RNA–Protein interactions for RNA: ENST00000587113.1

GJC1-205, Transcript of gap junction protein gamma 1, human

TSL 5

Gene GJC1, Length 3,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GJC1-205	ENST00000587113	ATR	Q13535	2644 aa		4.56	□□□□□ -1.68
GJC1-205	ENST00000587113		A0A0J9YXY3	114 aa		4.56	□□□□□ -1.68
GJC1-205	ENST00000587113	COX7A1	P24310	79 aa		4.56	□□□□□ -1.68
GJC1-205	ENST00000587113	FAM229B	Q4G0N7	80 aa		4.56	□□□□□ -1.68
GJC1-205	ENST00000587113	TENM1	Q9UKZ4	2725 aa		4.56	□□□□□ -1.68
GJC1-205	ENST00000587113	DNAL4	O96015	105 aa		4.55	□□□□□ -1.68
GJC1-205	ENST00000587113	PLGLA	Q15195	96 aa		4.55	□□□□□ -1.68
GJC1-205	ENST00000587113	LY6E	Q16553	131 aa		4.55	□□□□□ -1.68
GJC1-205	ENST00000587113	RMI2	Q96E14	147 aa		4.55	□□□□□ -1.68
GJC1-205	ENST00000587113	B9D2	Q9BPU9	175 aa		4.55	□□□□□ -1.68
GJC1-205	ENST00000587113	RPL37AP8	A6NKH3	93 aa		4.55	□□□□□ -1.68
GJC1-205	ENST00000587113	PRAC2	D3DTV9	90 aa		4.55	□□□□□ -1.68
GJC1-205	ENST00000587113		F8WEM9	126 aa		4.55	□□□□□ -1.68
GJC1-205	ENST00000587113	TRBV12-3	P01733	135 aa		4.55	□□□□□ -1.68
GJC1-205	ENST00000587113	RPL39	P62891	51 aa	Known RBP	4.55	□□□□□ -1.68
GJC1-205	ENST00000587113	IGHV1-58	A0A0C4DH39	117 aa		4.54	□□□□□ -1.68
GJC1-205	ENST00000587113	LEPROT	O15243	131 aa		4.54	□□□□□ -1.68
GJC1-205	ENST00000587113	DAD1	P61803	113 aa		4.54	□□□□□ -1.68
GJC1-205	ENST00000587113	KRTAP3-1	Q9BYR8	98 aa		4.54	□□□□□ -1.68
GJC1-205	ENST00000587113	C14orf132	Q9NPU4	83 aa		4.54	□□□□□ -1.68
GJC1-205	ENST00000587113		K7EIL1	84 aa		4.54	□□□□□ -1.68
GJC1-205	ENST00000587113	SPANXN1	Q5VSR9	72 aa		4.54	□□□□□ -1.68
GJC1-205	ENST00000587113	LITAF	Q99732	161 aa		4.54	□□□□□ -1.68
GJC1-205	ENST00000587113	IGLV5-37	A0A075B6J1	123 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113		M0R378	163 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	C9orf129	Q5T035	196 aa	Known RBP	4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	TMEM61	Q8N0U2	210 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	STAB1	Q9NY15	2570 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	IGKV3D-20	A0A0C4DH25	116 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	FAM19A3	Q7Z5A8	133 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	OPRPN	Q99935	248 aa	Predicted RBP	4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	RNF5	Q99942	180 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	IGIP	A6NJ69	53 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	BLCAP	P62952	87 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	FAM222A	Q5U5X8	452 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	C4orf3	Q8WVX3	66 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	JMJD1C	Q15652	2540 aa		4.53	□□□□□ -1.68
GJC1-205	ENST00000587113	LYRM9	A8MSI8	78 aa		4.52	□□□□□ -1.69
GJC1-205	ENST00000587113	MGP	P08493	103 aa		4.52	□□□□□ -1.69
GJC1-205	ENST00000587113	MRPS36	P82909	103 aa	Known RBP	4.52	□□□□□ -1.69
GJC1-205	ENST00000587113	PRB3	Q04118	309 aa	Predicted RBP	4.52	□□□□□ -1.69
GJC1-205	ENST00000587113	LYPD1	Q8N2G4	141 aa		4.52	□□□□□ -1.69
GJC1-205	ENST00000587113	COX7A2L	O14548	114 aa		4.52	□□□□□ -1.69
GJC1-205	ENST00000587113	KRTAP10-11	P60412	298 aa		4.52	□□□□□ -1.69
GJC1-205	ENST00000587113		Q8N9W7	124 aa		4.52	□□□□□ -1.69
GJC1-205	ENST00000587113	NPB	Q8NG41	125 aa		4.52	□□□□□ -1.69
GJC1-205	ENST00000587113	TIMM17A	Q99595	171 aa		4.52	□□□□□ -1.69
GJC1-205	ENST00000587113	DNAH9	Q9NYC9	4486 aa		4.52	□□□□□ -1.69
GJC1-205	ENST00000587113	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.52	□□□□□ -1.69
GJC1-205	ENST00000587113	IGHV1-3	A0A0C4DH29	117 aa		4.51	□□□□□ -1.69
GJC1-205	ENST00000587113	SDHAF1	A6NFY7	115 aa		4.51	□□□□□ -1.69
GJC1-205	ENST00000587113		H3BRN7	92 aa		4.51	□□□□□ -1.69
GJC1-205	ENST00000587113	ZNF876P	Q49A33	203 aa		4.51	□□□□□ -1.69
GJC1-205	ENST00000587113	COPS9	Q8WXC6	57 aa		4.51	□□□□□ -1.69
GJC1-205	ENST00000587113	IGHV7-4-1	A0A0J9YVY3	117 aa		4.51	□□□□□ -1.69
GJC1-205	ENST00000587113	ZNF833P	Q6ZTB9	187 aa		4.51	□□□□□ -1.69
GJC1-205	ENST00000587113		M0R381	172 aa		4.51	□□□□□ -1.69
GJC1-205	ENST00000587113	C9orf66	Q5T8R8	295 aa		4.51	□□□□□ -1.69
GJC1-205	ENST00000587113	ENHO	Q6UWT2	76 aa		4.51	□□□□□ -1.69
GJC1-205	ENST00000587113	ZNF73	O43830	326 aa	Predicted RBP	4.5	□□□□□ -1.69
GJC1-205	ENST00000587113	MIA	Q16674	131 aa		4.5	□□□□□ -1.69
GJC1-205	ENST00000587113	MRGPRG-AS1	Q2M3A8	158 aa		4.5	□□□□□ -1.69
GJC1-205	ENST00000587113		A0A0J9YXV3	536 aa		4.5	□□□□□ -1.69
GJC1-205	ENST00000587113		H3BUA1	57 aa		4.5	□□□□□ -1.69
GJC1-205	ENST00000587113	TMEM256-PLSCR3	K7ERE1	68 aa		4.5	□□□□□ -1.69
GJC1-205	ENST00000587113	IGKV1-17	P01599	117 aa		4.5	□□□□□ -1.69
GJC1-205	ENST00000587113	IGHV3-30-3	P0DP02	117 aa		4.5	□□□□□ -1.69
GJC1-205	ENST00000587113	TMEM167A	Q8TBQ9	72 aa		4.5	□□□□□ -1.69
GJC1-205	ENST00000587113		S4R3C0	116 aa		4.5	□□□□□ -1.69
GJC1-205	ENST00000587113	TRBV27	A0A0K0K1C4	114 aa		4.5	□□□□□ -1.69
GJC1-205	ENST00000587113	ZNF625	Q96I27	306 aa	Predicted RBP	4.5	□□□□□ -1.69
GJC1-205	ENST00000587113	VSIG2	Q96IQ7	327 aa		4.5	□□□□□ -1.69
GJC1-205	ENST00000587113	WNK2	Q9Y3S1	2297 aa		4.49	□□□□□ -1.69
GJC1-205	ENST00000587113		A0A0J9YX75	114 aa		4.49	□□□□□ -1.69
GJC1-205	ENST00000587113		A8MUN3	132 aa		4.49	□□□□□ -1.69
GJC1-205	ENST00000587113	IGHV4OR15-8	A0A075B7B6	117 aa		4.49	□□□□□ -1.69
GJC1-205	ENST00000587113	IGHV3-38	A0A0C4DH36	116 aa		4.49	□□□□□ -1.69
GJC1-205	ENST00000587113	KLKP1	Q107X0	134 aa		4.49	□□□□□ -1.69
GJC1-205	ENST00000587113	NBEAL1	Q6ZS30	2694 aa		4.48	□□□□□ -1.69
GJC1-205	ENST00000587113	C3orf84	H3BNL1	204 aa		4.48	□□□□□ -1.69
GJC1-205	ENST00000587113	C9orf47	Q6ZRZ4	202 aa		4.48	□□□□□ -1.69
GJC1-205	ENST00000587113	NDUFA12	Q9UI09	145 aa		4.48	□□□□□ -1.69
GJC1-205	ENST00000587113	TMEM141	Q96I45	108 aa		4.48	□□□□□ -1.69
GJC1-205	ENST00000587113	DNAH7	Q8WXX0	4024 aa		4.48	□□□□□ -1.69
GJC1-205	ENST00000587113	TRAV7	A0A075B6U4	112 aa		4.48	□□□□□ -1.69
GJC1-205	ENST00000587113	LINC00588	Q9Y4M8	146 aa		4.48	□□□□□ -1.69
GJC1-205	ENST00000587113	IGHV3-72	A0A0B4J1Y9	119 aa		4.47	□□□□□ -1.69
GJC1-205	ENST00000587113	NCR3	O14931	201 aa		4.47	□□□□□ -1.69
GJC1-205	ENST00000587113	RPL27A	P46776	148 aa	Known RBP	4.47	□□□□□ -1.69
GJC1-205	ENST00000587113	PDE6H	Q13956	83 aa		4.47	□□□□□ -1.69
GJC1-205	ENST00000587113	IGLV2-23	P01705	113 aa		4.47	□□□□□ -1.69
GJC1-205	ENST00000587113	C10orf99	Q6UWK7	81 aa		4.47	□□□□□ -1.69
GJC1-205	ENST00000587113	GPHB5	Q86YW7	130 aa		4.47	□□□□□ -1.69
GJC1-205	ENST00000587113	IGHV3OR16-8	A0A075B7F1	116 aa		4.46	□□□□□ -1.69
GJC1-205	ENST00000587113	TRAV13-2	A0A0B4J235	113 aa		4.46	□□□□□ -1.69
GJC1-205	ENST00000587113	TRAV10	A0A0B4J240	114 aa		4.46	□□□□□ -1.7
GJC1-205	ENST00000587113	LRCOL1	A6NCL2	159 aa		4.46	□□□□□ -1.7
GJC1-205	ENST00000587113	NDUFS5	O43920	106 aa		4.46	□□□□□ -1.7
GJC1-205	ENST00000587113	RNASE4	P34096	147 aa	Known RBP	4.46	□□□□□ -1.7
GJC1-205	ENST00000587113	VWF	P04275	2813 aa		4.46	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms