RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 GAGE5Q13069 117 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 GAGE6Q13070 117 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 ETDBQ3ZM63 59 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 CFAP126Q5VTH2 177 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 SH2D6Q7Z4S9 175 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 C14orf178Q8N769 122 aaPredicted RBP2.35□□□□□ -2.03
CDH19-204ENST00000579658 PHLDA3Q9Y5J5 127 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 IGLV4-69A0A075B6H9 119 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 TSHBP01222 138 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 C11orf72Q8NBR9 251 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 RPL39LQ96EH5 51 aaKnown RBP2.35□□□□□ -2.03
CDH19-204ENST00000579658 TMEM141Q96I45 108 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 ODF3Q96PU9 254 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 TIMM17AQ99595 171 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 PRADC1Q9BSG0 188 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 NOP10Q9NPE3 64 aaKnown RBP2.35□□□□□ -2.03
CDH19-204ENST00000579658 MDFICQ9P1T7 246 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 PRO0628Q9UI54 55 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 CYSLTR1Q9Y271 337 aa2.35□□□□□ -2.03
CDH19-204ENST00000579658 LRP1BQ9NZR2 4599 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 IGHV1OR15-1A0A075B7D0 117 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 A0A0J9YY99 117 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 TRBV6-5A0A0K0K1A5 114 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 TRBV27A0A0K0K1C4 114 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 C11orf86A6NJI1 115 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 SPART-AS1P0CW21 52 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 DEFB130BP0DP73 79 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 DEFB130AP0DP74 79 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 HTN3P15516 51 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 S100A4P26447 101 aaKnown RBP2.34□□□□□ -2.03
CDH19-204ENST00000579658 PMVKQ15126 192 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 Q6ZTI0 123 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 SLC25A29Q8N8R3 303 aa2.34□□□□□ -2.03
CDH19-204ENST00000579658 MYCBP2O75592 4640 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 TRBV20-1A0A075B6N2 111 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 ZNF815PA8K554 130 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 GAGE7O76087 117 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 IGHV3-30P01768 117 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 GAGE12FP0CL80 117 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 GAGE12GP0CL81 117 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 GAGE12IP0CL82 117 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 IGHV3-30-5P0DP03 117 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 SRSF9Q13242 221 aaKnown RBP eCLIP2.34□□□□□ -2.04
CDH19-204ENST00000579658 ZNF876PQ49A33 203 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 ZFP2Q6ZN57 461 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 NFE4Q86UQ8 179 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 PLEKHB2Q96CS7 222 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 LINC01600Q96MT4 127 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 AMELXQ99217 191 aa2.34□□□□□ -2.04
CDH19-204ENST00000579658 MRPL16Q9NX20 251 aaKnown RBP2.34□□□□□ -2.04
CDH19-204ENST00000579658 APOMO95445 188 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 IGHV3-53P01767 116 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 CFC1BP0CG36 223 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 CFC1P0CG37 223 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 CCL18P55774 89 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 SCGB1D4Q6XE38 83 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 TMEM263Q8WUH6 116 aaKnown RBP2.33□□□□□ -2.04
CDH19-204ENST00000579658 HMCN2Q8NDA2 5059 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 IGHV3-16A0A0C4DH30 117 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 SDHAF1A6NFY7 115 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 CCDC179H3BU77 68 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 LINC00694P0DN24 101 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 HERVK_113P61574 105 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 DAD1P61803 113 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 CD164Q04900 197 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 LYRM7Q5U5X0 104 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 TEN1Q86WV5 123 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 C10orf126Q8N4M7 172 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 ZNRF2Q8NHG8 242 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 C16orf74Q96GX8 76 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 TMEM101Q96IK0 257 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 C9orf85Q96MD7 179 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 JPT2Q9H910 190 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 DNAH5Q8TE73 4624 aa2.33□□□□□ -2.04
CDH19-204ENST00000579658 TRGV1A0A0A0MS02 117 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 J3QQQ9 107 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 M0QY20 66 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 TCL1BO95988 128 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 MGPP08493 103 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 SUMO4Q6EEV6 95 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 MTURNQ8N3F0 131 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 LINC00612Q8N6U2 182 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 PPDPFLQ8WWR9 84 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 FAM218AQ96MZ4 157 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 LINC00467Q9BRT7 94 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 PRO1854Q9UHT4 67 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 FAM240AA0A1B0GVK7 77 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 TMEM223A0PJW6 202 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 LYRM9A8MSI8 78 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 LEPROTO15243 131 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 PSMB2P49721 201 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 TSPEAR-AS2P59090 65 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 KRTAP10-2P60368 255 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 RPL39P62891 51 aaKnown RBP2.32□□□□□ -2.04
CDH19-204ENST00000579658 DAZ2Q13117 558 aaKnown RBP2.32□□□□□ -2.04
CDH19-204ENST00000579658 RHOHQ15669 191 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 REG3GQ6UW15 175 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 NTN5Q8WTR8 489 aaPredicted RBP2.32□□□□□ -2.04
CDH19-204ENST00000579658 UPK3BQ9BT76 320 aa2.32□□□□□ -2.04
CDH19-204ENST00000579658 ERG28Q9UKR5 140 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms