RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 PACRGQ96M98 296 aaPredicted RBP8.96□□□□□ -0.98
DDX39A-208ENST00000588692 PRSS2P07478 247 aa8.95□□□□□ -0.98
DDX39A-208ENST00000588692 ANKRD39Q53RE8 183 aa8.95□□□□□ -0.98
DDX39A-208ENST00000588692 SCGB3A1Q96QR1 104 aa8.95□□□□□ -0.98
DDX39A-208ENST00000588692 C2orf82Q6UX34 121 aa8.94□□□□□ -0.98
DDX39A-208ENST00000588692 Q8IZM0 81 aa8.94□□□□□ -0.98
DDX39A-208ENST00000588692 MRPL18Q9H0U6 180 aaKnown RBP8.94□□□□□ -0.98
DDX39A-208ENST00000588692 GEMIN7Q9H840 131 aaKnown RBP8.94□□□□□ -0.98
DDX39A-208ENST00000588692 NDUFC2-KCTD14E9PQ53 114 aa8.93□□□□□ -0.98
DDX39A-208ENST00000588692 FABP9Q0Z7S8 132 aa8.93□□□□□ -0.98
DDX39A-208ENST00000588692 REG3GQ6UW15 175 aa8.93□□□□□ -0.98
DDX39A-208ENST00000588692 LINC01600Q96MT4 127 aa8.93□□□□□ -0.98
DDX39A-208ENST00000588692 COLCA2A8K830 154 aa8.92□□□□□ -0.98
DDX39A-208ENST00000588692 CKS1BP61024 79 aa8.92□□□□□ -0.98
DDX39A-208ENST00000588692 SRSF9Q13242 221 aaKnown RBP eCLIP8.92□□□□□ -0.98
DDX39A-208ENST00000588692 GAGE2EQ4V326 116 aa8.92□□□□□ -0.98
DDX39A-208ENST00000588692 FA2HQ7L5A8 372 aa8.92□□□□□ -0.98
DDX39A-208ENST00000588692 PHF5AQ7RTV0 110 aaKnown RBP8.92□□□□□ -0.98
DDX39A-208ENST00000588692 TOMM7Q9P0U1 55 aa8.92□□□□□ -0.98
DDX39A-208ENST00000588692 GAGE2DQ9UEU5 116 aa8.92□□□□□ -0.98
DDX39A-208ENST00000588692 CDKN2A-AS1Q9UH64 79 aa8.92□□□□□ -0.98
DDX39A-208ENST00000588692 PSORS1C2Q9UIG4 136 aa8.92□□□□□ -0.98
DDX39A-208ENST00000588692 RAB5BP61020 215 aa8.91□□□□□ -0.98
DDX39A-208ENST00000588692 C6orf226Q5I0X4 101 aa8.91□□□□□ -0.98
DDX39A-208ENST00000588692 PLA2G2DQ9UNK4 145 aa8.91□□□□□ -0.98
DDX39A-208ENST00000588692 HMCN2Q8NDA2 5059 aa8.9□□□□□ -0.98
DDX39A-208ENST00000588692 FAM168BA1KXE4 195 aa8.9□□□□□ -0.98
DDX39A-208ENST00000588692 TINCRA0A1B0GVN0 87 aa8.89□□□□□ -0.99
DDX39A-208ENST00000588692 CXCL5P42830 114 aa8.89□□□□□ -0.99
DDX39A-208ENST00000588692 FAM19A5Q7Z5A7 132 aaPredicted RBP8.89□□□□□ -0.99
DDX39A-208ENST00000588692 IGLV5-45A0A087WSX0 123 aa8.89□□□□□ -0.99
DDX39A-208ENST00000588692 C1orf137Q5JT78 98 aa8.89□□□□□ -0.99
DDX39A-208ENST00000588692 F8VRH5 84 aa8.88□□□□□ -0.99
DDX39A-208ENST00000588692 PMVKQ15126 192 aa8.88□□□□□ -0.99
DDX39A-208ENST00000588692 CST9LQ9H4G1 147 aa8.88□□□□□ -0.99
DDX39A-208ENST00000588692 SMIM1B2RUZ4 78 aa8.87□□□□□ -0.99
DDX39A-208ENST00000588692 M0QXV9 152 aa8.87□□□□□ -0.99
DDX39A-208ENST00000588692 S100A12P80511 92 aa8.87□□□□□ -0.99
DDX39A-208ENST00000588692 PDZD11Q5EBL8 140 aa8.87□□□□□ -0.99
DDX39A-208ENST00000588692 C9orf129Q5T035 196 aaKnown RBP8.87□□□□□ -0.99
DDX39A-208ENST00000588692 TRAPPC1Q9Y5R8 145 aa8.87□□□□□ -0.99
DDX39A-208ENST00000588692 KRTAP7-1Q8IUC3 87 aa8.86□□□□□ -0.99
DDX39A-208ENST00000588692 C18orf32Q8TCD1 76 aa8.85□□□□□ -0.99
DDX39A-208ENST00000588692 IGLV7-43P04211 117 aa8.84□□□□□ -0.99
DDX39A-208ENST00000588692 UBE2BP63146 152 aa8.84□□□□□ -0.99
DDX39A-208ENST00000588692 ODF1Q14990 250 aa8.84□□□□□ -0.99
DDX39A-208ENST00000588692 COX7B2Q8TF08 81 aa8.84□□□□□ -0.99
DDX39A-208ENST00000588692 YPEL4Q96NS1 127 aa8.84□□□□□ -0.99
DDX39A-208ENST00000588692 A6NJY4 79 aa8.83□□□□□ -1
DDX39A-208ENST00000588692 H3BRM9 83 aa8.83□□□□□ -1
DDX39A-208ENST00000588692 LINC00614P0C842 121 aa8.83□□□□□ -1
DDX39A-208ENST00000588692 TNXBP22105 4242 aa8.83□□□□□ -1
DDX39A-208ENST00000588692 A0A096LNJ9 63 aa8.83□□□□□ -1
DDX39A-208ENST00000588692 HBDP02042 147 aa8.83□□□□□ -1
DDX39A-208ENST00000588692 KRTAP10-8P60410 259 aa8.83□□□□□ -1
DDX39A-208ENST00000588692 KRTAP11-1Q8IUC1 163 aa8.83□□□□□ -1
DDX39A-208ENST00000588692 DIRC1Q969H9 104 aa8.83□□□□□ -1
DDX39A-208ENST00000588692 URB1-AS1Q96HZ7 61 aa8.83□□□□□ -1
DDX39A-208ENST00000588692 XAGE1AQ9HD64 81 aa8.82□□□□□ -1
DDX39A-208ENST00000588692 SPINK8P0C7L1 97 aa8.81□□□□□ -1
DDX39A-208ENST00000588692 IGLC3P0DOY3 106 aa8.81□□□□□ -1
DDX39A-208ENST00000588692 AKR1D1P51857 326 aa8.81□□□□□ -1
DDX39A-208ENST00000588692 LBHQ53QV2 105 aaPredicted RBP8.8□□□□□ -1
DDX39A-208ENST00000588692 H0Y9J4 135 aa8.79□□□□□ -1
DDX39A-208ENST00000588692 ATP5LO75964 103 aa8.79□□□□□ -1
DDX39A-208ENST00000588692 NDUFA6P56556 154 aa8.79□□□□□ -1
DDX39A-208ENST00000588692 TP73-AS1Q9UF72 201 aa8.79□□□□□ -1
DDX39A-208ENST00000588692 C5orf52A6NGY3 159 aa8.78□□□□□ -1
DDX39A-208ENST00000588692 LINC00518Q8N0U6 118 aa8.78□□□□□ -1
DDX39A-208ENST00000588692 C22orf24Q9Y442 160 aa8.78□□□□□ -1
DDX39A-208ENST00000588692 IGLV5-39A0A0G2JS06 123 aa8.77□□□□□ -1
DDX39A-208ENST00000588692 SNRPEP62304 92 aaKnown RBP8.77□□□□□ -1
DDX39A-208ENST00000588692 PMCHL1Q16048 86 aa8.77□□□□□ -1
DDX39A-208ENST00000588692 NUPR1O60356 82 aa8.77□□□□□ -1.01
DDX39A-208ENST00000588692 ZNF22P17026 224 aaPredicted RBP8.77□□□□□ -1.01
DDX39A-208ENST00000588692 MRPL55Q7Z7F7 128 aaKnown RBP8.76□□□□□ -1.01
DDX39A-208ENST00000588692 CHCHD1Q96BP2 118 aaKnown RBP8.76□□□□□ -1.01
DDX39A-208ENST00000588692 BAGE3Q86Y29 109 aa8.75□□□□□ -1.01
DDX39A-208ENST00000588692 SMIM6P0DI80 62 aa8.74□□□□□ -1.01
DDX39A-208ENST00000588692 SFTA2Q6UW10 78 aa8.74□□□□□ -1.01
DDX39A-208ENST00000588692 C11orf86A6NJI1 115 aa8.73□□□□□ -1.01
DDX39A-208ENST00000588692 IGLV1-50A0A075B6I6 118 aa8.72□□□□□ -1.01
DDX39A-208ENST00000588692 IGLV5-37A0A075B6J1 123 aa8.72□□□□□ -1.01
DDX39A-208ENST00000588692 ZNF861PO60384 105 aa8.72□□□□□ -1.01
DDX39A-208ENST00000588692 TRGC2P03986 189 aa8.72□□□□□ -1.01
DDX39A-208ENST00000588692 C12orf57Q99622 126 aa8.72□□□□□ -1.01
DDX39A-208ENST00000588692 TMEM170BQ5T4T1 132 aa8.71□□□□□ -1.01
DDX39A-208ENST00000588692 CHTOPQ9Y3Y2 248 aaKnown RBP8.71□□□□□ -1.01
DDX39A-208ENST00000588692 TRAV12-1A0A0B4J245 112 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 HIST1H2BKO60814 126 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 HIST1H2BJP06899 126 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 HIST1H2BOP23527 126 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 HIST1H2BBP33778 126 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 PFN2P35080 140 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 HIST1H2BDP58876 126 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 HIST1H2BCP62807 126 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 COX17Q14061 63 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 HIST2H2BEQ16778 126 aa8.7□□□□□ -1.02
DDX39A-208ENST00000588692 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms