RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 NRACQ8N912 160 aa3.48□□□□□ -1.85
TVP23B-210ENST00000582288 OCC1Q8TAD7 63 aa3.48□□□□□ -1.85
TVP23B-210ENST00000582288 LINC00167Q96N53 147 aa3.48□□□□□ -1.85
TVP23B-210ENST00000582288 C20orf78Q9BR46 151 aa3.48□□□□□ -1.85
TVP23B-210ENST00000582288 XAGE1AQ9HD64 81 aa3.48□□□□□ -1.85
TVP23B-210ENST00000582288 LINC00862A6NCI5 91 aa3.47□□□□□ -1.85
TVP23B-210ENST00000582288 RPL37AP8A6NKH3 93 aa3.47□□□□□ -1.85
TVP23B-210ENST00000582288 K7EN84 100 aa3.47□□□□□ -1.85
TVP23B-210ENST00000582288 SPINK1P00995 79 aa3.47□□□□□ -1.85
TVP23B-210ENST00000582288 PRSS2P07478 247 aa3.47□□□□□ -1.85
TVP23B-210ENST00000582288 TAGLN2P37802 199 aaKnown RBP3.47□□□□□ -1.85
TVP23B-210ENST00000582288 CKS1BP61024 79 aa3.47□□□□□ -1.85
TVP23B-210ENST00000582288 RPS29P62273 56 aaKnown RBP3.47□□□□□ -1.85
TVP23B-210ENST00000582288 AMN1Q8IY45 258 aa3.47□□□□□ -1.85
TVP23B-210ENST00000582288 Q8IZM0 81 aa3.47□□□□□ -1.85
TVP23B-210ENST00000582288 DAND5Q8N907 189 aa3.47□□□□□ -1.85
TVP23B-210ENST00000582288 GNB1LQ9BYB4 327 aa3.47□□□□□ -1.85
TVP23B-210ENST00000582288 NDUFA12Q9UI09 145 aa3.47□□□□□ -1.85
TVP23B-210ENST00000582288 F8VRH5 84 aa3.46□□□□□ -1.86
TVP23B-210ENST00000582288 GATCO43716 136 aaKnown RBP3.46□□□□□ -1.86
TVP23B-210ENST00000582288 RPL39P62891 51 aaKnown RBP3.46□□□□□ -1.86
TVP23B-210ENST00000582288 PNRC1Q12796 327 aaPredicted RBP3.46□□□□□ -1.86
TVP23B-210ENST00000582288 C6orf226Q5I0X4 101 aa3.46□□□□□ -1.86
TVP23B-210ENST00000582288 Q6ZN92 141 aa3.46□□□□□ -1.86
TVP23B-210ENST00000582288 FAM19A2Q8N3H0 131 aa3.46□□□□□ -1.86
TVP23B-210ENST00000582288 LINC00469Q8N7U9 141 aa3.46□□□□□ -1.86
TVP23B-210ENST00000582288 PLEKHB2Q96CS7 222 aa3.46□□□□□ -1.86
TVP23B-210ENST00000582288 PYGO1Q9Y3Y4 419 aa3.46□□□□□ -1.86
TVP23B-210ENST00000582288 HIGD1CA8MV81 97 aa3.45□□□□□ -1.86
TVP23B-210ENST00000582288 IFI27P40305 119 aaPredicted RBP3.45□□□□□ -1.86
TVP23B-210ENST00000582288 CXCL5P42830 114 aa3.45□□□□□ -1.86
TVP23B-210ENST00000582288 C3orf22Q8N5N4 141 aa3.45□□□□□ -1.86
TVP23B-210ENST00000582288 KANTRA0A1W2PQU2 76 aa3.44□□□□□ -1.86
TVP23B-210ENST00000582288 HMSDA8MTL9 139 aa3.44□□□□□ -1.86
TVP23B-210ENST00000582288 SMKR1H3BMG3 65 aa3.44□□□□□ -1.86
TVP23B-210ENST00000582288 RIGQ13278 110 aa3.44□□□□□ -1.86
TVP23B-210ENST00000582288 FAM19A3Q7Z5A8 133 aa3.44□□□□□ -1.86
TVP23B-210ENST00000582288 TMEM141Q96I45 108 aa3.44□□□□□ -1.86
TVP23B-210ENST00000582288 ALKBH7Q9BT30 221 aaPredicted RBP3.44□□□□□ -1.86
TVP23B-210ENST00000582288 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
TVP23B-210ENST00000582288 SSPOA2VEC9 5147 aa3.44□□□□□ -1.86
TVP23B-210ENST00000582288 USH2AO75445 5202 aa3.43□□□□□ -1.86
TVP23B-210ENST00000582288 IGLV4-3A0A075B6K6 122 aa3.43□□□□□ -1.86
TVP23B-210ENST00000582288 M0R2T5 61 aa3.43□□□□□ -1.86
TVP23B-210ENST00000582288 NPSP0C0P6 89 aa3.43□□□□□ -1.86
TVP23B-210ENST00000582288 FAM104BQ5XKR9 115 aa3.43□□□□□ -1.86
TVP23B-210ENST00000582288 TEX43Q6ZNM6 134 aa3.43□□□□□ -1.86
TVP23B-210ENST00000582288 NKAPP1Q8N9T2 125 aa3.43□□□□□ -1.86
TVP23B-210ENST00000582288 C2orf88Q9BSF0 95 aa3.43□□□□□ -1.86
TVP23B-210ENST00000582288 SMIM2Q9BVW6 85 aa3.43□□□□□ -1.86
TVP23B-210ENST00000582288 TMEM126AQ9H061 195 aa3.43□□□□□ -1.86
TVP23B-210ENST00000582288 GEMIN7Q9H840 131 aaKnown RBP3.43□□□□□ -1.86
TVP23B-210ENST00000582288 GAGE10A6NGK3 116 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 TMEM250H0YL14 139 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 SLC25A20O43772 301 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 CKS2P33552 79 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 SEC11AP67812 179 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 PRLHP81277 87 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 MRPL51Q4U2R6 128 aaKnown RBP3.42□□□□□ -1.86
TVP23B-210ENST00000582288 FAM19A1Q7Z5A9 133 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 CBLN2Q8IUK8 224 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 Q8N377 158 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 Q8NBF4 154 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 SPRR4Q96PI1 79 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 EIF5A2Q9GZV4 153 aaKnown RBP3.42□□□□□ -1.86
TVP23B-210ENST00000582288 TOMM7Q9P0U1 55 aa3.42□□□□□ -1.86
TVP23B-210ENST00000582288 ZNF706Q9Y5V0 76 aaPredicted RBP3.42□□□□□ -1.86
TVP23B-210ENST00000582288 IGKV2-28A0A075B6P5 120 aa3.41□□□□□ -1.86
TVP23B-210ENST00000582288 A0A1B0GW15 77 aa3.41□□□□□ -1.86
TVP23B-210ENST00000582288 C9orf118A6NHY6 69 aa3.41□□□□□ -1.86
TVP23B-210ENST00000582288 IGKV2D-28P01615 120 aa3.41□□□□□ -1.86
TVP23B-210ENST00000582288 RAB5AP20339 215 aa3.41□□□□□ -1.86
TVP23B-210ENST00000582288 AMELXQ99217 191 aa3.41□□□□□ -1.86
TVP23B-210ENST00000582288 OSTCQ9NRP0 149 aa3.41□□□□□ -1.86
TVP23B-210ENST00000582288 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.86
TVP23B-210ENST00000582288 FLGP20930 4061 aaPredicted RBP3.4□□□□□ -1.86
TVP23B-210ENST00000582288 IGLV8-61A0A075B6I0 122 aa3.4□□□□□ -1.87
TVP23B-210ENST00000582288 M0R378 163 aa3.4□□□□□ -1.87
TVP23B-210ENST00000582288 PPBPP02775 128 aa3.4□□□□□ -1.87
TVP23B-210ENST00000582288 HERVK_113P63121 156 aa3.4□□□□□ -1.87
TVP23B-210ENST00000582288 ANKRD39Q53RE8 183 aa3.4□□□□□ -1.87
TVP23B-210ENST00000582288 LINC01551Q86U37 167 aa3.4□□□□□ -1.87
TVP23B-210ENST00000582288 VCX2Q9H322 139 aa3.4□□□□□ -1.87
TVP23B-210ENST00000582288 NAT8BQ9UHF3 227 aa3.4□□□□□ -1.87
TVP23B-210ENST00000582288 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
TVP23B-210ENST00000582288 PCOTHQ58A44 107 aa3.39□□□□□ -1.87
TVP23B-210ENST00000582288 C2orf66Q6UXQ4 117 aa3.39□□□□□ -1.87
TVP23B-210ENST00000582288 CDKN2A-AS1Q9UH64 79 aa3.39□□□□□ -1.87
TVP23B-210ENST00000582288 PRSS47A8MTI9 375 aa3.38□□□□□ -1.87
TVP23B-210ENST00000582288 TMEM238C9JI98 176 aa3.38□□□□□ -1.87
TVP23B-210ENST00000582288 D6R8Y8 96 aa3.38□□□□□ -1.87
TVP23B-210ENST00000582288 F8W036 122 aa3.38□□□□□ -1.87
TVP23B-210ENST00000582288 S100A8P05109 93 aa3.38□□□□□ -1.87
TVP23B-210ENST00000582288 CFC1P0CG37 223 aa3.38□□□□□ -1.87
TVP23B-210ENST00000582288 RPL24P83731 157 aaKnown RBP3.38□□□□□ -1.87
TVP23B-210ENST00000582288 FAM74A3Q4VXF1 159 aa3.38□□□□□ -1.87
TVP23B-210ENST00000582288 LINC00483Q53H64 154 aa3.38□□□□□ -1.87
TVP23B-210ENST00000582288 PDZD11Q5EBL8 140 aa3.38□□□□□ -1.87
TVP23B-210ENST00000582288 PAPPA-AS1Q5QFB9 102 aa3.38□□□□□ -1.87
TVP23B-210ENST00000582288 SSBP3-AS1Q7Z2R9 100 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms