RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 ODF1Q14990 250 aa6.51□□□□□ -1.37
TPM4-209ENST00000588483 C2orf82Q6UX34 121 aa6.51□□□□□ -1.37
TPM4-209ENST00000588483 CST9LQ9H4G1 147 aa6.51□□□□□ -1.37
TPM4-209ENST00000588483 GEMIN7Q9H840 131 aaKnown RBP6.51□□□□□ -1.37
TPM4-209ENST00000588483 HMCN2Q8NDA2 5059 aa6.5□□□□□ -1.37
TPM4-209ENST00000588483 SMIM1B2RUZ4 78 aa6.5□□□□□ -1.37
TPM4-209ENST00000588483 LINC00614P0C842 121 aa6.5□□□□□ -1.37
TPM4-209ENST00000588483 CXCL5P42830 114 aa6.5□□□□□ -1.37
TPM4-209ENST00000588483 PMVKQ15126 192 aa6.5□□□□□ -1.37
TPM4-209ENST00000588483 PACRGQ96M98 296 aaPredicted RBP6.5□□□□□ -1.37
TPM4-209ENST00000588483 PRSS2P07478 247 aa6.49□□□□□ -1.37
TPM4-209ENST00000588483 MT1HL1P0DM35 61 aa6.49□□□□□ -1.37
TPM4-209ENST00000588483 SRSF9Q13242 221 aaKnown RBP eCLIP6.49□□□□□ -1.37
TPM4-209ENST00000588483 PDZD11Q5EBL8 140 aa6.49□□□□□ -1.37
TPM4-209ENST00000588483 C6orf226Q5I0X4 101 aa6.49□□□□□ -1.37
TPM4-209ENST00000588483 SPINK6Q6UWN8 80 aa6.49□□□□□ -1.37
TPM4-209ENST00000588483 LINC00469Q8N7U9 141 aa6.49□□□□□ -1.37
TPM4-209ENST00000588483 F8VRH5 84 aa6.48□□□□□ -1.37
TPM4-209ENST00000588483 HBDP02042 147 aa6.48□□□□□ -1.37
TPM4-209ENST00000588483 IGLC3P0DOY3 106 aa6.48□□□□□ -1.37
TPM4-209ENST00000588483 RAB5BP61020 215 aa6.48□□□□□ -1.37
TPM4-209ENST00000588483 CKS1BP61024 79 aa6.48□□□□□ -1.37
TPM4-209ENST00000588483 KRTAP7-1Q8IUC3 87 aa6.48□□□□□ -1.37
TPM4-209ENST00000588483 FAM168BA1KXE4 195 aa6.47□□□□□ -1.37
TPM4-209ENST00000588483 C9orf129Q5T035 196 aaKnown RBP6.47□□□□□ -1.37
TPM4-209ENST00000588483 PHF5AQ7RTV0 110 aaKnown RBP6.47□□□□□ -1.37
TPM4-209ENST00000588483 TOMM7Q9P0U1 55 aa6.47□□□□□ -1.37
TPM4-209ENST00000588483 PSORS1C2Q9UIG4 136 aa6.47□□□□□ -1.37
TPM4-209ENST00000588483 GAGE2EQ4V326 116 aa6.46□□□□□ -1.38
TPM4-209ENST00000588483 SERTAD4-AS1Q5TG53 156 aa6.46□□□□□ -1.38
TPM4-209ENST00000588483 LINC01600Q96MT4 127 aa6.46□□□□□ -1.38
TPM4-209ENST00000588483 GAGE2DQ9UEU5 116 aa6.46□□□□□ -1.38
TPM4-209ENST00000588483 IGLV5-39A0A0G2JS06 123 aa6.45□□□□□ -1.38
TPM4-209ENST00000588483 H3BRM9 83 aa6.45□□□□□ -1.38
TPM4-209ENST00000588483 ATP5LO75964 103 aa6.45□□□□□ -1.38
TPM4-209ENST00000588483 COX7B2Q8TF08 81 aa6.45□□□□□ -1.38
TPM4-209ENST00000588483 CHCHD1Q96BP2 118 aaKnown RBP6.45□□□□□ -1.38
TPM4-209ENST00000588483 FAM19A5Q7Z5A7 132 aaPredicted RBP6.44□□□□□ -1.38
TPM4-209ENST00000588483 CBLN2Q8IUK8 224 aa6.44□□□□□ -1.38
TPM4-209ENST00000588483 M0QXV9 152 aa6.43□□□□□ -1.38
TPM4-209ENST00000588483 SPINK8P0C7L1 97 aa6.43□□□□□ -1.38
TPM4-209ENST00000588483 ZNF22P17026 224 aaPredicted RBP6.43□□□□□ -1.38
TPM4-209ENST00000588483 PMCHL1Q16048 86 aa6.43□□□□□ -1.38
TPM4-209ENST00000588483 REG3GQ6UW15 175 aa6.43□□□□□ -1.38
TPM4-209ENST00000588483 KRTAP11-1Q8IUC1 163 aa6.43□□□□□ -1.38
TPM4-209ENST00000588483 C1orf137Q5JT78 98 aa6.42□□□□□ -1.38
TPM4-209ENST00000588483 TP73-AS1Q9UF72 201 aa6.42□□□□□ -1.38
TPM4-209ENST00000588483 TRAV12-1A0A0B4J245 112 aa6.41□□□□□ -1.38
TPM4-209ENST00000588483 IGLV7-43P04211 117 aa6.41□□□□□ -1.38
TPM4-209ENST00000588483 PLA2G2DQ9UNK4 145 aa6.41□□□□□ -1.38
TPM4-209ENST00000588483 C11orf86A6NJI1 115 aa6.4□□□□□ -1.38
TPM4-209ENST00000588483 NDUFA6P56556 154 aa6.4□□□□□ -1.38
TPM4-209ENST00000588483 KRTAP10-8P60410 259 aa6.4□□□□□ -1.38
TPM4-209ENST00000588483 SFTA2Q6UW10 78 aa6.4□□□□□ -1.38
TPM4-209ENST00000588483 BAGE3Q86Y29 109 aa6.4□□□□□ -1.38
TPM4-209ENST00000588483 SLC7A5P1Q8MH63 180 aa6.4□□□□□ -1.38
TPM4-209ENST00000588483 XAGE1AQ9HD64 81 aa6.4□□□□□ -1.38
TPM4-209ENST00000588483 IGLV5-37A0A075B6J1 123 aa6.39□□□□□ -1.39
TPM4-209ENST00000588483 TRGC2P03986 189 aa6.39□□□□□ -1.39
TPM4-209ENST00000588483 IFI27L1Q96BM0 104 aa6.39□□□□□ -1.39
TPM4-209ENST00000588483 C22orf24Q9Y442 160 aa6.39□□□□□ -1.39
TPM4-209ENST00000588483 COLCA2A8K830 154 aa6.38□□□□□ -1.39
TPM4-209ENST00000588483 NUPR1O60356 82 aa6.38□□□□□ -1.39
TPM4-209ENST00000588483 LINC00310P59036 64 aa6.38□□□□□ -1.39
TPM4-209ENST00000588483 UBE2BP63146 152 aa6.38□□□□□ -1.39
TPM4-209ENST00000588483 COX17Q14061 63 aa6.38□□□□□ -1.39
TPM4-209ENST00000588483 LBHQ53QV2 105 aaPredicted RBP6.38□□□□□ -1.39
TPM4-209ENST00000588483 DIRC1Q969H9 104 aa6.38□□□□□ -1.39
TPM4-209ENST00000588483 CHTOPQ9Y3Y2 248 aaKnown RBP6.38□□□□□ -1.39
TPM4-209ENST00000588483 H0Y9J4 135 aa6.37□□□□□ -1.39
TPM4-209ENST00000588483 HSBP1O75506 76 aa6.37□□□□□ -1.39
TPM4-209ENST00000588483 TMEM170BQ5T4T1 132 aa6.37□□□□□ -1.39
TPM4-209ENST00000588483 MRPL55Q7Z7F7 128 aaKnown RBP6.37□□□□□ -1.39
TPM4-209ENST00000588483 ZNF625Q96I27 306 aaPredicted RBP6.37□□□□□ -1.39
TPM4-209ENST00000588483 TMEM223A0PJW6 202 aa6.36□□□□□ -1.39
TPM4-209ENST00000588483 ERG28Q9UKR5 140 aa6.36□□□□□ -1.39
TPM4-209ENST00000588483 FAM19A2Q8N3H0 131 aa6.35□□□□□ -1.39
TPM4-209ENST00000588483 ZNF861PO60384 105 aa6.34□□□□□ -1.39
TPM4-209ENST00000588483 SERF1AO75920 110 aa6.34□□□□□ -1.39
TPM4-209ENST00000588483 KRTAP1-4P0C5Y4 121 aa6.34□□□□□ -1.39
TPM4-209ENST00000588483 UBR4Q5T4S7 5183 aa6.33□□□□□ -1.4
TPM4-209ENST00000588483 LEPROTL1O95214 131 aa6.33□□□□□ -1.4
TPM4-209ENST00000588483 PFN2P35080 140 aa6.33□□□□□ -1.4
TPM4-209ENST00000588483 LINC00167Q96N53 147 aa6.33□□□□□ -1.4
TPM4-209ENST00000588483 SND1-IT1Q9HBX3 110 aa6.33□□□□□ -1.4
TPM4-209ENST00000588483 BCE1O60756 84 aa6.32□□□□□ -1.4
TPM4-209ENST00000588483 VPREB1P12018 145 aa6.32□□□□□ -1.4
TPM4-209ENST00000588483 LRP2P98164 4655 aa6.31□□□□□ -1.4
TPM4-209ENST00000588483 IGLV1-50A0A075B6I6 118 aa6.31□□□□□ -1.4
TPM4-209ENST00000588483 NKAPP1Q8N9T2 125 aa6.31□□□□□ -1.4
TPM4-209ENST00000588483 HSPB8Q9UJY1 196 aa6.31□□□□□ -1.4
TPM4-209ENST00000588483 PLNP26678 52 aa6.3□□□□□ -1.4
TPM4-209ENST00000588483 HERV-K104P63124 156 aa6.3□□□□□ -1.4
TPM4-209ENST00000588483 RPL24P83731 157 aaKnown RBP6.3□□□□□ -1.4
TPM4-209ENST00000588483 KRTAP13-1Q8IUC0 172 aa6.3□□□□□ -1.4
TPM4-209ENST00000588483 RPL37AP8A6NKH3 93 aa6.29□□□□□ -1.4
TPM4-209ENST00000588483 RPL28P46779 137 aaKnown RBP6.29□□□□□ -1.4
TPM4-209ENST00000588483 LINC00587B1AMM8 73 aa6.28□□□□□ -1.4
TPM4-209ENST00000588483 HIST1H2BKO60814 126 aa6.28□□□□□ -1.4
TPM4-209ENST00000588483 HIST1H2BJP06899 126 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms