RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 SMDT1Q9H4I9 107 aa4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 C6orf48Q9UBA6 75 aa4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 BORCS7-ASMTA0A0B4J1R7 106 aa4.3□□□□□ -1.72
SMARCE1-217ENST00000580654 SMKR1H3BMG3 65 aa4.3□□□□□ -1.72
SMARCE1-217ENST00000580654 NUPR1O60356 82 aa4.3□□□□□ -1.72
SMARCE1-217ENST00000580654 AKR1C8PQ5T2L2 129 aa4.3□□□□□ -1.72
SMARCE1-217ENST00000580654 TMEM101Q96IK0 257 aa4.3□□□□□ -1.72
SMARCE1-217ENST00000580654 IMMP2LQ96T52 175 aa4.3□□□□□ -1.72
SMARCE1-217ENST00000580654 TCEAL7Q9BRU2 100 aa4.3□□□□□ -1.72
SMARCE1-217ENST00000580654 FLGP20930 4061 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1-217ENST00000580654 TGIF2-C20orf24A0A0A6YYL0 155 aa4.29□□□□□ -1.72
SMARCE1-217ENST00000580654 A0A1B0GV90 55 aa4.29□□□□□ -1.72
SMARCE1-217ENST00000580654 A6NDN8 102 aa4.29□□□□□ -1.72
SMARCE1-217ENST00000580654 DEFA1P59665 94 aa4.29□□□□□ -1.72
SMARCE1-217ENST00000580654 IFITM3Q01628 133 aa4.29□□□□□ -1.72
SMARCE1-217ENST00000580654 C4orf26Q17RF5 130 aa4.29□□□□□ -1.72
SMARCE1-217ENST00000580654 RPL7L1Q6DKI1 246 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-217ENST00000580654 UNQ6190/PRO20217Q6UXQ8 127 aa4.29□□□□□ -1.72
SMARCE1-217ENST00000580654 FP248Q71RG6 208 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1-217ENST00000580654 OR13C6PQ8NH95 151 aa4.29□□□□□ -1.72
SMARCE1-217ENST00000580654 MAP1LC3B2A6NCE7 125 aa4.28□□□□□ -1.72
SMARCE1-217ENST00000580654 C1orf196B1AJZ1 125 aa4.28□□□□□ -1.72
SMARCE1-217ENST00000580654 PDE6DO43924 150 aa4.28□□□□□ -1.72
SMARCE1-217ENST00000580654 FAM229BQ4G0N7 80 aa4.28□□□□□ -1.72
SMARCE1-217ENST00000580654 LINC00299Q6ZSB3 139 aa4.28□□□□□ -1.72
SMARCE1-217ENST00000580654 FAM231DQ6ZW35 169 aa4.28□□□□□ -1.72
SMARCE1-217ENST00000580654 BAGE2Q86Y30 109 aa4.28□□□□□ -1.72
SMARCE1-217ENST00000580654 SMIM20Q8N5G0 67 aa4.28□□□□□ -1.72
SMARCE1-217ENST00000580654 OR10D4PQ8NGN7 298 aa4.28□□□□□ -1.72
SMARCE1-217ENST00000580654 MAP1LC3BQ9GZQ8 125 aa4.28□□□□□ -1.72
SMARCE1-217ENST00000580654 SDHAF1A6NFY7 115 aa4.27□□□□□ -1.73
SMARCE1-217ENST00000580654 NDUFA1O15239 70 aa4.27□□□□□ -1.73
SMARCE1-217ENST00000580654 BCE1O60756 84 aa4.27□□□□□ -1.73
SMARCE1-217ENST00000580654 TRGC1P0CF51 173 aa4.27□□□□□ -1.73
SMARCE1-217ENST00000580654 SMIM6P0DI80 62 aa4.27□□□□□ -1.73
SMARCE1-217ENST00000580654 CTRLP40313 264 aa4.27□□□□□ -1.73
SMARCE1-217ENST00000580654 RPL28P46779 137 aaKnown RBP4.27□□□□□ -1.73
SMARCE1-217ENST00000580654 PMVKQ15126 192 aa4.27□□□□□ -1.73
SMARCE1-217ENST00000580654 RNASE13Q5GAN3 156 aaKnown RBP4.27□□□□□ -1.73
SMARCE1-217ENST00000580654 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
SMARCE1-217ENST00000580654 COMMD7Q86VX2 200 aa4.27□□□□□ -1.73
SMARCE1-217ENST00000580654 FXYD6-FXYD2A0A087WZ82 144 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 FAM240AA0A1B0GVK7 77 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 I3L3M4 83 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 TMEM241Q24JQ0 296 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 Q5BKY6 102 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 C1orf195Q5TG92 126 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 LYZL1Q6UWQ5 148 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 KRTAP13-1Q8IUC0 172 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 CBLN2Q8IUK8 224 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 ORAOV1Q8WV07 137 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 TMEM242Q9NWH2 141 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 SPANXCQ9NY87 97 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 C22orf24Q9Y442 160 aa4.26□□□□□ -1.73
SMARCE1-217ENST00000580654 TRAV13-1A0A0B4J241 112 aa4.25□□□□□ -1.73
SMARCE1-217ENST00000580654 A0A1B0GV50 99 aa4.25□□□□□ -1.73
SMARCE1-217ENST00000580654 DLEU1O43261 78 aa4.25□□□□□ -1.73
SMARCE1-217ENST00000580654 FOXA3P55318 350 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1-217ENST00000580654 TMUB2Q71RG4 321 aa4.25□□□□□ -1.73
SMARCE1-217ENST00000580654 C3orf22Q8N5N4 141 aa4.25□□□□□ -1.73
SMARCE1-217ENST00000580654 SFT2D1Q8WV19 159 aa4.25□□□□□ -1.73
SMARCE1-217ENST00000580654 RNASE7Q9H1E1 156 aaKnown RBP4.25□□□□□ -1.73
SMARCE1-217ENST00000580654 IGKV2D-26A0A0A0MRZ7 120 aa4.24□□□□□ -1.73
SMARCE1-217ENST00000580654 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
SMARCE1-217ENST00000580654 F2Z2F3 143 aa4.24□□□□□ -1.73
SMARCE1-217ENST00000580654 KRTAP4-16G5E9R7 235 aaPredicted RBP4.24□□□□□ -1.73
SMARCE1-217ENST00000580654 M0R2T5 61 aa4.24□□□□□ -1.73
SMARCE1-217ENST00000580654 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
SMARCE1-217ENST00000580654 RPS20P60866 119 aaKnown RBP4.24□□□□□ -1.73
SMARCE1-217ENST00000580654 RAB5BP61020 215 aa4.24□□□□□ -1.73
SMARCE1-217ENST00000580654 KIAA0087Q14695 138 aa4.24□□□□□ -1.73
SMARCE1-217ENST00000580654 IGHV3OR16-9A0A0B4J2B5 98 aa4.23□□□□□ -1.73
SMARCE1-217ENST00000580654 TRBV6-5A0A0K0K1A5 114 aa4.23□□□□□ -1.73
SMARCE1-217ENST00000580654 NDUFC2-KCTD14E9PQ53 114 aa4.23□□□□□ -1.73
SMARCE1-217ENST00000580654 KCNRGQ8N5I3 272 aa4.23□□□□□ -1.73
SMARCE1-217ENST00000580654 FAM213BQ8TBF2 198 aa4.23□□□□□ -1.73
SMARCE1-217ENST00000580654 VPS25Q9BRG1 176 aa4.23□□□□□ -1.73
SMARCE1-217ENST00000580654 CYTL1Q9NRR1 136 aa4.23□□□□□ -1.73
SMARCE1-217ENST00000580654 UBE2D4Q9Y2X8 147 aa4.23□□□□□ -1.73
SMARCE1-217ENST00000580654 C7orf77A4D0Y5 90 aa4.22□□□□□ -1.73
SMARCE1-217ENST00000580654 S100A8P05109 93 aa4.22□□□□□ -1.73
SMARCE1-217ENST00000580654 RPL35P42766 123 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-217ENST00000580654 SMAGPQ0VAQ4 97 aa4.22□□□□□ -1.73
SMARCE1-217ENST00000580654 TWIST1Q15672 202 aa4.22□□□□□ -1.73
SMARCE1-217ENST00000580654 C2orf82Q6UX34 121 aa4.22□□□□□ -1.73
SMARCE1-217ENST00000580654 Q6ZUT4 128 aa4.22□□□□□ -1.73
SMARCE1-217ENST00000580654 C9orf62Q8N4C0 152 aa4.22□□□□□ -1.73
SMARCE1-217ENST00000580654 FAM104AQ969W3 186 aa4.22□□□□□ -1.73
SMARCE1-217ENST00000580654 CNFNQ9BYD5 112 aa4.22□□□□□ -1.73
SMARCE1-217ENST00000580654 IGLV9-49A0A0B4J1Y8 123 aa4.21□□□□□ -1.74
SMARCE1-217ENST00000580654 TRBV30A0A0K0K1B3 111 aa4.21□□□□□ -1.74
SMARCE1-217ENST00000580654 POLR2KP53803 58 aaKnown RBP4.21□□□□□ -1.74
SMARCE1-217ENST00000580654 IFITM2Q01629 132 aa4.21□□□□□ -1.74
SMARCE1-217ENST00000580654 SPAG11AQ6PDA7 123 aa4.21□□□□□ -1.74
SMARCE1-217ENST00000580654 MRPL55Q7Z7F7 128 aaKnown RBP4.21□□□□□ -1.74
SMARCE1-217ENST00000580654 MBD3L1Q8WWY6 194 aa4.21□□□□□ -1.74
SMARCE1-217ENST00000580654 BORCS7Q96B45 105 aa4.21□□□□□ -1.74
SMARCE1-217ENST00000580654 A0A1B0GWB2 263 aa4.2□□□□□ -1.74
SMARCE1-217ENST00000580654 RPL37AP8A6NKH3 93 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms