RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 C2orf48Q96LS8 159 aa8.62□□□□□ -1.03
ATG4D-206ENST00000586863 PACRGQ96M98 296 aaPredicted RBP8.62□□□□□ -1.03
ATG4D-206ENST00000586863 RPL18AQ02543 176 aaKnown RBP8.61□□□□□ -1.03
ATG4D-206ENST00000586863 SPAG11BQ08648 103 aa8.61□□□□□ -1.03
ATG4D-206ENST00000586863 C9orf116Q5BN46 136 aaPredicted RBP8.61□□□□□ -1.03
ATG4D-206ENST00000586863 C2orf66Q6UXQ4 117 aa8.61□□□□□ -1.03
ATG4D-206ENST00000586863 MRPS36P82909 103 aaKnown RBP8.6□□□□□ -1.03
ATG4D-206ENST00000586863 Q6ZN92 141 aa8.6□□□□□ -1.03
ATG4D-206ENST00000586863 FAM104AQ969W3 186 aa8.6□□□□□ -1.03
ATG4D-206ENST00000586863 URB1-AS1Q96HZ7 61 aa8.6□□□□□ -1.03
ATG4D-206ENST00000586863 OPRPNQ99935 248 aaPredicted RBP8.6□□□□□ -1.03
ATG4D-206ENST00000586863 PSORS1C2Q9UIG4 136 aa8.6□□□□□ -1.03
ATG4D-206ENST00000586863 PYGO1Q9Y3Y4 419 aa8.6□□□□□ -1.03
ATG4D-206ENST00000586863 LINC01549A6NIU2 74 aa8.59□□□□□ -1.03
ATG4D-206ENST00000586863 PHF5AQ7RTV0 110 aaKnown RBP8.59□□□□□ -1.03
ATG4D-206ENST00000586863 TMEM141Q96I45 108 aa8.59□□□□□ -1.03
ATG4D-206ENST00000586863 JOSD1Q15040 202 aaPredicted RBP8.58□□□□□ -1.04
ATG4D-206ENST00000586863 PAPPA-AS1Q5QFB9 102 aa8.58□□□□□ -1.04
ATG4D-206ENST00000586863 BAGE3Q86Y29 109 aa8.58□□□□□ -1.04
ATG4D-206ENST00000586863 C2orf88Q9BSF0 95 aa8.58□□□□□ -1.04
ATG4D-206ENST00000586863 NPSP0C0P6 89 aa8.57□□□□□ -1.04
ATG4D-206ENST00000586863 TEX43Q6ZNM6 134 aa8.57□□□□□ -1.04
ATG4D-206ENST00000586863 ORAOV1Q8WV07 137 aa8.57□□□□□ -1.04
ATG4D-206ENST00000586863 VCX2Q9H322 139 aa8.57□□□□□ -1.04
ATG4D-206ENST00000586863 IGLV4-3A0A075B6K6 122 aa8.56□□□□□ -1.04
ATG4D-206ENST00000586863 IGHV3OR16-9A0A0B4J2B5 98 aa8.56□□□□□ -1.04
ATG4D-206ENST00000586863 LINC01546A6NGU7 62 aa8.56□□□□□ -1.04
ATG4D-206ENST00000586863 LINC00614P0C842 121 aa8.56□□□□□ -1.04
ATG4D-206ENST00000586863 RNF151Q2KHN1 245 aa8.56□□□□□ -1.04
ATG4D-206ENST00000586863 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
ATG4D-206ENST00000586863 TOMM6Q96B49 74 aa8.56□□□□□ -1.04
ATG4D-206ENST00000586863 SCGB3A1Q96QR1 104 aa8.56□□□□□ -1.04
ATG4D-206ENST00000586863 C10orf25Q5T742 122 aa8.55□□□□□ -1.04
ATG4D-206ENST00000586863 MRPL35Q9NZE8 188 aaKnown RBP8.55□□□□□ -1.04
ATG4D-206ENST00000586863 FAM168BA1KXE4 195 aa8.54□□□□□ -1.04
ATG4D-206ENST00000586863 ERASQ7Z444 233 aa8.54□□□□□ -1.04
ATG4D-206ENST00000586863 TIMM17AQ99595 171 aa8.54□□□□□ -1.04
ATG4D-206ENST00000586863 IGIPA6NJ69 53 aa8.53□□□□□ -1.04
ATG4D-206ENST00000586863 NDUFA1O15239 70 aa8.53□□□□□ -1.04
ATG4D-206ENST00000586863 KRTAP11-1Q8IUC1 163 aa8.53□□□□□ -1.04
ATG4D-206ENST00000586863 C6orf48Q9UBA6 75 aa8.53□□□□□ -1.04
ATG4D-206ENST00000586863 UNQ6190/PRO20217Q6UXQ8 127 aa8.52□□□□□ -1.05
ATG4D-206ENST00000586863 F8WDY8 70 aa8.51□□□□□ -1.05
ATG4D-206ENST00000586863 HBDP02042 147 aa8.51□□□□□ -1.05
ATG4D-206ENST00000586863 IGLV7-43P04211 117 aa8.51□□□□□ -1.05
ATG4D-206ENST00000586863 TLX1NBP0CAT3 122 aa8.51□□□□□ -1.05
ATG4D-206ENST00000586863 SEC11AP67812 179 aa8.51□□□□□ -1.05
ATG4D-206ENST00000586863 FAM19A2Q8N3H0 131 aa8.51□□□□□ -1.05
ATG4D-206ENST00000586863 CHCHD1Q96BP2 118 aaKnown RBP8.51□□□□□ -1.05
ATG4D-206ENST00000586863 AMELXQ99217 191 aa8.51□□□□□ -1.05
ATG4D-206ENST00000586863 GAGE2EQ4V326 116 aa8.5□□□□□ -1.05
ATG4D-206ENST00000586863 FAM19A5Q7Z5A7 132 aaPredicted RBP8.5□□□□□ -1.05
ATG4D-206ENST00000586863 GAGE2DQ9UEU5 116 aa8.5□□□□□ -1.05
ATG4D-206ENST00000586863 A0A087WZ39 114 aa8.49□□□□□ -1.05
ATG4D-206ENST00000586863 HSBP1O75506 76 aa8.49□□□□□ -1.05
ATG4D-206ENST00000586863 UBE2D1P51668 147 aa8.49□□□□□ -1.05
ATG4D-206ENST00000586863 S100A12P80511 92 aa8.49□□□□□ -1.05
ATG4D-206ENST00000586863 KIAA0087Q14695 138 aa8.49□□□□□ -1.05
ATG4D-206ENST00000586863 ZC2HC1BQ5TFG8 222 aa8.49□□□□□ -1.05
ATG4D-206ENST00000586863 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
ATG4D-206ENST00000586863 PRR26Q8N8Z3 221 aa8.49□□□□□ -1.05
ATG4D-206ENST00000586863 DIRC1Q969H9 104 aa8.49□□□□□ -1.05
ATG4D-206ENST00000586863 PCP4L1A6NKN8 68 aa8.48□□□□□ -1.05
ATG4D-206ENST00000586863 ATP5LO75964 103 aa8.48□□□□□ -1.05
ATG4D-206ENST00000586863 PMCHL1Q16048 86 aa8.48□□□□□ -1.05
ATG4D-206ENST00000586863 LINC00242Q5T6M2 205 aa8.48□□□□□ -1.05
ATG4D-206ENST00000586863 LINC00173Q6ZV60 143 aa8.48□□□□□ -1.05
ATG4D-206ENST00000586863 GEMIN7Q9H840 131 aaKnown RBP8.48□□□□□ -1.05
ATG4D-206ENST00000586863 H0Y9J4 135 aa8.47□□□□□ -1.05
ATG4D-206ENST00000586863 C3orf79P0CE67 100 aa8.47□□□□□ -1.05
ATG4D-206ENST00000586863 HERVK_113P63121 156 aa8.47□□□□□ -1.05
ATG4D-206ENST00000586863 PMVKQ15126 192 aa8.47□□□□□ -1.05
ATG4D-206ENST00000586863 A0A096LNJ9 63 aa8.46□□□□□ -1.06
ATG4D-206ENST00000586863 C2orf82Q6UX34 121 aa8.46□□□□□ -1.06
ATG4D-206ENST00000586863 TRBV30A0A0K0K1B3 111 aa8.45□□□□□ -1.06
ATG4D-206ENST00000586863 M0QXV9 152 aa8.45□□□□□ -1.06
ATG4D-206ENST00000586863 SCGB1D1O95968 90 aa8.45□□□□□ -1.06
ATG4D-206ENST00000586863 KRTAP1-4P0C5Y4 121 aa8.45□□□□□ -1.06
ATG4D-206ENST00000586863 KRTDAPP60985 99 aa8.45□□□□□ -1.06
ATG4D-206ENST00000586863 FAM19A3Q7Z5A8 133 aa8.45□□□□□ -1.06
ATG4D-206ENST00000586863 CST9LQ9H4G1 147 aa8.45□□□□□ -1.06
ATG4D-206ENST00000586863 C9orf129Q5T035 196 aaKnown RBP8.44□□□□□ -1.06
ATG4D-206ENST00000586863 LINC01561Q8N1V8 128 aa8.44□□□□□ -1.06
ATG4D-206ENST00000586863 TINCRA0A1B0GVN0 87 aa8.43□□□□□ -1.06
ATG4D-206ENST00000586863 NDUFC2-KCTD14E9PQ53 114 aa8.43□□□□□ -1.06
ATG4D-206ENST00000586863 PRSS2P07478 247 aa8.43□□□□□ -1.06
ATG4D-206ENST00000586863 UBE2BP63146 152 aa8.43□□□□□ -1.06
ATG4D-206ENST00000586863 LINC00469Q8N7U9 141 aa8.43□□□□□ -1.06
ATG4D-206ENST00000586863 MUC2Q02817 5179 aa8.42□□□□□ -1.06
ATG4D-206ENST00000586863 LINC00587B1AMM8 73 aa8.42□□□□□ -1.06
ATG4D-206ENST00000586863 IFI27L1Q96BM0 104 aa8.42□□□□□ -1.06
ATG4D-206ENST00000586863 PRO1933Q9H354 126 aa8.42□□□□□ -1.06
ATG4D-206ENST00000586863 IGLV1-50A0A075B6I6 118 aa8.41□□□□□ -1.06
ATG4D-206ENST00000586863 LEPROTL1O95214 131 aa8.41□□□□□ -1.06
ATG4D-206ENST00000586863 CDKN2A-AS1Q9UH64 79 aa8.41□□□□□ -1.06
ATG4D-206ENST00000586863 H3BRM9 83 aa8.4□□□□□ -1.06
ATG4D-206ENST00000586863 TOMM7Q9P0U1 55 aa8.4□□□□□ -1.06
ATG4D-206ENST00000586863 SYS1-DBNDD2H3BUS1 97 aa8.39□□□□□ -1.07
ATG4D-206ENST00000586863 CKS1BP61024 79 aa8.39□□□□□ -1.07
ATG4D-206ENST00000586863 C6orf226Q5I0X4 101 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms