RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 TRAV9-1A0A075B6T8 112 aa8.4□□□□□ -1.06
GGA3-208ENST00000579743 M0QXV9 152 aa8.4□□□□□ -1.06
GGA3-208ENST00000579743 UBE2D1P51668 147 aa8.4□□□□□ -1.06
GGA3-208ENST00000579743 C6orf226Q5I0X4 101 aa8.4□□□□□ -1.06
GGA3-208ENST00000579743 KIAA0087Q14695 138 aa8.39□□□□□ -1.07
GGA3-208ENST00000579743 TOMM7Q9P0U1 55 aa8.39□□□□□ -1.07
GGA3-208ENST00000579743 FAM168BA1KXE4 195 aa8.38□□□□□ -1.07
GGA3-208ENST00000579743 HERVK_113P63121 156 aa8.38□□□□□ -1.07
GGA3-208ENST00000579743 GEMIN7Q9H840 131 aaKnown RBP8.38□□□□□ -1.07
GGA3-208ENST00000579743 H0Y9J4 135 aa8.37□□□□□ -1.07
GGA3-208ENST00000579743 C2orf82Q6UX34 121 aa8.37□□□□□ -1.07
GGA3-208ENST00000579743 ALKBH7Q9BT30 221 aaPredicted RBP8.37□□□□□ -1.07
GGA3-208ENST00000579743 LINC01549A6NIU2 74 aa8.36□□□□□ -1.07
GGA3-208ENST00000579743 Q8IZM0 81 aa8.36□□□□□ -1.07
GGA3-208ENST00000579743 AMELXQ99217 191 aa8.36□□□□□ -1.07
GGA3-208ENST00000579743 IGLV1-50A0A075B6I6 118 aa8.35□□□□□ -1.07
GGA3-208ENST00000579743 TRGC2P03986 189 aa8.35□□□□□ -1.07
GGA3-208ENST00000579743 LBHQ53QV2 105 aaPredicted RBP8.35□□□□□ -1.07
GGA3-208ENST00000579743 C5orf52A6NGY3 159 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 HIST1H2BKO60814 126 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 HIST1H2BJP06899 126 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 HIST1H2BOP23527 126 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 HIST1H2BBP33778 126 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 RPL13AP40429 203 aaKnown RBP8.34□□□□□ -1.07
GGA3-208ENST00000579743 CXCL5P42830 114 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 HIST1H2BDP58876 126 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 HIST1H2BCP62807 126 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 HIST2H2BEQ16778 126 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.34□□□□□ -1.07
GGA3-208ENST00000579743 HIST1H2BHQ93079 126 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 HIST1H2BNQ99877 126 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 HIST1H2BMQ99879 126 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 UBR4Q5T4S7 5183 aa8.34□□□□□ -1.07
GGA3-208ENST00000579743 IGIPA6NJ69 53 aa8.33□□□□□ -1.08
GGA3-208ENST00000579743 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
GGA3-208ENST00000579743 PRR26Q8N8Z3 221 aa8.33□□□□□ -1.08
GGA3-208ENST00000579743 F8VRH5 84 aa8.32□□□□□ -1.08
GGA3-208ENST00000579743 NUPR1O60356 82 aa8.32□□□□□ -1.08
GGA3-208ENST00000579743 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
GGA3-208ENST00000579743 LINC00173Q6ZV60 143 aa8.32□□□□□ -1.08
GGA3-208ENST00000579743 ERASQ7Z444 233 aa8.32□□□□□ -1.08
GGA3-208ENST00000579743 TOMM6Q96B49 74 aa8.32□□□□□ -1.08
GGA3-208ENST00000579743 S100A6P06703 90 aa8.31□□□□□ -1.08
GGA3-208ENST00000579743 ZC2HC1BQ5TFG8 222 aa8.31□□□□□ -1.08
GGA3-208ENST00000579743 SCGB3A1Q96QR1 104 aa8.31□□□□□ -1.08
GGA3-208ENST00000579743 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
GGA3-208ENST00000579743 SNRPEP62304 92 aaKnown RBP8.3□□□□□ -1.08
GGA3-208ENST00000579743 COX19Q49B96 90 aa8.3□□□□□ -1.08
GGA3-208ENST00000579743 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
GGA3-208ENST00000579743 FABP9Q0Z7S8 132 aa8.29□□□□□ -1.08
GGA3-208ENST00000579743 COA6Q5JTJ3 125 aaKnown RBP8.29□□□□□ -1.08
GGA3-208ENST00000579743 KRTAP11-1Q8IUC1 163 aa8.29□□□□□ -1.08
GGA3-208ENST00000579743 XAGE1AQ9HD64 81 aa8.29□□□□□ -1.08
GGA3-208ENST00000579743 C22orf24Q9Y442 160 aa8.29□□□□□ -1.08
GGA3-208ENST00000579743 ZNF861PO60384 105 aa8.28□□□□□ -1.08
GGA3-208ENST00000579743 KIAA1644Q3SXP7 199 aa8.28□□□□□ -1.08
GGA3-208ENST00000579743 PDZD11Q5EBL8 140 aa8.28□□□□□ -1.08
GGA3-208ENST00000579743 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
GGA3-208ENST00000579743 GNB1LQ9BYB4 327 aa8.28□□□□□ -1.08
GGA3-208ENST00000579743 TP73-AS1Q9UF72 201 aa8.28□□□□□ -1.08
GGA3-208ENST00000579743 TRAPPC1Q9Y5R8 145 aa8.28□□□□□ -1.08
GGA3-208ENST00000579743 TINCRA0A1B0GVN0 87 aa8.27□□□□□ -1.09
GGA3-208ENST00000579743 RPL28P46779 137 aaKnown RBP8.27□□□□□ -1.09
GGA3-208ENST00000579743 NDUFA6P56556 154 aa8.27□□□□□ -1.09
GGA3-208ENST00000579743 MRPL55Q7Z7F7 128 aaKnown RBP8.27□□□□□ -1.09
GGA3-208ENST00000579743 MRPL18Q9H0U6 180 aaKnown RBP8.27□□□□□ -1.09
GGA3-208ENST00000579743 H3BRM9 83 aa8.26□□□□□ -1.09
GGA3-208ENST00000579743 HIST3H2BBQ8N257 126 aa8.26□□□□□ -1.09
GGA3-208ENST00000579743 COX7B2Q8TF08 81 aa8.26□□□□□ -1.09
GGA3-208ENST00000579743 FA2HQ7L5A8 372 aa8.25□□□□□ -1.09
GGA3-208ENST00000579743 TNXBP22105 4242 aa8.25□□□□□ -1.09
GGA3-208ENST00000579743 KRTAP1-4P0C5Y4 121 aa8.24□□□□□ -1.09
GGA3-208ENST00000579743 NKAPP1Q8N9T2 125 aa8.24□□□□□ -1.09
GGA3-208ENST00000579743 SMIM1B2RUZ4 78 aa8.23□□□□□ -1.09
GGA3-208ENST00000579743 BCE1O60756 84 aa8.23□□□□□ -1.09
GGA3-208ENST00000579743 ATP5LO75964 103 aa8.23□□□□□ -1.09
GGA3-208ENST00000579743 AKR1D1P51857 326 aa8.23□□□□□ -1.09
GGA3-208ENST00000579743 PMVKQ15126 192 aa8.23□□□□□ -1.09
GGA3-208ENST00000579743 CST9LQ9H4G1 147 aa8.23□□□□□ -1.09
GGA3-208ENST00000579743 IGLV5-45A0A087WSX0 123 aa8.22□□□□□ -1.09
GGA3-208ENST00000579743 SMIM6P0DI80 62 aa8.22□□□□□ -1.09
GGA3-208ENST00000579743 PRR4Q16378 134 aa8.22□□□□□ -1.09
GGA3-208ENST00000579743 LINC01546A6NGU7 62 aa8.21□□□□□ -1.1
GGA3-208ENST00000579743 LINC00310P59036 64 aa8.21□□□□□ -1.1
GGA3-208ENST00000579743 LINC00518Q8N0U6 118 aa8.21□□□□□ -1.1
GGA3-208ENST00000579743 LRP2P98164 4655 aa8.21□□□□□ -1.1
GGA3-208ENST00000579743 SPINK8P0C7L1 97 aa8.2□□□□□ -1.1
GGA3-208ENST00000579743 CRYGAP11844 174 aa8.2□□□□□ -1.1
GGA3-208ENST00000579743 LINC00167Q96N53 147 aa8.2□□□□□ -1.1
GGA3-208ENST00000579743 HIST1H2BLQ99880 126 aa8.2□□□□□ -1.1
GGA3-208ENST00000579743 RPL37AP8A6NKH3 93 aa8.19□□□□□ -1.1
GGA3-208ENST00000579743 UBE2AP49459 152 aa8.19□□□□□ -1.1
GGA3-208ENST00000579743 S100A2P29034 98 aa8.18□□□□□ -1.1
GGA3-208ENST00000579743 GAGE10A6NGK3 116 aa8.17□□□□□ -1.1
GGA3-208ENST00000579743 SFTA2Q6UW10 78 aa8.17□□□□□ -1.1
GGA3-208ENST00000579743 TYMSOSQ8TAI1 123 aa8.17□□□□□ -1.1
GGA3-208ENST00000579743 C18orf32Q8TCD1 76 aa8.17□□□□□ -1.1
GGA3-208ENST00000579743 IGLV5-37A0A075B6J1 123 aa8.16□□□□□ -1.1
GGA3-208ENST00000579743 SERF1AO75920 110 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms