RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 F8W036 122 aa7.97□□□□□ -1.13
CLPTM1-208ENST00000588274 C2orf66Q6UXQ4 117 aa7.97□□□□□ -1.13
CLPTM1-208ENST00000588274 Q6ZN92 141 aa7.97□□□□□ -1.13
CLPTM1-208ENST00000588274 PRELID3AQ96N28 172 aa7.97□□□□□ -1.13
CLPTM1-208ENST00000588274 F8VRH5 84 aa7.96□□□□□ -1.14
CLPTM1-208ENST00000588274 S100A8P05109 93 aa7.96□□□□□ -1.14
CLPTM1-208ENST00000588274 RAB5AP20339 215 aa7.96□□□□□ -1.14
CLPTM1-208ENST00000588274 CKS1BP61024 79 aa7.96□□□□□ -1.14
CLPTM1-208ENST00000588274 TMEM136Q6ZRR5 245 aa7.96□□□□□ -1.14
CLPTM1-208ENST00000588274 LINC00167Q96N53 147 aa7.96□□□□□ -1.14
CLPTM1-208ENST00000588274 TOMM7Q9P0U1 55 aa7.96□□□□□ -1.14
CLPTM1-208ENST00000588274 CDKN2A-AS1Q9UH64 79 aa7.96□□□□□ -1.14
CLPTM1-208ENST00000588274 RPL37AP8A6NKH3 93 aa7.95□□□□□ -1.14
CLPTM1-208ENST00000588274 C2orf88Q9BSF0 95 aa7.95□□□□□ -1.14
CLPTM1-208ENST00000588274 IGLV5-37A0A075B6J1 123 aa7.94□□□□□ -1.14
CLPTM1-208ENST00000588274 PRSS2P07478 247 aa7.94□□□□□ -1.14
CLPTM1-208ENST00000588274 NPSP0C0P6 89 aa7.94□□□□□ -1.14
CLPTM1-208ENST00000588274 CTAG1AP78358 180 aa7.94□□□□□ -1.14
CLPTM1-208ENST00000588274 FAM229BQ4G0N7 80 aa7.94□□□□□ -1.14
CLPTM1-208ENST00000588274 C6orf226Q5I0X4 101 aa7.94□□□□□ -1.14
CLPTM1-208ENST00000588274 ATP5L2Q7Z4Y8 100 aa7.94□□□□□ -1.14
CLPTM1-208ENST00000588274 LINC00304Q8N9R0 145 aa7.94□□□□□ -1.14
CLPTM1-208ENST00000588274 ALKBH7Q9BT30 221 aaPredicted RBP7.94□□□□□ -1.14
CLPTM1-208ENST00000588274 CYSLTR1Q9Y271 337 aa7.94□□□□□ -1.14
CLPTM1-208ENST00000588274 SLC7A5P1Q8MH63 180 aa7.93□□□□□ -1.14
CLPTM1-208ENST00000588274 LAMTOR2Q9Y2Q5 125 aa7.93□□□□□ -1.14
CLPTM1-208ENST00000588274 LOC389332A0A1B0GUA5 103 aa7.92□□□□□ -1.14
CLPTM1-208ENST00000588274 SMIM1B2RUZ4 78 aa7.92□□□□□ -1.14
CLPTM1-208ENST00000588274 Q8N8P6 123 aa7.92□□□□□ -1.14
CLPTM1-208ENST00000588274 IGLV7-46A0A075B6I9 117 aa7.91□□□□□ -1.14
CLPTM1-208ENST00000588274 GAGE10A6NGK3 116 aa7.91□□□□□ -1.14
CLPTM1-208ENST00000588274 IFITM2Q01629 132 aa7.91□□□□□ -1.14
CLPTM1-208ENST00000588274 CDIP1Q9H305 208 aa7.91□□□□□ -1.14
CLPTM1-208ENST00000588274 VCX2Q9H322 139 aa7.91□□□□□ -1.14
CLPTM1-208ENST00000588274 CXCL5P42830 114 aa7.9□□□□□ -1.14
CLPTM1-208ENST00000588274 HERVK_113P63121 156 aa7.9□□□□□ -1.14
CLPTM1-208ENST00000588274 PNRC1Q12796 327 aaPredicted RBP7.9□□□□□ -1.14
CLPTM1-208ENST00000588274 MAP1LC3AQ9H492 121 aa7.9□□□□□ -1.14
CLPTM1-208ENST00000588274 IGLV5-45A0A087WSX0 123 aa7.89□□□□□ -1.15
CLPTM1-208ENST00000588274 SCO1O75880 301 aa7.89□□□□□ -1.15
CLPTM1-208ENST00000588274 ORMDL2Q53FV1 153 aa7.88□□□□□ -1.15
CLPTM1-208ENST00000588274 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
CLPTM1-208ENST00000588274 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
CLPTM1-208ENST00000588274 KRTAP4-1Q9BYQ7 146 aa7.88□□□□□ -1.15
CLPTM1-208ENST00000588274 K7EMI3 77 aa7.87□□□□□ -1.15
CLPTM1-208ENST00000588274 PRLHP81277 87 aa7.87□□□□□ -1.15
CLPTM1-208ENST00000588274 IGKV2-28A0A075B6P5 120 aa7.86□□□□□ -1.15
CLPTM1-208ENST00000588274 IGKV2D-28P01615 120 aa7.86□□□□□ -1.15
CLPTM1-208ENST00000588274 UBE2AP49459 152 aa7.86□□□□□ -1.15
CLPTM1-208ENST00000588274 SEC11AP67812 179 aa7.86□□□□□ -1.15
CLPTM1-208ENST00000588274 C3orf22Q8N5N4 141 aa7.86□□□□□ -1.15
CLPTM1-208ENST00000588274 TOMM6Q96B49 74 aa7.86□□□□□ -1.15
CLPTM1-208ENST00000588274 PEA15Q15121 130 aa7.85□□□□□ -1.15
CLPTM1-208ENST00000588274 PDZD11Q5EBL8 140 aa7.85□□□□□ -1.15
CLPTM1-208ENST00000588274 Q8NDZ9 215 aa7.85□□□□□ -1.15
CLPTM1-208ENST00000588274 COX7B2Q8TF08 81 aa7.85□□□□□ -1.15
CLPTM1-208ENST00000588274 PPDPFQ9H3Y8 114 aa7.85□□□□□ -1.15
CLPTM1-208ENST00000588274 GEMIN7Q9H840 131 aaKnown RBP7.85□□□□□ -1.15
CLPTM1-208ENST00000588274 IGKV2D-26A0A0A0MRZ7 120 aa7.83□□□□□ -1.16
CLPTM1-208ENST00000588274 TINCRA0A1B0GVN0 87 aa7.83□□□□□ -1.16
CLPTM1-208ENST00000588274 TMEM238C9JI98 176 aa7.83□□□□□ -1.16
CLPTM1-208ENST00000588274 M0R378 163 aa7.83□□□□□ -1.16
CLPTM1-208ENST00000588274 VPREB1P12018 145 aa7.83□□□□□ -1.16
CLPTM1-208ENST00000588274 ADCYAP1P18509 176 aa7.83□□□□□ -1.16
CLPTM1-208ENST00000588274 KRTAP13-3Q3SY46 172 aa7.83□□□□□ -1.16
CLPTM1-208ENST00000588274 PLEKHB2Q96CS7 222 aa7.83□□□□□ -1.16
CLPTM1-208ENST00000588274 TMEM126AQ9H061 195 aa7.83□□□□□ -1.16
CLPTM1-208ENST00000588274 NXT2Q9NPJ8 142 aaKnown RBP7.83□□□□□ -1.16
CLPTM1-208ENST00000588274 ASB16-AS1Q495Z4 193 aa7.82□□□□□ -1.16
CLPTM1-208ENST00000588274 PAPPA-AS1Q5QFB9 102 aa7.82□□□□□ -1.16
CLPTM1-208ENST00000588274 NKAPP1Q8N9T2 125 aa7.82□□□□□ -1.16
CLPTM1-208ENST00000588274 SVIPQ8NHG7 77 aa7.82□□□□□ -1.16
CLPTM1-208ENST00000588274 SPINK8P0C7L1 97 aa7.81□□□□□ -1.16
CLPTM1-208ENST00000588274 RAB5BP61020 215 aa7.81□□□□□ -1.16
CLPTM1-208ENST00000588274 ERASQ7Z444 233 aa7.81□□□□□ -1.16
CLPTM1-208ENST00000588274 RAB14P61106 215 aa7.79□□□□□ -1.16
CLPTM1-208ENST00000588274 FP248Q71RG6 208 aaPredicted RBP7.79□□□□□ -1.16
CLPTM1-208ENST00000588274 FAM19A1Q7Z5A9 133 aa7.79□□□□□ -1.16
CLPTM1-208ENST00000588274 CRCT1Q9UGL9 99 aa7.79□□□□□ -1.16
CLPTM1-208ENST00000588274 IGLV5-39A0A0G2JS06 123 aa7.78□□□□□ -1.16
CLPTM1-208ENST00000588274 LINC01546A6NGU7 62 aa7.78□□□□□ -1.16
CLPTM1-208ENST00000588274 CST9LQ9H4G1 147 aa7.78□□□□□ -1.16
CLPTM1-208ENST00000588274 S100A6P06703 90 aa7.77□□□□□ -1.17
CLPTM1-208ENST00000588274 CLLU1Q5K131 121 aa7.77□□□□□ -1.17
CLPTM1-208ENST00000588274 LCE2CQ5TA81 110 aa7.77□□□□□ -1.17
CLPTM1-208ENST00000588274 SCGB3A1Q96QR1 104 aa7.77□□□□□ -1.17
CLPTM1-208ENST00000588274 SND1-IT1Q9HBX3 110 aa7.77□□□□□ -1.17
CLPTM1-208ENST00000588274 SPRR4Q96PI1 79 aa7.76□□□□□ -1.17
CLPTM1-208ENST00000588274 ATP5LO75964 103 aa7.75□□□□□ -1.17
CLPTM1-208ENST00000588274 PFN2P35080 140 aa7.75□□□□□ -1.17
CLPTM1-208ENST00000588274 KIAA1644Q3SXP7 199 aa7.75□□□□□ -1.17
CLPTM1-208ENST00000588274 SPAG11AQ6PDA7 123 aa7.75□□□□□ -1.17
CLPTM1-208ENST00000588274 ANAPC16Q96DE5 110 aa7.75□□□□□ -1.17
CLPTM1-208ENST00000588274 TMA7Q9Y2S6 64 aaKnown RBP7.75□□□□□ -1.17
CLPTM1-208ENST00000588274 LOC105371267A0A1B0GV96 52 aa7.74□□□□□ -1.17
CLPTM1-208ENST00000588274 G0S2P27469 103 aa7.74□□□□□ -1.17
CLPTM1-208ENST00000588274 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
CLPTM1-208ENST00000588274 CBLN2Q8IUK8 224 aa7.74□□□□□ -1.17
CLPTM1-208ENST00000588274 ERG28Q9UKR5 140 aa7.74□□□□□ -1.17
CLPTM1-208ENST00000588274 MT-ND4LP03901 98 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms