RNA–Protein interactions for RNA: ENST00000588622.1

PDCD5-206, Transcript of programmed cell death 5, humanhuman

TSL 2

Gene PDCD5, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-206ENST00000588622 C9orf62Q8N4C0 152 aa-1.84□□□□□ -2.7
PDCD5-206ENST00000588622 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.84□□□□□ -2.7
PDCD5-206ENST00000588622 PHLPP1O60346 1717 aa-1.84□□□□□ -2.7
PDCD5-206ENST00000588622 MBD5Q9P267 1494 aa-1.84□□□□□ -2.7
PDCD5-206ENST00000588622 MUC17Q685J3 4493 aa-1.84□□□□□ -2.7
PDCD5-206ENST00000588622 A0A0G2JMZ2 1700 aa-1.85□□□□□ -2.71
PDCD5-206ENST00000588622 ROBO1Q9Y6N7 1651 aa-1.86□□□□□ -2.71
PDCD5-206ENST00000588622 AKAP9Q99996 3911 aa-1.86□□□□□ -2.71
PDCD5-206ENST00000588622 CRIPTQ9P021 101 aa-1.86□□□□□ -2.71
PDCD5-206ENST00000588622 VPS13DQ5THJ4 4388 aa-1.86□□□□□ -2.71
PDCD5-206ENST00000588622 FOCADQ5VW36 1801 aa-1.87□□□□□ -2.71
PDCD5-206ENST00000588622 ADGRL2O95490 1459 aa-1.87□□□□□ -2.71
PDCD5-206ENST00000588622 TCHHQ07283 1943 aa-1.87□□□□□ -2.71
PDCD5-206ENST00000588622 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.87□□□□□ -2.713e-13■■■□□ 19
PDCD5-206ENST00000588622 XRN1Q8IZH2 1706 aaKnown RBP-1.87□□□□□ -2.71
PDCD5-206ENST00000588622 BIRC6Q9NR09 4857 aa-1.87□□□□□ -2.71
PDCD5-206ENST00000588622 NKTRP30414 1462 aaKnown RBP-1.88□□□□□ -2.71
PDCD5-206ENST00000588622 DNAH3Q8TD57 4116 aa-1.88□□□□□ -2.71
PDCD5-206ENST00000588622 A0A1B0GWA3 101 aa-1.88□□□□□ -2.71
PDCD5-206ENST00000588622 OOSP1A8MZH6 123 aa-1.88□□□□□ -2.71
PDCD5-206ENST00000588622 SEC11AP67812 179 aa-1.88□□□□□ -2.71
PDCD5-206ENST00000588622 SPRR2FQ96RM1 72 aa-1.88□□□□□ -2.71
PDCD5-206ENST00000588622 REV3LO60673 3130 aa-1.88□□□□□ -2.71
PDCD5-206ENST00000588622 PRRC2CQ9Y520 2896 aaKnown RBP-1.89□□□□□ -2.71
PDCD5-206ENST00000588622 FGF7P21781 194 aa-1.89□□□□□ -2.71
PDCD5-206ENST00000588622 PLEKHH2Q8IVE3 1493 aa-1.89□□□□□ -2.71
PDCD5-206ENST00000588622 NAIPQ13075 1403 aa-1.9□□□□□ -2.71
PDCD5-206ENST00000588622 FAM223BA6NKX1 122 aa-1.9□□□□□ -2.71
PDCD5-206ENST00000588622 DNAH9Q9NYC9 4486 aa-1.9□□□□□ -2.71
PDCD5-206ENST00000588622 SCN7AQ01118 1682 aa-1.9□□□□□ -2.71
PDCD5-206ENST00000588622 LYSTQ99698 3801 aa-1.9□□□□□ -2.71
PDCD5-206ENST00000588622 AKAP13Q12802 2813 aa-1.91□□□□□ -2.72
PDCD5-206ENST00000588622 UBE2L5PA0A1B0GUS4 154 aa-1.91□□□□□ -2.72
PDCD5-206ENST00000588622 GNG11P61952 73 aa-1.91□□□□□ -2.72
PDCD5-206ENST00000588622 UBE2L3P68036 154 aaKnown RBP-1.91□□□□□ -2.72
PDCD5-206ENST00000588622 C9orf153Q5TBE3 101 aa-1.91□□□□□ -2.72
PDCD5-206ENST00000588622 SFTA2Q6UW10 78 aa-1.91□□□□□ -2.72
PDCD5-206ENST00000588622 CCDC141Q6ZP82 1450 aa-1.91□□□□□ -2.72
PDCD5-206ENST00000588622 NLRP1Q9C000 1473 aa-1.91□□□□□ -2.72
PDCD5-206ENST00000588622 QRICH2Q9H0J4 1663 aa-1.91□□□□□ -2.72
PDCD5-206ENST00000588622 PKHD1L1Q86WI1 4243 aa-1.92□□□□□ -2.72
PDCD5-206ENST00000588622 LAMA1P25391 3075 aa-1.92□□□□□ -2.72
PDCD5-206ENST00000588622 UBE2D3P61077 147 aa-1.92□□□□□ -2.72
PDCD5-206ENST00000588622 UBE2D2P62837 147 aa-1.92□□□□□ -2.72
PDCD5-206ENST00000588622 Q0VG73 95 aa-1.92□□□□□ -2.72
PDCD5-206ENST00000588622 MANBALQ9NQG1 85 aa-1.92□□□□□ -2.72
PDCD5-206ENST00000588622 LINC00846Q9NV44 126 aa-1.92□□□□□ -2.72
PDCD5-206ENST00000588622 TEP1Q99973 2627 aaKnown RBP-1.92□□□□□ -2.72
PDCD5-206ENST00000588622 KTN1Q86UP2 1357 aaKnown RBP-1.93□□□□□ -2.72
PDCD5-206ENST00000588622 MARF1Q9Y4F3 1742 aaKnown RBP-1.93□□□□□ -2.72
PDCD5-206ENST00000588622 F6UZH7 168 aa-1.93□□□□□ -2.72
PDCD5-206ENST00000588622 I3L3M4 83 aa-1.93□□□□□ -2.72
PDCD5-206ENST00000588622 NDUFA2O43678 99 aa-1.93□□□□□ -2.72
PDCD5-206ENST00000588622 DPH3P1Q9H4G8 78 aa-1.93□□□□□ -2.72
PDCD5-206ENST00000588622 A0A1B0GU69 56 aa-1.94□□□□□ -2.72
PDCD5-206ENST00000588622 COX6CP09669 75 aa-1.94□□□□□ -2.72
PDCD5-206ENST00000588622 TRAPPC2P0DI81 140 aa-1.94□□□□□ -2.72
PDCD5-206ENST00000588622 TRAPPC2BP0DI82 140 aa-1.94□□□□□ -2.72
PDCD5-206ENST00000588622 DIP2CQ9Y2E4 1556 aa-1.94□□□□□ -2.72
PDCD5-206ENST00000588622 AKAIN1P0CW23 69 aa-1.95□□□□□ -2.72
PDCD5-206ENST00000588622 A2ML1A8K2U0 1454 aa-1.95□□□□□ -2.72
PDCD5-206ENST00000588622 NUP188Q5SRE5 1749 aa-1.96□□□□□ -2.72
PDCD5-206ENST00000588622 ADAMTS12P58397 1594 aa-1.96□□□□□ -2.72
PDCD5-206ENST00000588622 SAA2P0DJI9 122 aaPredicted RBP-1.96□□□□□ -2.72
PDCD5-206ENST00000588622 CCDC58Q4VC31 144 aa-1.96□□□□□ -2.72
PDCD5-206ENST00000588622 PRO1854Q9UHT4 67 aa-1.96□□□□□ -2.72
PDCD5-206ENST00000588622 PTPN23Q9H3S7 1636 aa-1.96□□□□□ -2.72
PDCD5-206ENST00000588622 MRC2Q9UBG0 1479 aa-1.96□□□□□ -2.72
PDCD5-206ENST00000588622 ATP5EP56381 51 aaPredicted RBP-1.97□□□□□ -2.72
PDCD5-206ENST00000588622 SCAPERQ9BY12 1400 aa-1.98□□□□□ -2.73
PDCD5-206ENST00000588622 TNRC18O15417 2968 aaPredicted RBP-1.98□□□□□ -2.73
PDCD5-206ENST00000588622 MT1AP04731 61 aa-1.98□□□□□ -2.73
PDCD5-206ENST00000588622 PP6455Q8WZ26 134 aa-1.98□□□□□ -2.73
PDCD5-206ENST00000588622 C12orf57Q99622 126 aa-1.98□□□□□ -2.73
PDCD5-206ENST00000588622 CUBNO60494 3623 aa-1.98□□□□□ -2.73
PDCD5-206ENST00000588622 TRANK1O15050 2925 aa-1.99□□□□□ -2.73
PDCD5-206ENST00000588622 SLIT1O75093 1534 aa-1.99□□□□□ -2.73
PDCD5-206ENST00000588622 C6orf201Q7Z4U5 140 aa-1.99□□□□□ -2.73
PDCD5-206ENST00000588622 FAM24AA6NFZ4 105 aa-2□□□□□ -2.73
PDCD5-206ENST00000588622 K7EP13 123 aa-2□□□□□ -2.73
PDCD5-206ENST00000588622 EDC4Q6P2E9 1401 aaKnown RBP-2□□□□□ -2.73
PDCD5-206ENST00000588622 A0A087WVE0 104 aa-2.01□□□□□ -2.73
PDCD5-206ENST00000588622 H0YGG7 62 aa-2.01□□□□□ -2.73
PDCD5-206ENST00000588622 LELP1Q5T871 98 aa-2.01□□□□□ -2.73
PDCD5-206ENST00000588622 MRPL34Q9BQ48 92 aaKnown RBP-2.01□□□□□ -2.73
PDCD5-206ENST00000588622 LAMA2P24043 3122 aaKnown RBP-2.01□□□□□ -2.73
PDCD5-206ENST00000588622 PDE4DIPQ5VU43 2346 aa-2.01□□□□□ -2.73
PDCD5-206ENST00000588622 NAP1L6A6NFF2 107 aa-2.02□□□□□ -2.73
PDCD5-206ENST00000588622 TOP2BQ02880 1626 aa-2.02□□□□□ -2.73
PDCD5-206ENST00000588622 COL4A6Q14031 1691 aa-2.02□□□□□ -2.73
PDCD5-206ENST00000588622 PDCD11Q14690 1871 aaKnown RBP-2.03□□□□□ -2.73
PDCD5-206ENST00000588622 SNCAP37840 140 aa-2.03□□□□□ -2.73
PDCD5-206ENST00000588622 DMXL1Q9Y485 3027 aa-2.04□□□□□ -2.74
PDCD5-206ENST00000588622 HEPN1Q6WQI6 88 aa-2.04□□□□□ -2.74
PDCD5-206ENST00000588622 ZZEF1O43149 2961 aa-2.04□□□□□ -2.74
PDCD5-206ENST00000588622 TROQ12816 1431 aaPredicted RBP-2.05□□□□□ -2.74
PDCD5-206ENST00000588622 CCL22O00626 93 aa-2.05□□□□□ -2.74
PDCD5-206ENST00000588622 ACACAQ13085 2346 aa-2.05□□□□□ -2.74
PDCD5-206ENST00000588622 NCOA3Q9Y6Q9 1424 aa-2.06□□□□□ -2.74
PDCD5-206ENST00000588622 C1orf54Q8WWF1 131 aa-2.06□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms