RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 COX11Q9Y6N1 276 aa11.89□□□□□ -0.51
RBFOX1-222ENST00000585867 KMT2CQ8NEZ4 4911 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-222ENST00000585867 SACSQ9NZJ4 4579 aa11.89□□□□□ -0.51
RBFOX1-222ENST00000585867 HINT1P49773 126 aaPredicted RBP11.88□□□□□ -0.51
RBFOX1-222ENST00000585867 SRSF9Q13242 221 aaKnown RBP eCLIP11.88□□□□□ -0.51
RBFOX1-222ENST00000585867 C1orf134Q5TEV5 83 aa11.88□□□□□ -0.51
RBFOX1-222ENST00000585867 C6orf223Q8N319 242 aa11.88□□□□□ -0.51
RBFOX1-222ENST00000585867 HYDINQ4G0P3 5121 aa11.87□□□□□ -0.51
RBFOX1-222ENST00000585867 CKS1BP61024 79 aa11.87□□□□□ -0.51
RBFOX1-222ENST00000585867 SNHG12Q9BXW3 62 aa11.87□□□□□ -0.51
RBFOX1-222ENST00000585867 SPAG11BQ08648 103 aa11.86□□□□□ -0.51
RBFOX1-222ENST00000585867 BVES-AS1Q5T3Y7 98 aa11.86□□□□□ -0.51
RBFOX1-222ENST00000585867 Q6ZVH6 145 aa11.86□□□□□ -0.51
RBFOX1-222ENST00000585867 BATFQ16520 125 aa11.85□□□□□ -0.51
RBFOX1-222ENST00000585867 CEND1Q8N111 149 aa11.85□□□□□ -0.51
RBFOX1-222ENST00000585867 TM2D2Q9BX73 214 aa11.85□□□□□ -0.51
RBFOX1-222ENST00000585867 KIAA0087Q14695 138 aa11.84□□□□□ -0.51
RBFOX1-222ENST00000585867 LBHQ53QV2 105 aaPredicted RBP11.84□□□□□ -0.51
RBFOX1-222ENST00000585867 MEIG1Q5JSS6 88 aa11.84□□□□□ -0.51
RBFOX1-222ENST00000585867 SPANXDQ9BXN6 97 aa11.84□□□□□ -0.51
RBFOX1-222ENST00000585867 SPANXCQ9NY87 97 aa11.84□□□□□ -0.51
RBFOX1-222ENST00000585867 RYR2Q92736 4967 aa11.84□□□□□ -0.51
RBFOX1-222ENST00000585867 GCSHP23434 173 aa11.84□□□□□ -0.51
RBFOX1-222ENST00000585867 EREGO14944 169 aa11.83□□□□□ -0.52
RBFOX1-222ENST00000585867 F8WDY8 70 aa11.82□□□□□ -0.52
RBFOX1-222ENST00000585867 ZNF561-AS1K7EIQ3 104 aa11.82□□□□□ -0.52
RBFOX1-222ENST00000585867 COPS9Q8WXC6 57 aa11.82□□□□□ -0.52
RBFOX1-222ENST00000585867 LITAFQ99732 161 aa11.82□□□□□ -0.52
RBFOX1-222ENST00000585867 KMT2AQ03164 3969 aa11.81□□□□□ -0.52
RBFOX1-222ENST00000585867 TMEM238LA0A1B0GVL6 79 aa11.81□□□□□ -0.52
RBFOX1-222ENST00000585867 A6NDN8 102 aa11.81□□□□□ -0.52
RBFOX1-222ENST00000585867 A6NJY4 79 aa11.81□□□□□ -0.52
RBFOX1-222ENST00000585867 PTTG1IPP53801 180 aa11.81□□□□□ -0.52
RBFOX1-222ENST00000585867 DNAH6Q9C0G6 4158 aa11.81□□□□□ -0.52
RBFOX1-222ENST00000585867 Q6ZRN7 208 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-222ENST00000585867 RTL8CO15255 209 aa11.79□□□□□ -0.52
RBFOX1-222ENST00000585867 IFITM1P13164 125 aa11.79□□□□□ -0.52
RBFOX1-222ENST00000585867 COL5A1-AS1Q5SY13 56 aa11.79□□□□□ -0.52
RBFOX1-222ENST00000585867 GVQW2A0A096LPI5 108 aaPredicted RBP11.79□□□□□ -0.52
RBFOX1-222ENST00000585867 PSCAO43653 123 aa11.79□□□□□ -0.52
RBFOX1-222ENST00000585867 RPL24P83731 157 aaKnown RBP11.79□□□□□ -0.52
RBFOX1-222ENST00000585867 C2orf82Q6UX34 121 aa11.79□□□□□ -0.52
RBFOX1-222ENST00000585867 C15orf56Q8N910 161 aa11.79□□□□□ -0.52
RBFOX1-222ENST00000585867 NTN5Q8WTR8 489 aaPredicted RBP11.79□□□□□ -0.52
RBFOX1-222ENST00000585867 C2orf48Q96LS8 159 aa11.79□□□□□ -0.52
RBFOX1-222ENST00000585867 COX17Q14061 63 aa11.78□□□□□ -0.52
RBFOX1-222ENST00000585867 ERG28Q9UKR5 140 aa11.78□□□□□ -0.52
RBFOX1-222ENST00000585867 SMIM13P0DJ93 91 aa11.77□□□□□ -0.53
RBFOX1-222ENST00000585867 FXYD2P54710 66 aa11.76□□□□□ -0.53
RBFOX1-222ENST00000585867 LINC00158P58513 81 aa11.76□□□□□ -0.53
RBFOX1-222ENST00000585867 HIGD2BQ4VC39 106 aa11.76□□□□□ -0.53
RBFOX1-222ENST00000585867 ADAMTSL4-AS1Q5T5F5 129 aa11.76□□□□□ -0.53
RBFOX1-222ENST00000585867 PPDPFQ9H3Y8 114 aa11.76□□□□□ -0.53
RBFOX1-222ENST00000585867 CAMK2N2Q96S95 79 aa11.75□□□□□ -0.53
RBFOX1-222ENST00000585867 MUSTN1Q8IVN3 82 aa11.75□□□□□ -0.53
RBFOX1-222ENST00000585867 TRBV30A0A0K0K1B3 111 aa11.74□□□□□ -0.53
RBFOX1-222ENST00000585867 USP17L23D6RBM5 183 aa11.74□□□□□ -0.53
RBFOX1-222ENST00000585867 RYR3Q15413 4870 aa11.73□□□□□ -0.53
RBFOX1-222ENST00000585867 A0A0U1RRA0 63 aa11.73□□□□□ -0.53
RBFOX1-222ENST00000585867 PFN2P35080 140 aa11.73□□□□□ -0.53
RBFOX1-222ENST00000585867 TNP2Q05952 138 aa11.73□□□□□ -0.53
RBFOX1-222ENST00000585867 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.72□□□□□ -0.53
RBFOX1-222ENST00000585867 UNQ6190/PRO20217Q6UXQ8 127 aa11.72□□□□□ -0.53
RBFOX1-222ENST00000585867 LINC00336Q6ZUF6 198 aa11.72□□□□□ -0.53
RBFOX1-222ENST00000585867 MIR7-3HGQ8N6C7 128 aa11.72□□□□□ -0.53
RBFOX1-222ENST00000585867 DAND5Q8N907 189 aa11.72□□□□□ -0.53
RBFOX1-222ENST00000585867 LINC00308Q8TCZ7 52 aa11.72□□□□□ -0.53
RBFOX1-222ENST00000585867 LINC00526Q96FQ7 95 aa11.72□□□□□ -0.53
RBFOX1-222ENST00000585867 NHP2Q9NX24 153 aaKnown RBP11.72□□□□□ -0.53
RBFOX1-222ENST00000585867 C14orf177Q52M58 125 aa11.71□□□□□ -0.54
RBFOX1-222ENST00000585867 C10orf25Q5T742 122 aa11.71□□□□□ -0.54
RBFOX1-222ENST00000585867 A0A1B0GWB2 263 aa11.7□□□□□ -0.54
RBFOX1-222ENST00000585867 A4D1N5 150 aa11.7□□□□□ -0.54
RBFOX1-222ENST00000585867 LRCOL1A6NCL2 159 aa11.69□□□□□ -0.54
RBFOX1-222ENST00000585867 NPC2P61916 151 aa11.69□□□□□ -0.54
RBFOX1-222ENST00000585867 SYCNQ0VAF6 134 aa11.69□□□□□ -0.54
RBFOX1-222ENST00000585867 C6orf48Q9UBA6 75 aa11.69□□□□□ -0.54
RBFOX1-222ENST00000585867 A0A087WTM6 91 aa11.68□□□□□ -0.54
RBFOX1-222ENST00000585867 LECT2O14960 151 aa11.68□□□□□ -0.54
RBFOX1-222ENST00000585867 DNAH2Q9P225 4427 aa11.68□□□□□ -0.54
RBFOX1-222ENST00000585867 RNF151Q2KHN1 245 aa11.67□□□□□ -0.54
RBFOX1-222ENST00000585867 Q6ZRU5 148 aa11.67□□□□□ -0.54
RBFOX1-222ENST00000585867 A0A0B4J2C4 111 aa11.67□□□□□ -0.54
RBFOX1-222ENST00000585867 WFDC2Q14508 124 aa11.67□□□□□ -0.54
RBFOX1-222ENST00000585867 CARD19Q96LW7 228 aa11.67□□□□□ -0.54
RBFOX1-222ENST00000585867 C9orf116Q5BN46 136 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-222ENST00000585867 RAB37Q96AX2 223 aa11.66□□□□□ -0.54
RBFOX1-222ENST00000585867 SOSTDC1Q6X4U4 206 aa11.65□□□□□ -0.54
RBFOX1-222ENST00000585867 LOC107984156A0A0G2JMH3 177 aa11.64□□□□□ -0.55
RBFOX1-222ENST00000585867 CFC1BP0CG36 223 aa11.64□□□□□ -0.55
RBFOX1-222ENST00000585867 CFC1P0CG37 223 aa11.64□□□□□ -0.55
RBFOX1-222ENST00000585867 ARL17AQ8IVW1 177 aa11.64□□□□□ -0.55
RBFOX1-222ENST00000585867 K7ERJ3 54 aa11.63□□□□□ -0.55
RBFOX1-222ENST00000585867 TAX1BP3O14907 124 aa11.63□□□□□ -0.55
RBFOX1-222ENST00000585867 SND1-IT1Q9HBX3 110 aa11.63□□□□□ -0.55
RBFOX1-222ENST00000585867 DNAH10Q8IVF4 4471 aa11.62□□□□□ -0.55
RBFOX1-222ENST00000585867 NDUFC2-KCTD14E9PQ53 114 aa11.62□□□□□ -0.55
RBFOX1-222ENST00000585867 EIF4EBP3O60516 100 aaPredicted RBP11.62□□□□□ -0.55
RBFOX1-222ENST00000585867 Q8N814 137 aa11.62□□□□□ -0.55
RBFOX1-222ENST00000585867 PRO1854Q9UHT4 67 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms