RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 LAMTOR3Q9UHA4 124 aa6.92□□□□□ -1.3
TRAPPC8-211ENST00000582539 PLA2G2DQ9UNK4 145 aa6.92□□□□□ -1.3
TRAPPC8-211ENST00000582539 TRAV23DV6A0A075B6W5 121 aa6.92□□□□□ -1.3
TRAPPC8-211ENST00000582539 SONP18583 2426 aaKnown RBP6.92□□□□□ -1.3
TRAPPC8-211ENST00000582539 TLX1NBP0CAT3 122 aa6.91□□□□□ -1.3
TRAPPC8-211ENST00000582539 LINC00643Q86TS7 51 aa6.91□□□□□ -1.3
TRAPPC8-211ENST00000582539 SMIM11BQ8TCY0 68 aa6.9□□□□□ -1.3
TRAPPC8-211ENST00000582539 Q9HAA7 133 aa6.9□□□□□ -1.3
TRAPPC8-211ENST00000582539 ESRGQ1W209 222 aa6.9□□□□□ -1.31
TRAPPC8-211ENST00000582539 Q6Q795 121 aa6.9□□□□□ -1.31
TRAPPC8-211ENST00000582539 FAM104AQ969W3 186 aa6.9□□□□□ -1.31
TRAPPC8-211ENST00000582539 RETNQ9HD89 108 aa6.9□□□□□ -1.31
TRAPPC8-211ENST00000582539 RPL18AQ02543 176 aaKnown RBP6.89□□□□□ -1.31
TRAPPC8-211ENST00000582539 LECT2O14960 151 aa6.89□□□□□ -1.31
TRAPPC8-211ENST00000582539 Q9UF83 564 aa6.88□□□□□ -1.31
TRAPPC8-211ENST00000582539 ITPR3Q14573 2671 aa6.88□□□□□ -1.31
TRAPPC8-211ENST00000582539 KMT2BQ9UMN6 2715 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC8-211ENST00000582539 K7EIL1 84 aa6.88□□□□□ -1.31
TRAPPC8-211ENST00000582539 WFDC10BQ8IUB3 73 aa6.88□□□□□ -1.31
TRAPPC8-211ENST00000582539 POLQO75417 2590 aa6.88□□□□□ -1.31
TRAPPC8-211ENST00000582539 ENHOQ6UWT2 76 aa6.88□□□□□ -1.31
TRAPPC8-211ENST00000582539 KIAA0087Q14695 138 aa6.87□□□□□ -1.31
TRAPPC8-211ENST00000582539 SMIM20Q8N5G0 67 aa6.87□□□□□ -1.31
TRAPPC8-211ENST00000582539 CLEC2BQ92478 149 aa6.87□□□□□ -1.31
TRAPPC8-211ENST00000582539 FLNAP21333 2647 aaKnown RBP6.87□□□□□ -1.31
TRAPPC8-211ENST00000582539 TLN2Q9Y4G6 2542 aa6.87□□□□□ -1.31
TRAPPC8-211ENST00000582539 RBM3P98179 157 aaKnown RBP6.87□□□□□ -1.31
TRAPPC8-211ENST00000582539 PRO0461Q9UI25 63 aa6.87□□□□□ -1.31
TRAPPC8-211ENST00000582539 RPL37AP8A6NKH3 93 aa6.86□□□□□ -1.31
TRAPPC8-211ENST00000582539 NCR3O14931 201 aa6.86□□□□□ -1.31
TRAPPC8-211ENST00000582539 UNQ6190/PRO20217Q6UXQ8 127 aa6.86□□□□□ -1.31
TRAPPC8-211ENST00000582539 ZNF73O43830 326 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC8-211ENST00000582539 GAGE2AQ6NT46 116 aa6.86□□□□□ -1.31
TRAPPC8-211ENST00000582539 KRTAP21-3Q3LHN1 58 aa6.85□□□□□ -1.31
TRAPPC8-211ENST00000582539 FUSP35637 526 aaKnown RBP eCLIP6.85□□□□□ -1.31
TRAPPC8-211ENST00000582539 HIGD2BQ4VC39 106 aa6.85□□□□□ -1.31
TRAPPC8-211ENST00000582539 Q8N814 137 aa6.85□□□□□ -1.31
TRAPPC8-211ENST00000582539 NOTCH2Q04721 2471 aa6.85□□□□□ -1.31
TRAPPC8-211ENST00000582539 USP17L23D6RBM5 183 aa6.85□□□□□ -1.31
TRAPPC8-211ENST00000582539 ZNF706Q9Y5V0 76 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC8-211ENST00000582539 PCP4P48539 62 aa6.84□□□□□ -1.31
TRAPPC8-211ENST00000582539 C6orf99Q4VX62 202 aa6.84□□□□□ -1.31
TRAPPC8-211ENST00000582539 C2CD3Q4AC94 2353 aa6.84□□□□□ -1.32
TRAPPC8-211ENST00000582539 FASNP49327 2511 aaKnown RBP6.83□□□□□ -1.32
TRAPPC8-211ENST00000582539 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
TRAPPC8-211ENST00000582539 LINC00575Q6W349 94 aa6.83□□□□□ -1.32
TRAPPC8-211ENST00000582539 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
TRAPPC8-211ENST00000582539 HELZ2Q9BYK8 2649 aaKnown RBP6.83□□□□□ -1.32
TRAPPC8-211ENST00000582539 LINC00337Q8N6G1 96 aa6.83□□□□□ -1.32
TRAPPC8-211ENST00000582539 SOSTDC1Q6X4U4 206 aa6.82□□□□□ -1.32
TRAPPC8-211ENST00000582539 UNC79Q9P2D8 2635 aa6.82□□□□□ -1.32
TRAPPC8-211ENST00000582539 B5MCH6 92 aa6.82□□□□□ -1.32
TRAPPC8-211ENST00000582539 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
TRAPPC8-211ENST00000582539 IGLV6-57P01721 117 aa6.82□□□□□ -1.32
TRAPPC8-211ENST00000582539 C6orf48Q9UBA6 75 aa6.82□□□□□ -1.32
TRAPPC8-211ENST00000582539 COL6A3P12111 3177 aa6.81□□□□□ -1.32
TRAPPC8-211ENST00000582539 DSPP15924 2871 aaKnown RBP6.81□□□□□ -1.32
TRAPPC8-211ENST00000582539 UBE2BP63146 152 aa6.8□□□□□ -1.32
TRAPPC8-211ENST00000582539 LINC00167Q96N53 147 aa6.8□□□□□ -1.32
TRAPPC8-211ENST00000582539 CFAP54Q96N23 3096 aa6.8□□□□□ -1.32
TRAPPC8-211ENST00000582539 Q6JHZ5 121 aa6.8□□□□□ -1.32
TRAPPC8-211ENST00000582539 Q6ZRU5 148 aa6.8□□□□□ -1.32
TRAPPC8-211ENST00000582539 TRBV10-3A0A0K0K1G6 114 aa6.79□□□□□ -1.32
TRAPPC8-211ENST00000582539 ATOX1O00244 68 aa6.79□□□□□ -1.32
TRAPPC8-211ENST00000582539 ANAPC13Q9BS18 74 aa6.79□□□□□ -1.32
TRAPPC8-211ENST00000582539 CCKP06307 115 aa6.79□□□□□ -1.32
TRAPPC8-211ENST00000582539 BCE1O60756 84 aa6.78□□□□□ -1.32
TRAPPC8-211ENST00000582539 CNBPP62633 177 aaKnown RBP6.78□□□□□ -1.32
TRAPPC8-211ENST00000582539 HRNRQ86YZ3 2850 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC8-211ENST00000582539 ELOF1P60002 83 aaKnown RBP6.78□□□□□ -1.32
TRAPPC8-211ENST00000582539 IGKV2-28A0A075B6P5 120 aa6.78□□□□□ -1.32
TRAPPC8-211ENST00000582539 IGKV2D-28P01615 120 aa6.78□□□□□ -1.32
TRAPPC8-211ENST00000582539 CFAP46Q8IYW2 2715 aa6.77□□□□□ -1.33
TRAPPC8-211ENST00000582539 LOC110117498A0A087WWA1 95 aa6.77□□□□□ -1.33
TRAPPC8-211ENST00000582539 NBDYA0A0U1RRE5 68 aa6.77□□□□□ -1.33
TRAPPC8-211ENST00000582539 C16orf90A8MZG2 172 aa6.77□□□□□ -1.33
TRAPPC8-211ENST00000582539 FN1P02751 2386 aaKnown RBP6.77□□□□□ -1.33
TRAPPC8-211ENST00000582539 ACANP16112 2415 aa6.77□□□□□ -1.33
TRAPPC8-211ENST00000582539 DMXL1Q9Y485 3027 aa6.77□□□□□ -1.33
TRAPPC8-211ENST00000582539 ITPR1Q14643 2758 aa6.76□□□□□ -1.33
TRAPPC8-211ENST00000582539 F8P00451 2351 aa6.76□□□□□ -1.33
TRAPPC8-211ENST00000582539 NOTCH3Q9UM47 2321 aa6.76□□□□□ -1.33
TRAPPC8-211ENST00000582539 VPREB1P12018 145 aa6.76□□□□□ -1.33
TRAPPC8-211ENST00000582539 MTORP42345 2549 aa6.76□□□□□ -1.33
TRAPPC8-211ENST00000582539 APLNQ9ULZ1 77 aa6.76□□□□□ -1.33
TRAPPC8-211ENST00000582539 MRPL55Q7Z7F7 128 aaKnown RBP6.76□□□□□ -1.33
TRAPPC8-211ENST00000582539 C15orf56Q8N910 161 aa6.76□□□□□ -1.33
TRAPPC8-211ENST00000582539 VPS13AQ96RL7 3174 aa6.75□□□□□ -1.33
TRAPPC8-211ENST00000582539 TEX49A0A1B0GTD5 131 aa6.75□□□□□ -1.33
TRAPPC8-211ENST00000582539 KCNQ1DNQ9H478 68 aa6.75□□□□□ -1.33
TRAPPC8-211ENST00000582539 XAGE1AQ9HD64 81 aa6.75□□□□□ -1.33
TRAPPC8-211ENST00000582539 REG3GQ6UW15 175 aa6.75□□□□□ -1.33
TRAPPC8-211ENST00000582539 UBE2AP49459 152 aa6.74□□□□□ -1.33
TRAPPC8-211ENST00000582539 C3orf84H3BNL1 204 aa6.74□□□□□ -1.33
TRAPPC8-211ENST00000582539 C6orf223Q8N319 242 aa6.74□□□□□ -1.33
TRAPPC8-211ENST00000582539 SMCPP49901 116 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC8-211ENST00000582539 NDUFV3P56181 108 aaKnown RBP6.73□□□□□ -1.33
TRAPPC8-211ENST00000582539 Q6ZQY7 126 aa6.73□□□□□ -1.33
TRAPPC8-211ENST00000582539 WDFY4Q6ZS81 3184 aa6.73□□□□□ -1.33
TRAPPC8-211ENST00000582539 TRBV7-7A0A0K0K1E9 115 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms