RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 TMEM89A2RUT3 159 aa7.48□□□□□ -1.21
TOP3A-214ENST00000582981 C11orf72Q8NBR9 251 aa7.48□□□□□ -1.21
TOP3A-214ENST00000582981 LINC00242Q5T6M2 205 aa7.47□□□□□ -1.21
TOP3A-214ENST00000582981 NDUFC2O95298 119 aa7.46□□□□□ -1.21
TOP3A-214ENST00000582981 LINC00337Q8N6G1 96 aa7.46□□□□□ -1.21
TOP3A-214ENST00000582981 NOP10Q9NPE3 64 aaKnown RBP7.46□□□□□ -1.21
TOP3A-214ENST00000582981 RPL36AP83881 106 aaKnown RBP7.46□□□□□ -1.22
TOP3A-214ENST00000582981 ODF3L2Q3SX64 289 aa7.46□□□□□ -1.22
TOP3A-214ENST00000582981 NTM-AS1Q6ZSK4 140 aa7.46□□□□□ -1.22
TOP3A-214ENST00000582981 BRK1Q8WUW1 75 aa7.46□□□□□ -1.22
TOP3A-214ENST00000582981 RPL36ALQ969Q0 106 aaKnown RBP7.46□□□□□ -1.22
TOP3A-214ENST00000582981 XCL1P47992 114 aa7.46□□□□□ -1.22
TOP3A-214ENST00000582981 SMIM11BQ8TCY0 68 aa7.46□□□□□ -1.22
TOP3A-214ENST00000582981 SNURFQ9Y675 71 aa7.46□□□□□ -1.22
TOP3A-214ENST00000582981 TRAV13-2A0A0B4J235 113 aa7.45□□□□□ -1.22
TOP3A-214ENST00000582981 SND1-IT1Q9HBX3 110 aa7.45□□□□□ -1.22
TOP3A-214ENST00000582981 INSP01308 110 aa7.45□□□□□ -1.22
TOP3A-214ENST00000582981 STHQ8IWL8 128 aa7.45□□□□□ -1.22
TOP3A-214ENST00000582981 MIR7-3HGQ8N6C7 128 aa7.45□□□□□ -1.22
TOP3A-214ENST00000582981 Q96MF0 132 aa7.45□□□□□ -1.22
TOP3A-214ENST00000582981 C1orf158Q8N1D5 194 aa7.44□□□□□ -1.22
TOP3A-214ENST00000582981 LINC00158P58513 81 aa7.44□□□□□ -1.22
TOP3A-214ENST00000582981 SMIM1B2RUZ4 78 aa7.44□□□□□ -1.22
TOP3A-214ENST00000582981 DEFB114Q30KQ6 69 aa7.44□□□□□ -1.22
TOP3A-214ENST00000582981 Q6YL49 198 aa7.44□□□□□ -1.22
TOP3A-214ENST00000582981 IGHV4-31P0DP07 118 aa7.43□□□□□ -1.22
TOP3A-214ENST00000582981 CLPSL2Q6UWE3 100 aa7.43□□□□□ -1.22
TOP3A-214ENST00000582981 A0A096LNT2 108 aa7.43□□□□□ -1.22
TOP3A-214ENST00000582981 ZNF843Q8N446 348 aa7.43□□□□□ -1.22
TOP3A-214ENST00000582981 A0A096LPF7 62 aa7.42□□□□□ -1.22
TOP3A-214ENST00000582981 UBR5O95071 2799 aaPredicted RBP7.42□□□□□ -1.22
TOP3A-214ENST00000582981 RBM3P98179 157 aaKnown RBP7.42□□□□□ -1.22
TOP3A-214ENST00000582981 TRGV2A0A075B6R0 118 aa7.42□□□□□ -1.22
TOP3A-214ENST00000582981 PAX4O43316 350 aa7.42□□□□□ -1.22
TOP3A-214ENST00000582981 SERP1Q9Y6X1 66 aa7.42□□□□□ -1.22
TOP3A-214ENST00000582981 OVOL2Q9BRP0 275 aa7.41□□□□□ -1.22
TOP3A-214ENST00000582981 LINC00474Q9P2X8 69 aa7.41□□□□□ -1.22
TOP3A-214ENST00000582981 TENM4Q6N022 2769 aa7.41□□□□□ -1.22
TOP3A-214ENST00000582981 IGKV2-28A0A075B6P5 120 aa7.41□□□□□ -1.22
TOP3A-214ENST00000582981 IGLV5-39A0A0G2JS06 123 aa7.41□□□□□ -1.22
TOP3A-214ENST00000582981 IGKV2D-28P01615 120 aa7.41□□□□□ -1.22
TOP3A-214ENST00000582981 ATRQ13535 2644 aa7.4□□□□□ -1.22
TOP3A-214ENST00000582981 NDUFC2-KCTD14E9PQ53 114 aa7.4□□□□□ -1.22
TOP3A-214ENST00000582981 TMEM86BQ8N661 226 aa7.4□□□□□ -1.22
TOP3A-214ENST00000582981 RMI2Q96E14 147 aa7.4□□□□□ -1.22
TOP3A-214ENST00000582981 H7BZZ5 65 aa7.4□□□□□ -1.23
TOP3A-214ENST00000582981 UBE2L6O14933 153 aa7.4□□□□□ -1.23
TOP3A-214ENST00000582981 ORMDL1Q9P0S3 153 aa7.4□□□□□ -1.23
TOP3A-214ENST00000582981 F8WDY8 70 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 K7EQD1 137 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 IGLV4-60A0A075B6I1 120 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 IGLV5-45A0A087WSX0 123 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 CCKP06307 115 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 SEC61GP60059 68 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 F8WEM9 126 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 H0YGX0 51 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 S100A7L2Q5SY68 101 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 MPLKIPQ8TAP9 179 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 UBL5Q9BZL1 73 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 V9GYY9 64 aa7.39□□□□□ -1.23
TOP3A-214ENST00000582981 FLNBO75369 2602 aaKnown RBP7.38□□□□□ -1.23
TOP3A-214ENST00000582981 PF4P02776 101 aa7.38□□□□□ -1.23
TOP3A-214ENST00000582981 DEFB130BP0DP73 79 aa7.38□□□□□ -1.23
TOP3A-214ENST00000582981 DEFB130AP0DP74 79 aa7.38□□□□□ -1.23
TOP3A-214ENST00000582981 HAMPP81172 84 aa7.38□□□□□ -1.23
TOP3A-214ENST00000582981 FP248Q71RG6 208 aaPredicted RBP7.38□□□□□ -1.23
TOP3A-214ENST00000582981 TEP1Q99973 2627 aaKnown RBP7.38□□□□□ -1.23
TOP3A-214ENST00000582981 ESM1Q9NQ30 184 aa7.38□□□□□ -1.23
TOP3A-214ENST00000582981 UNC79Q9P2D8 2635 aa7.37□□□□□ -1.23
TOP3A-214ENST00000582981 C1orf195Q5TG92 126 aa7.37□□□□□ -1.23
TOP3A-214ENST00000582981 CDC42SE2Q9NRR3 84 aa7.37□□□□□ -1.23
TOP3A-214ENST00000582981 TENM1Q9UKZ4 2725 aa7.37□□□□□ -1.23
TOP3A-214ENST00000582981 LYPD5Q6UWN5 251 aa7.37□□□□□ -1.23
TOP3A-214ENST00000582981 SMIM26A0A096LP01 95 aa7.37□□□□□ -1.23
TOP3A-214ENST00000582981 C4orf3Q8WVX3 66 aa7.37□□□□□ -1.23
TOP3A-214ENST00000582981 TRGV4A0A0C4DH28 118 aa7.36□□□□□ -1.23
TOP3A-214ENST00000582981 CCL18P55774 89 aa7.36□□□□□ -1.23
TOP3A-214ENST00000582981 CCL24O00175 119 aa7.36□□□□□ -1.23
TOP3A-214ENST00000582981 OBSCN-AS1Q96MR7 158 aa7.36□□□□□ -1.23
TOP3A-214ENST00000582981 SS18Q15532 418 aa7.35□□□□□ -1.23
TOP3A-214ENST00000582981 PRR3P79522 188 aaKnown RBP7.35□□□□□ -1.23
TOP3A-214ENST00000582981 DEFB4AO15263 64 aa7.35□□□□□ -1.23
TOP3A-214ENST00000582981 DSCR9P59020 149 aa7.34□□□□□ -1.23
TOP3A-214ENST00000582981 C16orf95Q9H693 158 aa7.34□□□□□ -1.23
TOP3A-214ENST00000582981 TRRAPQ9Y4A5 3859 aa7.34□□□□□ -1.23
TOP3A-214ENST00000582981 TRAV10A0A0B4J240 114 aa7.34□□□□□ -1.23
TOP3A-214ENST00000582981 DNAJC9-AS1A6NH13 148 aa7.34□□□□□ -1.23
TOP3A-214ENST00000582981 GIG44P09565 113 aaPredicted RBP7.34□□□□□ -1.23
TOP3A-214ENST00000582981 Q8N3U1 123 aa7.34□□□□□ -1.23
TOP3A-214ENST00000582981 COX7B2Q8TF08 81 aa7.34□□□□□ -1.23
TOP3A-214ENST00000582981 TRBV7-6A0A0J9YX20 115 aa7.33□□□□□ -1.24
TOP3A-214ENST00000582981 A8MTW9 85 aa7.33□□□□□ -1.24
TOP3A-214ENST00000582981 ATP5EP2Q5VTU8 51 aa7.33□□□□□ -1.24
TOP3A-214ENST00000582981 PDZD2O15018 2839 aa7.33□□□□□ -1.24
TOP3A-214ENST00000582981 FSHBP01225 129 aa7.33□□□□□ -1.24
TOP3A-214ENST00000582981 IGLV10-54A0A075B6I4 117 aa7.33□□□□□ -1.24
TOP3A-214ENST00000582981 TRAV7A0A075B6U4 112 aa7.33□□□□□ -1.24
TOP3A-214ENST00000582981 PKD1L1Q8TDX9 2849 aa7.32□□□□□ -1.24
TOP3A-214ENST00000582981 JMJD7-PLA2G4BH0Y9G9 81 aa7.31□□□□□ -1.24
TOP3A-214ENST00000582981 HIVEP1P15822 2718 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms