RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 FABP2P12104 132 aa7.3□□□□□ -1.24
TOP3A-216ENST00000583804 HIST1H4GQ99525 98 aa7.3□□□□□ -1.24
TOP3A-216ENST00000583804 CDKN2A-AS1Q9UH64 79 aa7.3□□□□□ -1.24
TOP3A-216ENST00000583804 CBY1Q9Y3M2 126 aa7.3□□□□□ -1.24
TOP3A-216ENST00000583804 RYR2Q92736 4967 aa7.3□□□□□ -1.24
TOP3A-216ENST00000583804 DNAH6Q9C0G6 4158 aa7.3□□□□□ -1.24
TOP3A-216ENST00000583804 TINCRA0A1B0GVN0 87 aa7.3□□□□□ -1.24
TOP3A-216ENST00000583804 ZNF815PA8K554 130 aa7.3□□□□□ -1.24
TOP3A-216ENST00000583804 RAB37Q96AX2 223 aa7.3□□□□□ -1.24
TOP3A-216ENST00000583804 SPANXB1Q9NS25 103 aaPredicted RBP7.3□□□□□ -1.24
TOP3A-216ENST00000583804 NHP2Q9NX24 153 aaKnown RBP7.3□□□□□ -1.24
TOP3A-216ENST00000583804 RTL8CO15255 209 aa7.29□□□□□ -1.24
TOP3A-216ENST00000583804 Q6ZRN7 208 aaPredicted RBP7.29□□□□□ -1.24
TOP3A-216ENST00000583804 SPCS1Q9Y6A9 102 aa7.29□□□□□ -1.24
TOP3A-216ENST00000583804 TMEM238LA0A1B0GVL6 79 aa7.28□□□□□ -1.24
TOP3A-216ENST00000583804 A6NJY4 79 aa7.28□□□□□ -1.24
TOP3A-216ENST00000583804 HERVK_113P63121 156 aa7.28□□□□□ -1.24
TOP3A-216ENST00000583804 DNAH2Q9P225 4427 aa7.27□□□□□ -1.25
TOP3A-216ENST00000583804 LEPROTO15243 131 aa7.27□□□□□ -1.25
TOP3A-216ENST00000583804 SMCPP49901 116 aaPredicted RBP7.27□□□□□ -1.25
TOP3A-216ENST00000583804 OCIAD2Q56VL3 154 aa7.27□□□□□ -1.25
TOP3A-216ENST00000583804 KRTAP26-1Q6PEX3 210 aa7.27□□□□□ -1.25
TOP3A-216ENST00000583804 HYDINQ4G0P3 5121 aa7.27□□□□□ -1.25
TOP3A-216ENST00000583804 TMEM223A0PJW6 202 aa7.26□□□□□ -1.25
TOP3A-216ENST00000583804 K7ERJ3 54 aa7.26□□□□□ -1.25
TOP3A-216ENST00000583804 LECT2O14960 151 aa7.26□□□□□ -1.25
TOP3A-216ENST00000583804 TNP2Q05952 138 aa7.26□□□□□ -1.25
TOP3A-216ENST00000583804 FOXI1Q12951 378 aa7.26□□□□□ -1.25
TOP3A-216ENST00000583804 CD164L2Q6UWJ8 174 aa7.26□□□□□ -1.25
TOP3A-216ENST00000583804 PLEKHB2Q96CS7 222 aa7.26□□□□□ -1.25
TOP3A-216ENST00000583804 TOMM7Q9P0U1 55 aa7.26□□□□□ -1.25
TOP3A-216ENST00000583804 J3QQQ9 107 aa7.25□□□□□ -1.25
TOP3A-216ENST00000583804 K7ERU9 68 aa7.25□□□□□ -1.25
TOP3A-216ENST00000583804 COX7A2LO14548 114 aa7.25□□□□□ -1.25
TOP3A-216ENST00000583804 MALP21145 153 aa7.25□□□□□ -1.25
TOP3A-216ENST00000583804 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
TOP3A-216ENST00000583804 SCGB1D4Q6XE38 83 aa7.25□□□□□ -1.25
TOP3A-216ENST00000583804 NAA38Q9BRA0 125 aaKnown RBP7.25□□□□□ -1.25
TOP3A-216ENST00000583804 IGLV5-45A0A087WSX0 123 aa7.24□□□□□ -1.25
TOP3A-216ENST00000583804 IGHV3OR16-9A0A0B4J2B5 98 aa7.24□□□□□ -1.25
TOP3A-216ENST00000583804 SMIM1B2RUZ4 78 aa7.24□□□□□ -1.25
TOP3A-216ENST00000583804 LINC00336Q6ZUF6 198 aa7.24□□□□□ -1.25
TOP3A-216ENST00000583804 FAM19A3Q7Z5A8 133 aa7.24□□□□□ -1.25
TOP3A-216ENST00000583804 LINC00526Q96FQ7 95 aa7.24□□□□□ -1.25
TOP3A-216ENST00000583804 EPPK1P58107 5090 aaKnown RBP7.24□□□□□ -1.25
TOP3A-216ENST00000583804 A0A087WTM6 91 aa7.24□□□□□ -1.25
TOP3A-216ENST00000583804 LGALS3P17931 250 aaKnown RBP7.24□□□□□ -1.25
TOP3A-216ENST00000583804 HIGD2BQ4VC39 106 aa7.24□□□□□ -1.25
TOP3A-216ENST00000583804 LINC00528Q8N1L1 170 aa7.24□□□□□ -1.25
TOP3A-216ENST00000583804 A0A087WZ39 114 aa7.23□□□□□ -1.25
TOP3A-216ENST00000583804 LRCOL1A6NCL2 159 aa7.23□□□□□ -1.25
TOP3A-216ENST00000583804 SRSF9Q13242 221 aaKnown RBP eCLIP7.23□□□□□ -1.25
TOP3A-216ENST00000583804 WFDC2Q14508 124 aa7.23□□□□□ -1.25
TOP3A-216ENST00000583804 DNAH10Q8IVF4 4471 aa7.23□□□□□ -1.25
TOP3A-216ENST00000583804 BIRC6Q9NR09 4857 aa7.23□□□□□ -1.25
TOP3A-216ENST00000583804 USP17L23D6RBM5 183 aa7.22□□□□□ -1.25
TOP3A-216ENST00000583804 CFAP161Q6P656 301 aa7.22□□□□□ -1.25
TOP3A-216ENST00000583804 IGHV1-58A0A0C4DH39 117 aa7.21□□□□□ -1.26
TOP3A-216ENST00000583804 F8W1H4 67 aa7.21□□□□□ -1.26
TOP3A-216ENST00000583804 SPAG11BQ08648 103 aa7.21□□□□□ -1.26
TOP3A-216ENST00000583804 LCE2BO14633 110 aa7.2□□□□□ -1.26
TOP3A-216ENST00000583804 APOMO95445 188 aa7.2□□□□□ -1.26
TOP3A-216ENST00000583804 LYRM7Q5U5X0 104 aa7.2□□□□□ -1.26
TOP3A-216ENST00000583804 Q8N814 137 aa7.2□□□□□ -1.26
TOP3A-216ENST00000583804 COX7B2Q8TF08 81 aa7.2□□□□□ -1.26
TOP3A-216ENST00000583804 ZNF625Q96I27 306 aaPredicted RBP7.2□□□□□ -1.26
TOP3A-216ENST00000583804 DNAH17Q9UFH2 4485 aa7.2□□□□□ -1.26
TOP3A-216ENST00000583804 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.19□□□□□ -1.26
TOP3A-216ENST00000583804 TMEM238C9JI98 176 aa7.19□□□□□ -1.26
TOP3A-216ENST00000583804 PRSS2P07478 247 aa7.19□□□□□ -1.26
TOP3A-216ENST00000583804 C14orf177Q52M58 125 aa7.19□□□□□ -1.26
TOP3A-216ENST00000583804 C15orf56Q8N910 161 aa7.19□□□□□ -1.26
TOP3A-216ENST00000583804 IGLV5-39A0A0G2JS06 123 aa7.18□□□□□ -1.26
TOP3A-216ENST00000583804 C2orf82Q6UX34 121 aa7.18□□□□□ -1.26
TOP3A-216ENST00000583804 A0A0U1RRA0 63 aa7.17□□□□□ -1.26
TOP3A-216ENST00000583804 ZNF561-AS1K7EIQ3 104 aa7.17□□□□□ -1.26
TOP3A-216ENST00000583804 TSPAN13O95857 204 aa7.17□□□□□ -1.26
TOP3A-216ENST00000583804 FUSP35637 526 aaKnown RBP eCLIP7.17□□□□□ -1.26
TOP3A-216ENST00000583804 FRAS1Q86XX4 4008 aa7.17□□□□□ -1.26
TOP3A-216ENST00000583804 A0A0B4J2C4 111 aa7.17□□□□□ -1.26
TOP3A-216ENST00000583804 A0A0J9YXY3 114 aa7.17□□□□□ -1.26
TOP3A-216ENST00000583804 RPL24P83731 157 aaKnown RBP7.17□□□□□ -1.26
TOP3A-216ENST00000583804 RNF151Q2KHN1 245 aa7.17□□□□□ -1.26
TOP3A-216ENST00000583804 C6orf226Q5I0X4 101 aa7.17□□□□□ -1.26
TOP3A-216ENST00000583804 LINC01561Q8N1V8 128 aa7.17□□□□□ -1.26
TOP3A-216ENST00000583804 NDUFA12Q9UI09 145 aa7.17□□□□□ -1.26
TOP3A-216ENST00000583804 PRO0461Q9UI25 63 aa7.17□□□□□ -1.26
TOP3A-216ENST00000583804 GVQW2A0A096LPI5 108 aaPredicted RBP7.16□□□□□ -1.26
TOP3A-216ENST00000583804 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.16□□□□□ -1.26
TOP3A-216ENST00000583804 TIMM17BO60830 172 aa7.16□□□□□ -1.26
TOP3A-216ENST00000583804 CFC1BP0CG36 223 aa7.16□□□□□ -1.26
TOP3A-216ENST00000583804 CFC1P0CG37 223 aa7.16□□□□□ -1.26
TOP3A-216ENST00000583804 VPS25Q9BRG1 176 aa7.16□□□□□ -1.26
TOP3A-216ENST00000583804 SPANXDQ9BXN6 97 aa7.16□□□□□ -1.26
TOP3A-216ENST00000583804 SPANXCQ9NY87 97 aa7.16□□□□□ -1.26
TOP3A-216ENST00000583804 PRO1854Q9UHT4 67 aa7.16□□□□□ -1.26
TOP3A-216ENST00000583804 FAT2Q9NYQ8 4349 aa7.16□□□□□ -1.26
TOP3A-216ENST00000583804 TRBV20-1A0A075B6N2 111 aa7.15□□□□□ -1.27
TOP3A-216ENST00000583804 KRTAP10-2P60368 255 aa7.15□□□□□ -1.27
TOP3A-216ENST00000583804 CKS1BP61024 79 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 1033.9 ms