RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 RYR3Q15413 4870 aa7.65□□□□□ -1.19
CDRT1-207ENST00000583965 F8WDY8 70 aa7.64□□□□□ -1.19
CDRT1-207ENST00000583965 J3QQQ9 107 aa7.64□□□□□ -1.19
CDRT1-207ENST00000583965 SPINK8P0C7L1 97 aa7.64□□□□□ -1.19
CDRT1-207ENST00000583965 SPAG11BQ08648 103 aa7.64□□□□□ -1.19
CDRT1-207ENST00000583965 HIGD2BQ4VC39 106 aa7.64□□□□□ -1.19
CDRT1-207ENST00000583965 Q8IZM0 81 aa7.64□□□□□ -1.19
CDRT1-207ENST00000583965 FAT2Q9NYQ8 4349 aa7.64□□□□□ -1.19
CDRT1-207ENST00000583965 MYMXA0A1B0GTQ4 84 aa7.63□□□□□ -1.19
CDRT1-207ENST00000583965 PRSS2P07478 247 aa7.63□□□□□ -1.19
CDRT1-207ENST00000583965 TSPEAR-AS2P59090 65 aa7.63□□□□□ -1.19
CDRT1-207ENST00000583965 NTN5Q8WTR8 489 aaPredicted RBP7.63□□□□□ -1.19
CDRT1-207ENST00000583965 C2orf48Q96LS8 159 aa7.63□□□□□ -1.19
CDRT1-207ENST00000583965 LGALS3P17931 250 aaKnown RBP7.62□□□□□ -1.19
CDRT1-207ENST00000583965 CNBPP62633 177 aaKnown RBP7.62□□□□□ -1.19
CDRT1-207ENST00000583965 CTAG1AP78358 180 aa7.62□□□□□ -1.19
CDRT1-207ENST00000583965 KIAA0087Q14695 138 aa7.62□□□□□ -1.19
CDRT1-207ENST00000583965 C6orf226Q5I0X4 101 aa7.62□□□□□ -1.19
CDRT1-207ENST00000583965 COX7B2Q8TF08 81 aa7.62□□□□□ -1.19
CDRT1-207ENST00000583965 TTTY13Q9BZ97 58 aa7.62□□□□□ -1.19
CDRT1-207ENST00000583965 TOMM7Q9P0U1 55 aa7.62□□□□□ -1.19
CDRT1-207ENST00000583965 TP73-AS1Q9UF72 201 aa7.62□□□□□ -1.19
CDRT1-207ENST00000583965 HECTD4Q9Y4D8 3996 aa7.62□□□□□ -1.19
CDRT1-207ENST00000583965 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.61□□□□□ -1.19
CDRT1-207ENST00000583965 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.61□□□□□ -1.19
CDRT1-207ENST00000583965 ZNF815PA8K554 130 aa7.61□□□□□ -1.19
CDRT1-207ENST00000583965 CXCL5P42830 114 aa7.61□□□□□ -1.19
CDRT1-207ENST00000583965 PGPEP1Q9NXJ5 209 aa7.61□□□□□ -1.19
CDRT1-207ENST00000583965 PKD1P98161 4303 aa7.61□□□□□ -1.19
CDRT1-207ENST00000583965 NDUFA1O15239 70 aa7.6□□□□□ -1.19
CDRT1-207ENST00000583965 CKS1BP61024 79 aa7.6□□□□□ -1.19
CDRT1-207ENST00000583965 SFTA2Q6UW10 78 aa7.6□□□□□ -1.19
CDRT1-207ENST00000583965 LINC00526Q96FQ7 95 aa7.6□□□□□ -1.19
CDRT1-207ENST00000583965 CAMK2N2Q96S95 79 aa7.6□□□□□ -1.19
CDRT1-207ENST00000583965 A0A1B0GVY2 172 aa7.59□□□□□ -1.19
CDRT1-207ENST00000583965 M0R143 59 aa7.59□□□□□ -1.19
CDRT1-207ENST00000583965 HSD52Q0P140 79 aa7.59□□□□□ -1.19
CDRT1-207ENST00000583965 SYCNQ0VAF6 134 aa7.59□□□□□ -1.19
CDRT1-207ENST00000583965 TAL2Q16559 108 aa7.59□□□□□ -1.19
CDRT1-207ENST00000583965 CARD19Q96LW7 228 aa7.59□□□□□ -1.19
CDRT1-207ENST00000583965 IGLV5-52A0A0A0MRZ9 124 aa7.58□□□□□ -1.2
CDRT1-207ENST00000583965 SLPIP03973 132 aa7.58□□□□□ -1.2
CDRT1-207ENST00000583965 RNF151Q2KHN1 245 aa7.58□□□□□ -1.2
CDRT1-207ENST00000583965 LBHQ53QV2 105 aaPredicted RBP7.58□□□□□ -1.2
CDRT1-207ENST00000583965 SNHG12Q9BXW3 62 aa7.58□□□□□ -1.2
CDRT1-207ENST00000583965 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
CDRT1-207ENST00000583965 TRBV30A0A0K0K1B3 111 aa7.57□□□□□ -1.2
CDRT1-207ENST00000583965 KRTAP10-2P60368 255 aa7.57□□□□□ -1.2
CDRT1-207ENST00000583965 Q6ZRU5 148 aa7.57□□□□□ -1.2
CDRT1-207ENST00000583965 C9orf163Q8N9P6 203 aa7.57□□□□□ -1.2
CDRT1-207ENST00000583965 SPANXB1Q9NS25 103 aaPredicted RBP7.57□□□□□ -1.2
CDRT1-207ENST00000583965 NDUFA12Q9UI09 145 aa7.57□□□□□ -1.2
CDRT1-207ENST00000583965 PKIGQ9Y2B9 76 aa7.57□□□□□ -1.2
CDRT1-207ENST00000583965 BVES-AS1Q5T3Y7 98 aa7.56□□□□□ -1.2
CDRT1-207ENST00000583965 C2orf82Q6UX34 121 aa7.56□□□□□ -1.2
CDRT1-207ENST00000583965 UNQ6190/PRO20217Q6UXQ8 127 aa7.56□□□□□ -1.2
CDRT1-207ENST00000583965 A0A0J9YXY3 114 aa7.55□□□□□ -1.2
CDRT1-207ENST00000583965 TIMM17BO60830 172 aa7.55□□□□□ -1.2
CDRT1-207ENST00000583965 C10orf25Q5T742 122 aa7.55□□□□□ -1.2
CDRT1-207ENST00000583965 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
CDRT1-207ENST00000583965 ZNF625Q96I27 306 aaPredicted RBP7.55□□□□□ -1.2
CDRT1-207ENST00000583965 PKHD1P08F94 4074 aa7.54□□□□□ -1.2
CDRT1-207ENST00000583965 HERV-K104P63124 156 aa7.54□□□□□ -1.2
CDRT1-207ENST00000583965 C6orf48Q9UBA6 75 aa7.54□□□□□ -1.2
CDRT1-207ENST00000583965 TMEM238C9JI98 176 aa7.53□□□□□ -1.2
CDRT1-207ENST00000583965 GCSHP23434 173 aa7.53□□□□□ -1.2
CDRT1-207ENST00000583965 HINT1P49773 126 aaPredicted RBP7.53□□□□□ -1.2
CDRT1-207ENST00000583965 Q6ZVH6 145 aa7.53□□□□□ -1.2
CDRT1-207ENST00000583965 CEND1Q8N111 149 aa7.53□□□□□ -1.2
CDRT1-207ENST00000583965 LOC107984640A0A0U1RRK4 108 aa7.52□□□□□ -1.21
CDRT1-207ENST00000583965 TLX1NBP0CAT3 122 aa7.52□□□□□ -1.21
CDRT1-207ENST00000583965 FUSP35637 526 aaKnown RBP eCLIP7.52□□□□□ -1.21
CDRT1-207ENST00000583965 COX17Q14061 63 aa7.52□□□□□ -1.21
CDRT1-207ENST00000583965 LITAFQ99732 161 aa7.52□□□□□ -1.21
CDRT1-207ENST00000583965 SPANXDQ9BXN6 97 aa7.52□□□□□ -1.21
CDRT1-207ENST00000583965 SPANXCQ9NY87 97 aa7.52□□□□□ -1.21
CDRT1-207ENST00000583965 C16orf90A8MZG2 172 aa7.51□□□□□ -1.21
CDRT1-207ENST00000583965 SDIM1Q6ZPB5 146 aa7.51□□□□□ -1.21
CDRT1-207ENST00000583965 HIST1H4GQ99525 98 aa7.51□□□□□ -1.21
CDRT1-207ENST00000583965 PPDPFQ9H3Y8 114 aa7.51□□□□□ -1.21
CDRT1-207ENST00000583965 NDUFC2-KCTD14E9PQ53 114 aa7.5□□□□□ -1.21
CDRT1-207ENST00000583965 C9orf116Q5BN46 136 aaPredicted RBP7.5□□□□□ -1.21
CDRT1-207ENST00000583965 COL5A1-AS1Q5SY13 56 aa7.5□□□□□ -1.21
CDRT1-207ENST00000583965 ERG28Q9UKR5 140 aa7.5□□□□□ -1.21
CDRT1-207ENST00000583965 PTTG1IPP53801 180 aa7.49□□□□□ -1.21
CDRT1-207ENST00000583965 FXYD2P54710 66 aa7.49□□□□□ -1.21
CDRT1-207ENST00000583965 SRSF9Q13242 221 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDRT1-207ENST00000583965 CIRBPQ14011 172 aaKnown RBP7.49□□□□□ -1.21
CDRT1-207ENST00000583965 BATFQ16520 125 aa7.49□□□□□ -1.21
CDRT1-207ENST00000583965 LINC01620Q4KN68 170 aa7.49□□□□□ -1.21
CDRT1-207ENST00000583965 LINC00474Q9P2X8 69 aa7.49□□□□□ -1.21
CDRT1-207ENST00000583965 A6NDN8 102 aa7.48□□□□□ -1.21
CDRT1-207ENST00000583965 IFITM1P13164 125 aa7.48□□□□□ -1.21
CDRT1-207ENST00000583965 RPL18AQ02543 176 aaKnown RBP7.48□□□□□ -1.21
CDRT1-207ENST00000583965 MEIG1Q5JSS6 88 aa7.48□□□□□ -1.21
CDRT1-207ENST00000583965 DNAH5Q8TE73 4624 aa7.48□□□□□ -1.21
CDRT1-207ENST00000583965 TMEM238LA0A1B0GVL6 79 aa7.47□□□□□ -1.21
CDRT1-207ENST00000583965 A0A1B0GWB2 263 aa7.47□□□□□ -1.21
CDRT1-207ENST00000583965 A6NJY4 79 aa7.47□□□□□ -1.21
CDRT1-207ENST00000583965 PFN2P35080 140 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms