ -0.89
NPC1-207ENST00000588867 Q6ZRU5 148 aa9.49□□□□□ -0.89
NPC1-207ENST00000588867 RTL8CO15255 209 aa9.48□□□□□ -0.89
NPC1-207ENST00000588867 SLPIP03973 132 aa9.48□□□□□ -0.89
NPC1-207ENST00000588867 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
NPC1-207ENST00000588867 SNHG12Q9BXW3 62 aa9.48□□□□□ -0.89
NPC1-207ENST00000588867 DNAH10Q8IVF4 4471 aa9.48□□□□□ -0.89
NPC1-207ENST00000588867 PFN2P35080 140 aa9.48□□□□□ -0.89
NPC1-207ENST00000588867 F8WDY8 70 aa9.47□□□□□ -0.89
NPC1-207ENST00000588867 HNRNPA3P51991 378 aaKnown RBP9.47□□□□□ -0.89
NPC1-207ENST00000588867 TNP2Q05952 138 aa9.47□□□□□ -0.89
NPC1-207ENST00000588867 CIRBPQ14011 172 aaKnown RBP9.47□□□□□ -0.89
NPC1-207ENST00000588867 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
NPC1-207ENST00000588867 HYDINQ4G0P3 5121 aa9.47□□□□□ -0.89
NPC1-207ENST00000588867 SMIM13P0DJ93 91 aa9.46□□□□□ -0.89
NPC1-207ENST00000588867 C2orf91Q6ZV80 131 aa9.46□□□□□ -0.89
NPC1-207ENST00000588867 Q8N814 137 aa9.46□□□□□ -0.89
NPC1-207ENST00000588867 CARD19Q96LW7 228 aa9.46□□□□□ -0.89
NPC1-207ENST00000588867 ERG28Q9UKR5 140 aa9.46□□□□□ -0.89
NPC1-207ENST00000588867 LINC00158P58513 81 aa9.46□□□□□ -0.9
NPC1-207ENST00000588867 DNAH6Q9C0G6 4158 aa9.46□□□□□ -0.9
NPC1-207ENST00000588867 TRBV30A0A0K0K1B3 111 aa9.45□□□□□ -0.9
NPC1-207ENST00000588867 DAND5Q8N907 189 aa9.44□□□□□ -0.9
NPC1-207ENST00000588867 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.44□□□□□ -0.9
NPC1-207ENST00000588867 SRSF9Q13242 221 aaKnown RBP eCLIP9.44□□□□□ -0.9
NPC1-207ENST00000588867 ADAMTSL4-AS1Q5T5F5 129 aa9.44□□□□□ -0.9
NPC1-207ENST00000588867 HIGD1BQ9P298 99 aa9.44□□□□□ -0.9
NPC1-207ENST00000588867 TMEM238C9JI98 176 aa9.43□□□□□ -0.9
NPC1-207ENST00000588867 LITAFQ99732 161 aa9.43□□□□□ -0.9
NPC1-207ENST00000588867 TIMM17BO60830 172 aa9.42□□□□□ -0.9
NPC1-207ENST00000588867 CNBPP62633 177 aaKnown RBP9.42□□□□□ -0.9
NPC1-207ENST00000588867 COX17Q14061 63 aa9.42□□□□□ -0.9
NPC1-207ENST00000588867 HIST1H4GQ99525 98 aa9.42□□□□□ -0.9
NPC1-207ENST00000588867 NPC2P61916 151 aa9.41□□□□□ -0.9
NPC1-207ENST00000588867 MIR7-3HGQ8N6C7 128 aa9.41□□□□□ -0.9
NPC1-207ENST00000588867 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.9
NPC1-207ENST00000588867 SACSQ9NZJ4 4579 aa9.41□□□□□ -0.9
NPC1-207ENST00000588867 DNAH2Q9P225 4427 aa9.4□□□□□ -0.9
NPC1-207ENST00000588867 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
NPC1-207ENST00000588867 SPANXB1Q9NS25 103 aaPredicted RBP9.4□□□□□ -0.9
NPC1-207ENST00000588867 PCP4P48539 62 aa9.39□□□□□ -0.91
NPC1-207ENST00000588867 NDUFC2-KCTD14E9PQ53 114 aa9.38□□□□□ -0.91
NPC1-207ENST00000588867 RPL18AQ02543 176 aaKnown RBP9.38□□□□□ -0.91
NPC1-207ENST00000588867 LINC01620Q4KN68 170 aa9.38□□□□□ -0.91
NPC1-207ENST00000588867 GAGE2EQ4V326 116 aa9.38□□□□□ -0.91
NPC1-207ENST00000588867 SPANXDQ9BXN6 97 aa9.38□□□□□ -0.91
NPC1-207ENST00000588867 SPANXCQ9NY87 97 aa9.38□□□□□ -0.91
NPC1-207ENST00000588867 GAGE2DQ9UEU5 116 aa9.38□□□□□ -0.91
NPC1-207ENST00000588867 MUSTN1Q8IVN3 82 aa9.38□□□□□ -0.91
NPC1-207ENST00000588867 HSD52Q0P140 79 aa9.37□□□□□ -0.91
NPC1-207ENST00000588867 C21orf62-AS1Q17RA5 79 aa9.37□□□□□ -0.91
NPC1-207ENST00000588867 Q6ZRP5 223 aa9.37□□□□□ -0.91
NPC1-207ENST00000588867 Q6ZVH6 145 aa9.37□□□□□ -0.91
NPC1-207ENST00000588867 C9orf163Q8N9P6 203 aa9.37□□□□□ -0.91
NPC1-207ENST00000588867 KMT2CQ8NEZ4 4911 aaKnown RBP9.37□□□□□ -0.91
NPC1-207ENST00000588867 IGLV5-52A0A0A0MRZ9 124 aa9.36□□□□□ -0.91
NPC1-207ENST00000588867 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
NPC1-207ENST00000588867 GCSHP23434 173 aa9.36□□□□□ -0.91
NPC1-207ENST00000588867 TAL2Q16559 108 aa9.36□□□□□ -0.91
NPC1-207ENST00000588867 LINC00336Q6ZUF6 198 aa9.36□□□□□ -0.91
NPC1-207ENST00000588867 LINC00308Q8TCZ7 52 aa9.36□□□□□ -0.91
NPC1-207ENST00000588867 SND1-IT1Q9HBX3 110 aa9.36□□□□□ -0.91
NPC1-207ENST00000588867 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
NPC1-207ENST00000588867 EIF4EBP3O60516 100 aaPredicted RBP9.36□□□□□ -0.91
NPC1-207ENST00000588867 GAGE2BQ13066 116 aa9.36□□□□□ -0.91
NPC1-207ENST00000588867 TLX1NBP0CAT3 122 aa9.35□□□□□ -0.91
NPC1-207ENST00000588867 CEND1Q8N111 149 aa9.35□□□□□ -0.91
NPC1-207ENST00000588867 IFITM1P13164 125 aa9.34□□□□□ -0.91
NPC1-207ENST00000588867 HINT1P49773 126 aaPredicted RBP9.34□□□□□ -0.91
NPC1-207ENST00000588867 KRTAP10-2P60368 255 aa9.34□□□□□ -0.91
NPC1-207ENST00000588867 SOSTDC1Q6X4U4 206 aa9.34□□□□□ -0.91
NPC1-207ENST00000588867 COL5A1-AS1Q5SY13 56 aa9.33□□□□□ -0.92
NPC1-207ENST00000588867 COPS9Q8WXC6 57 aa9.33□□□□□ -0.92
NPC1-207ENST00000588867 PTTG1IPP53801 180 aa9.32□□□□□ -0.92
NPC1-207ENST00000588867 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms