RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 XAGE1AQ9HD64 81 aa7.06□□□□□ -1.28
CDK5RAP3-216ENST00000579853 RAB5AP20339 215 aa7.05□□□□□ -1.28
CDK5RAP3-216ENST00000579853 Q8IZM0 81 aa7.05□□□□□ -1.28
CDK5RAP3-216ENST00000579853 TMEM141Q96I45 108 aa7.05□□□□□ -1.28
CDK5RAP3-216ENST00000579853 C2orf88Q9BSF0 95 aa7.05□□□□□ -1.28
CDK5RAP3-216ENST00000579853 PPDPFQ9H3Y8 114 aa7.05□□□□□ -1.28
CDK5RAP3-216ENST00000579853 ANAPC11Q9NYG5 84 aa7.05□□□□□ -1.28
CDK5RAP3-216ENST00000579853 BLOC1S1P78537 153 aa7.04□□□□□ -1.28
CDK5RAP3-216ENST00000579853 TEX43Q6ZNM6 134 aa7.04□□□□□ -1.28
CDK5RAP3-216ENST00000579853 TOMM7Q9P0U1 55 aa7.04□□□□□ -1.28
CDK5RAP3-216ENST00000579853 V9GYV3 84 aa7.04□□□□□ -1.28
CDK5RAP3-216ENST00000579853 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
CDK5RAP3-216ENST00000579853 D6R8Y8 96 aa7.03□□□□□ -1.28
CDK5RAP3-216ENST00000579853 PPBPP02775 128 aa7.03□□□□□ -1.28
CDK5RAP3-216ENST00000579853 UBE2AP49459 152 aa7.03□□□□□ -1.28
CDK5RAP3-216ENST00000579853 LINC00167Q96N53 147 aa7.03□□□□□ -1.28
CDK5RAP3-216ENST00000579853 ALKBH7Q9BT30 221 aaPredicted RBP7.03□□□□□ -1.28
CDK5RAP3-216ENST00000579853 F8VRH5 84 aa7.02□□□□□ -1.29
CDK5RAP3-216ENST00000579853 F8W036 122 aa7.02□□□□□ -1.29
CDK5RAP3-216ENST00000579853 S100A8P05109 93 aa7.02□□□□□ -1.29
CDK5RAP3-216ENST00000579853 FAM74A3Q4VXF1 159 aa7.02□□□□□ -1.29
CDK5RAP3-216ENST00000579853 FP248Q71RG6 208 aaPredicted RBP7.02□□□□□ -1.29
CDK5RAP3-216ENST00000579853 LINC00337Q8N6G1 96 aa7.02□□□□□ -1.29
CDK5RAP3-216ENST00000579853 RPL37AP8A6NKH3 93 aa7.01□□□□□ -1.29
CDK5RAP3-216ENST00000579853 CXCL5P42830 114 aa7.01□□□□□ -1.29
CDK5RAP3-216ENST00000579853 SPAG11AQ6PDA7 123 aa7.01□□□□□ -1.29
CDK5RAP3-216ENST00000579853 KRTAP13-1Q8IUC0 172 aa7.01□□□□□ -1.29
CDK5RAP3-216ENST00000579853 EIF5A2Q9GZV4 153 aaKnown RBP7.01□□□□□ -1.29
CDK5RAP3-216ENST00000579853 NPYP01303 97 aa7□□□□□ -1.29
CDK5RAP3-216ENST00000579853 SEC11AP67812 179 aa7□□□□□ -1.29
CDK5RAP3-216ENST00000579853 ASB16-AS1Q495Z4 193 aa7□□□□□ -1.29
CDK5RAP3-216ENST00000579853 SMIM27A0A1W2PRY6 76 aa6.99□□□□□ -1.29
CDK5RAP3-216ENST00000579853 NPSP0C0P6 89 aa6.99□□□□□ -1.29
CDK5RAP3-216ENST00000579853 NKAPP1Q8N9T2 125 aa6.99□□□□□ -1.29
CDK5RAP3-216ENST00000579853 VCX2Q9H322 139 aa6.99□□□□□ -1.29
CDK5RAP3-216ENST00000579853 HERVK_113P63121 156 aa6.98□□□□□ -1.29
CDK5RAP3-216ENST00000579853 PNRC1Q12796 327 aaPredicted RBP6.98□□□□□ -1.29
CDK5RAP3-216ENST00000579853 FAM19A3Q7Z5A8 133 aa6.98□□□□□ -1.29
CDK5RAP3-216ENST00000579853 ORMDL3Q8N138 153 aa6.98□□□□□ -1.29
CDK5RAP3-216ENST00000579853 IGLV5-37A0A075B6J1 123 aa6.97□□□□□ -1.29
CDK5RAP3-216ENST00000579853 GAGE10A6NGK3 116 aa6.97□□□□□ -1.29
CDK5RAP3-216ENST00000579853 H3BS24 57 aa6.97□□□□□ -1.29
CDK5RAP3-216ENST00000579853 SEC61BP60468 96 aaKnown RBP6.97□□□□□ -1.29
CDK5RAP3-216ENST00000579853 SRSF3P84103 164 aaKnown RBP6.97□□□□□ -1.29
CDK5RAP3-216ENST00000579853 AMELXQ99217 191 aa6.97□□□□□ -1.29
CDK5RAP3-216ENST00000579853 CYSLTR1Q9Y271 337 aa6.97□□□□□ -1.29
CDK5RAP3-216ENST00000579853 PAPPA-AS1Q5QFB9 102 aa6.96□□□□□ -1.3
CDK5RAP3-216ENST00000579853 C2orf66Q6UXQ4 117 aa6.96□□□□□ -1.3
CDK5RAP3-216ENST00000579853 TMEM136Q6ZRR5 245 aa6.96□□□□□ -1.3
CDK5RAP3-216ENST00000579853 SRP19P09132 144 aaKnown RBP6.95□□□□□ -1.3
CDK5RAP3-216ENST00000579853 RPL23P62829 140 aaKnown RBP6.95□□□□□ -1.3
CDK5RAP3-216ENST00000579853 PRELID3AQ96N28 172 aa6.95□□□□□ -1.3
CDK5RAP3-216ENST00000579853 LAMTOR2Q9Y2Q5 125 aa6.95□□□□□ -1.3
CDK5RAP3-216ENST00000579853 PRSS47A8MTI9 375 aa6.94□□□□□ -1.3
CDK5RAP3-216ENST00000579853 ADIRFQ15847 76 aa6.94□□□□□ -1.3
CDK5RAP3-216ENST00000579853 KRTAP13-3Q3SY46 172 aa6.94□□□□□ -1.3
CDK5RAP3-216ENST00000579853 MRPL54Q6P161 138 aaKnown RBP6.94□□□□□ -1.3
CDK5RAP3-216ENST00000579853 ALKAL2Q6UX46 152 aa6.94□□□□□ -1.3
CDK5RAP3-216ENST00000579853 GEMIN7Q9H840 131 aaKnown RBP6.94□□□□□ -1.3
CDK5RAP3-216ENST00000579853 CDKN2A-AS1Q9UH64 79 aa6.94□□□□□ -1.3
CDK5RAP3-216ENST00000579853 IGKV2-28A0A075B6P5 120 aa6.93□□□□□ -1.3
CDK5RAP3-216ENST00000579853 A0A1B0GXF2 115 aa6.93□□□□□ -1.3
CDK5RAP3-216ENST00000579853 IGKV2D-28P01615 120 aa6.93□□□□□ -1.3
CDK5RAP3-216ENST00000579853 ORMDL2Q53FV1 153 aa6.93□□□□□ -1.3
CDK5RAP3-216ENST00000579853 GNB1LQ9BYB4 327 aa6.93□□□□□ -1.3
CDK5RAP3-216ENST00000579853 K7EMI3 77 aa6.92□□□□□ -1.3
CDK5RAP3-216ENST00000579853 G0S2P27469 103 aa6.92□□□□□ -1.3
CDK5RAP3-216ENST00000579853 PRLHP81277 87 aa6.92□□□□□ -1.3
CDK5RAP3-216ENST00000579853 ZC2HC1BQ5TFG8 222 aa6.92□□□□□ -1.3
CDK5RAP3-216ENST00000579853 FAM19A1Q7Z5A9 133 aa6.92□□□□□ -1.3
CDK5RAP3-216ENST00000579853 PLEKHB2Q96CS7 222 aa6.92□□□□□ -1.3
CDK5RAP3-216ENST00000579853 MAP1LC3AQ9H492 121 aa6.92□□□□□ -1.3
CDK5RAP3-216ENST00000579853 NAT8Q9UHE5 227 aa6.92□□□□□ -1.3
CDK5RAP3-216ENST00000579853 PDZD11Q5EBL8 140 aa6.91□□□□□ -1.3
CDK5RAP3-216ENST00000579853 ATP5L2Q7Z4Y8 100 aa6.91□□□□□ -1.3
CDK5RAP3-216ENST00000579853 C3orf22Q8N5N4 141 aa6.91□□□□□ -1.3
CDK5RAP3-216ENST00000579853 COX7B2Q8TF08 81 aa6.91□□□□□ -1.3
CDK5RAP3-216ENST00000579853 TMEM126AQ9H061 195 aa6.91□□□□□ -1.3
CDK5RAP3-216ENST00000579853 LOC389332A0A1B0GUA5 103 aa6.9□□□□□ -1.3
CDK5RAP3-216ENST00000579853 IGIPA6NJ69 53 aa6.9□□□□□ -1.3
CDK5RAP3-216ENST00000579853 CBLN2Q8IUK8 224 aa6.9□□□□□ -1.3
CDK5RAP3-216ENST00000579853 Q8N8P6 123 aa6.9□□□□□ -1.3
CDK5RAP3-216ENST00000579853 SMIM1B2RUZ4 78 aa6.89□□□□□ -1.31
CDK5RAP3-216ENST00000579853 RAB5BP61020 215 aa6.89□□□□□ -1.31
CDK5RAP3-216ENST00000579853 KRTAP4-1Q9BYQ7 146 aa6.89□□□□□ -1.31
CDK5RAP3-216ENST00000579853 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
CDK5RAP3-216ENST00000579853 TIMM17AQ99595 171 aa6.88□□□□□ -1.31
CDK5RAP3-216ENST00000579853 SPINK1P00995 79 aa6.87□□□□□ -1.31
CDK5RAP3-216ENST00000579853 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
CDK5RAP3-216ENST00000579853 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
CDK5RAP3-216ENST00000579853 DAND5Q8N907 189 aa6.87□□□□□ -1.31
CDK5RAP3-216ENST00000579853 KRTAP9-9Q9BYP9 154 aa6.87□□□□□ -1.31
CDK5RAP3-216ENST00000579853 KRTAP9-4Q9BYQ2 154 aa6.87□□□□□ -1.31
CDK5RAP3-216ENST00000579853 ZNF706Q9Y5V0 76 aaPredicted RBP6.87□□□□□ -1.31
CDK5RAP3-216ENST00000579853 TINCRA0A1B0GVN0 87 aa6.86□□□□□ -1.31
CDK5RAP3-216ENST00000579853 TMEM238C9JI98 176 aa6.86□□□□□ -1.31
CDK5RAP3-216ENST00000579853 ATP5LO75964 103 aa6.86□□□□□ -1.31
CDK5RAP3-216ENST00000579853 FAM19A2Q8N3H0 131 aa6.86□□□□□ -1.31
CDK5RAP3-216ENST00000579853 HIGD2AQ9BW72 106 aa6.86□□□□□ -1.31
CDK5RAP3-216ENST00000579853 NXT2Q9NPJ8 142 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms