RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 TLX1NBP0CAT3 122 aa10.34□□□□□ -0.75
SREBF1-219ENST00000580540 PHF5AQ7RTV0 110 aaKnown RBP10.34□□□□□ -0.75
SREBF1-219ENST00000580540 FAM168BA1KXE4 195 aa10.33□□□□□ -0.76
SREBF1-219ENST00000580540 CST9LQ9H4G1 147 aa10.33□□□□□ -0.76
SREBF1-219ENST00000580540 NDUFA6P56556 154 aa10.32□□□□□ -0.76
SREBF1-219ENST00000580540 FAM19A5Q7Z5A7 132 aaPredicted RBP10.32□□□□□ -0.76
SREBF1-219ENST00000580540 Q8IZM0 81 aa10.32□□□□□ -0.76
SREBF1-219ENST00000580540 C18orf32Q8TCD1 76 aa10.32□□□□□ -0.76
SREBF1-219ENST00000580540 TINCRA0A1B0GVN0 87 aa10.31□□□□□ -0.76
SREBF1-219ENST00000580540 LINC00614P0C842 121 aa10.31□□□□□ -0.76
SREBF1-219ENST00000580540 PMVKQ15126 192 aa10.31□□□□□ -0.76
SREBF1-219ENST00000580540 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
SREBF1-219ENST00000580540 PMCHL1Q16048 86 aa10.29□□□□□ -0.76
SREBF1-219ENST00000580540 URB1-AS1Q96HZ7 61 aa10.29□□□□□ -0.76
SREBF1-219ENST00000580540 PSORS1C2Q9UIG4 136 aa10.29□□□□□ -0.76
SREBF1-219ENST00000580540 C1orf137Q5JT78 98 aa10.28□□□□□ -0.76
SREBF1-219ENST00000580540 SPINK6Q6UWN8 80 aa10.28□□□□□ -0.76
SREBF1-219ENST00000580540 SMIM1B2RUZ4 78 aa10.27□□□□□ -0.77
SREBF1-219ENST00000580540 HBDP02042 147 aa10.27□□□□□ -0.77
SREBF1-219ENST00000580540 SPINK8P0C7L1 97 aa10.27□□□□□ -0.77
SREBF1-219ENST00000580540 RAB5BP61020 215 aa10.27□□□□□ -0.77
SREBF1-219ENST00000580540 A0A096LNJ9 63 aa10.26□□□□□ -0.77
SREBF1-219ENST00000580540 F8VRH5 84 aa10.26□□□□□ -0.77
SREBF1-219ENST00000580540 PDZD11Q5EBL8 140 aa10.26□□□□□ -0.77
SREBF1-219ENST00000580540 C9orf129Q5T035 196 aaKnown RBP10.26□□□□□ -0.77
SREBF1-219ENST00000580540 SERTAD4-AS1Q5TG53 156 aa10.26□□□□□ -0.77
SREBF1-219ENST00000580540 COX7B2Q8TF08 81 aa10.26□□□□□ -0.77
SREBF1-219ENST00000580540 IGLV5-45A0A087WSX0 123 aa10.25□□□□□ -0.77
SREBF1-219ENST00000580540 H3BRM9 83 aa10.25□□□□□ -0.77
SREBF1-219ENST00000580540 M0QXV9 152 aa10.25□□□□□ -0.77
SREBF1-219ENST00000580540 MT1HL1P0DM35 61 aa10.25□□□□□ -0.77
SREBF1-219ENST00000580540 CXCL5P42830 114 aa10.25□□□□□ -0.77
SREBF1-219ENST00000580540 SRSF9Q13242 221 aaKnown RBP eCLIP10.25□□□□□ -0.77
SREBF1-219ENST00000580540 UBE2BP63146 152 aa10.24□□□□□ -0.77
SREBF1-219ENST00000580540 REG3GQ6UW15 175 aa10.24□□□□□ -0.77
SREBF1-219ENST00000580540 KRTAP7-1Q8IUC3 87 aa10.24□□□□□ -0.77
SREBF1-219ENST00000580540 YPEL4Q96NS1 127 aa10.24□□□□□ -0.77
SREBF1-219ENST00000580540 XAGE1AQ9HD64 81 aa10.24□□□□□ -0.77
SREBF1-219ENST00000580540 CBLN2Q8IUK8 224 aa10.23□□□□□ -0.77
SREBF1-219ENST00000580540 ATP5LO75964 103 aa10.22□□□□□ -0.77
SREBF1-219ENST00000580540 IGLC3P0DOY3 106 aa10.22□□□□□ -0.77
SREBF1-219ENST00000580540 BAGE3Q86Y29 109 aa10.22□□□□□ -0.77
SREBF1-219ENST00000580540 KRTAP11-1Q8IUC1 163 aa10.22□□□□□ -0.77
SREBF1-219ENST00000580540 SLC7A5P1Q8MH63 180 aa10.22□□□□□ -0.77
SREBF1-219ENST00000580540 LINC01600Q96MT4 127 aa10.21□□□□□ -0.77
SREBF1-219ENST00000580540 IGLV7-43P04211 117 aa10.19□□□□□ -0.78
SREBF1-219ENST00000580540 ZNF22P17026 224 aaPredicted RBP10.19□□□□□ -0.78
SREBF1-219ENST00000580540 CHCHD1Q96BP2 118 aaKnown RBP10.18□□□□□ -0.78
SREBF1-219ENST00000580540 PLA2G2DQ9UNK4 145 aa10.18□□□□□ -0.78
SREBF1-219ENST00000580540 C22orf24Q9Y442 160 aa10.18□□□□□ -0.78
SREBF1-219ENST00000580540 TNXBP22105 4242 aa10.18□□□□□ -0.78
SREBF1-219ENST00000580540 TMEM170BQ5T4T1 132 aa10.17□□□□□ -0.78
SREBF1-219ENST00000580540 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
SREBF1-219ENST00000580540 CHTOPQ9Y3Y2 248 aaKnown RBP10.16□□□□□ -0.78
SREBF1-219ENST00000580540 HMCN2Q8NDA2 5059 aa10.15□□□□□ -0.78
SREBF1-219ENST00000580540 IGLV5-39A0A0G2JS06 123 aa10.15□□□□□ -0.78
SREBF1-219ENST00000580540 TRGC2P03986 189 aa10.15□□□□□ -0.78
SREBF1-219ENST00000580540 LBHQ53QV2 105 aaPredicted RBP10.15□□□□□ -0.78
SREBF1-219ENST00000580540 DIRC1Q969H9 104 aa10.15□□□□□ -0.78
SREBF1-219ENST00000580540 HSBP1O75506 76 aa10.14□□□□□ -0.79
SREBF1-219ENST00000580540 PFN2P35080 140 aa10.14□□□□□ -0.79
SREBF1-219ENST00000580540 IFI27L1Q96BM0 104 aa10.14□□□□□ -0.79
SREBF1-219ENST00000580540 ODF1Q14990 250 aa10.13□□□□□ -0.79
SREBF1-219ENST00000580540 FAM19A2Q8N3H0 131 aa10.13□□□□□ -0.79
SREBF1-219ENST00000580540 MRPL55Q7Z7F7 128 aaKnown RBP10.12□□□□□ -0.79
SREBF1-219ENST00000580540 ZNF625Q96I27 306 aaPredicted RBP10.12□□□□□ -0.79
SREBF1-219ENST00000580540 KRTAP10-8P60410 259 aa10.11□□□□□ -0.79
SREBF1-219ENST00000580540 GAGE10A6NGK3 116 aa10.1□□□□□ -0.79
SREBF1-219ENST00000580540 H0Y8G0 127 aa10.1□□□□□ -0.79
SREBF1-219ENST00000580540 H0Y9J4 135 aa10.1□□□□□ -0.79
SREBF1-219ENST00000580540 TRAV12-1A0A0B4J245 112 aa10.09□□□□□ -0.79
SREBF1-219ENST00000580540 RPL37AP8A6NKH3 93 aa10.09□□□□□ -0.79
SREBF1-219ENST00000580540 NKAPP1Q8N9T2 125 aa10.09□□□□□ -0.79
SREBF1-219ENST00000580540 LINC00167Q96N53 147 aa10.09□□□□□ -0.79
SREBF1-219ENST00000580540 TP73-AS1Q9UF72 201 aa10.09□□□□□ -0.79
SREBF1-219ENST00000580540 ERG28Q9UKR5 140 aa10.09□□□□□ -0.79
SREBF1-219ENST00000580540 NUPR1O60356 82 aa10.07□□□□□ -0.8
SREBF1-219ENST00000580540 SERF1AO75920 110 aa10.07□□□□□ -0.8
SREBF1-219ENST00000580540 TMEM223A0PJW6 202 aa10.06□□□□□ -0.8
SREBF1-219ENST00000580540 COLCA2A8K830 154 aa10.06□□□□□ -0.8
SREBF1-219ENST00000580540 LEPROTL1O95214 131 aa10.06□□□□□ -0.8
SREBF1-219ENST00000580540 PRR26Q8N8Z3 221 aa10.06□□□□□ -0.8
SREBF1-219ENST00000580540 ZNF861PO60384 105 aa10.05□□□□□ -0.8
SREBF1-219ENST00000580540 SCO1O75880 301 aa10.05□□□□□ -0.8
SREBF1-219ENST00000580540 SFTA2Q6UW10 78 aa10.05□□□□□ -0.8
SREBF1-219ENST00000580540 SND1-IT1Q9HBX3 110 aa10.05□□□□□ -0.8
SREBF1-219ENST00000580540 A0A0U1RRA0 63 aa10.04□□□□□ -0.8
SREBF1-219ENST00000580540 FABP4P15090 132 aa10.04□□□□□ -0.8
SREBF1-219ENST00000580540 LINC00158P58513 81 aa10.04□□□□□ -0.8
SREBF1-219ENST00000580540 COX17Q14061 63 aa10.04□□□□□ -0.8
SREBF1-219ENST00000580540 IGLV5-37A0A075B6J1 123 aa10.03□□□□□ -0.8
SREBF1-219ENST00000580540 LINC00310P59036 64 aa10.03□□□□□ -0.8
SREBF1-219ENST00000580540 BCE1O60756 84 aa10.02□□□□□ -0.81
SREBF1-219ENST00000580540 IGKV2-28A0A075B6P5 120 aa10.01□□□□□ -0.81
SREBF1-219ENST00000580540 IGKV2D-28P01615 120 aa10.01□□□□□ -0.81
SREBF1-219ENST00000580540 RPL28P46779 137 aaKnown RBP10.01□□□□□ -0.81
SREBF1-219ENST00000580540 RPL24P83731 157 aaKnown RBP10.01□□□□□ -0.81
SREBF1-219ENST00000580540 HSPB8Q9UJY1 196 aa10.01□□□□□ -0.81
SREBF1-219ENST00000580540 ATP6V1G1O75348 118 aa10□□□□□ -0.81
SREBF1-219ENST00000580540 KRTAP1-4P0C5Y4 121 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms