RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 SMCPP49901 116 aaPredicted RBP2.59□□□□□ -1.99
PPP4R1-209ENST00000578329 ORMDL3Q8N138 153 aa2.59□□□□□ -1.99
PPP4R1-209ENST00000578329 LINC01561Q8N1V8 128 aa2.59□□□□□ -1.99
PPP4R1-209ENST00000578329 Q8N8P6 123 aa2.59□□□□□ -1.99
PPP4R1-209ENST00000578329 BORCS7Q96B45 105 aa2.59□□□□□ -1.99
PPP4R1-209ENST00000578329 URB1-AS1Q96HZ7 61 aa2.59□□□□□ -1.99
PPP4R1-209ENST00000578329 IGLV5-45A0A087WSX0 123 aa2.58□□□□□ -2
PPP4R1-209ENST00000578329 SMIM1B2RUZ4 78 aa2.58□□□□□ -2
PPP4R1-209ENST00000578329 ZNF861PO60384 105 aa2.58□□□□□ -2
PPP4R1-209ENST00000578329 PPBPP02775 128 aa2.58□□□□□ -2
PPP4R1-209ENST00000578329 IFI27P40305 119 aaPredicted RBP2.58□□□□□ -2
PPP4R1-209ENST00000578329 TMEM141Q96I45 108 aa2.58□□□□□ -2
PPP4R1-209ENST00000578329 IGLV5-37A0A075B6J1 123 aa2.57□□□□□ -2
PPP4R1-209ENST00000578329 TSPAN13O95857 204 aa2.57□□□□□ -2
PPP4R1-209ENST00000578329 IFITM2Q01629 132 aa2.57□□□□□ -2
PPP4R1-209ENST00000578329 PEA15Q15121 130 aa2.57□□□□□ -2
PPP4R1-209ENST00000578329 KIAA1644Q3SXP7 199 aa2.57□□□□□ -2
PPP4R1-209ENST00000578329 ATP5L2Q7Z4Y8 100 aa2.57□□□□□ -2
PPP4R1-209ENST00000578329 Q8IZM0 81 aa2.57□□□□□ -2
PPP4R1-209ENST00000578329 LINC00167Q96N53 147 aa2.57□□□□□ -2
PPP4R1-209ENST00000578329 RETNLBQ9BQ08 111 aa2.57□□□□□ -2
PPP4R1-209ENST00000578329 CTDSP1Q9GZU7 261 aa2.57□□□□□ -2
PPP4R1-209ENST00000578329 PKIGQ9Y2B9 76 aa2.57□□□□□ -2
PPP4R1-209ENST00000578329 TGIF2-C20orf24A0A0A6YYL0 155 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 IGLV5-39A0A0G2JS06 123 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 RPL37AP8A6NKH3 93 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 F8W036 122 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 BCE1O60756 84 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 PRR4Q16378 134 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 TEX43Q6ZNM6 134 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 TMEM18Q96B42 140 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 TOMM6Q96B49 74 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 TP73-AS1Q9UF72 201 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 CYSLTR1Q9Y271 337 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 LAMTOR2Q9Y2Q5 125 aa2.56□□□□□ -2
PPP4R1-209ENST00000578329 CARHSP1Q9Y2V2 147 aaKnown RBP2.56□□□□□ -2
PPP4R1-209ENST00000578329 GAGE10A6NGK3 116 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 F8VRH5 84 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 NPSP0C0P6 89 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 VPREB1P12018 145 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 UBE2BP63146 152 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 KRTAP19-2Q3LHN2 52 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 Q6ZN92 141 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 MRPL55Q7Z7F7 128 aaKnown RBP2.55□□□□□ -2
PPP4R1-209ENST00000578329 PACRGQ96M98 296 aaPredicted RBP2.55□□□□□ -2
PPP4R1-209ENST00000578329 TIMM17AQ99595 171 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 ALKBH7Q9BT30 221 aaPredicted RBP2.55□□□□□ -2
PPP4R1-209ENST00000578329 VCX2Q9H322 139 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 MAP1LC3AQ9H492 121 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 CST9LQ9H4G1 147 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 TOMM7Q9P0U1 55 aa2.55□□□□□ -2
PPP4R1-209ENST00000578329 TINCRA0A1B0GVN0 87 aa2.54□□□□□ -2
PPP4R1-209ENST00000578329 TMEM238C9JI98 176 aa2.54□□□□□ -2
PPP4R1-209ENST00000578329 M0R378 163 aa2.54□□□□□ -2
PPP4R1-209ENST00000578329 S100A8P05109 93 aa2.54□□□□□ -2
PPP4R1-209ENST00000578329 SPINK8P0C7L1 97 aa2.54□□□□□ -2
PPP4R1-209ENST00000578329 RAB5AP20339 215 aa2.54□□□□□ -2
PPP4R1-209ENST00000578329 SMAGPQ0VAQ4 97 aa2.54□□□□□ -2
PPP4R1-209ENST00000578329 ERASQ7Z444 233 aa2.54□□□□□ -2
PPP4R1-209ENST00000578329 C3orf22Q8N5N4 141 aa2.54□□□□□ -2
PPP4R1-209ENST00000578329 KRTAP4-16G5E9R7 235 aaPredicted RBP2.53□□□□□ -2
PPP4R1-209ENST00000578329 NUPR1O60356 82 aa2.53□□□□□ -2
PPP4R1-209ENST00000578329 IGLC3P0DOY3 106 aa2.53□□□□□ -2
PPP4R1-209ENST00000578329 ZNF22P17026 224 aaPredicted RBP2.53□□□□□ -2
PPP4R1-209ENST00000578329 RPL13AP40429 203 aaKnown RBP2.53□□□□□ -2
PPP4R1-209ENST00000578329 HERVK_113P63121 156 aa2.53□□□□□ -2
PPP4R1-209ENST00000578329 PRLHP81277 87 aa2.53□□□□□ -2
PPP4R1-209ENST00000578329 PNRC1Q12796 327 aaPredicted RBP2.53□□□□□ -2
PPP4R1-209ENST00000578329 ORMDL2Q53FV1 153 aa2.53□□□□□ -2
PPP4R1-209ENST00000578329 PDZD11Q5EBL8 140 aa2.53□□□□□ -2
PPP4R1-209ENST00000578329 C6orf226Q5I0X4 101 aa2.53□□□□□ -2
PPP4R1-209ENST00000578329 C10orf91Q5T1B1 145 aa2.53□□□□□ -2
PPP4R1-209ENST00000578329 COX7B2Q8TF08 81 aa2.53□□□□□ -2
PPP4R1-209ENST00000578329 PLEKHB2Q96CS7 222 aa2.53□□□□□ -2
PPP4R1-209ENST00000578329 ANAPC16Q96DE5 110 aa2.53□□□□□ -2
PPP4R1-209ENST00000578329 NXT2Q9NPJ8 142 aaKnown RBP2.53□□□□□ -2
PPP4R1-209ENST00000578329 IGKV2-28A0A075B6P5 120 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 TMEM218A2RU14 115 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 K7EMI3 77 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 IGKV2D-28P01615 120 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 MT-ND4LP03901 98 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 CRYGAP11844 174 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 RAB5BP61020 215 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 CKS1BP61024 79 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 TPRXLQ17RH7 258 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 FAM229BQ4G0N7 80 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 CLLU1Q5K131 121 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 TYMSOSQ8TAI1 123 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 ZNF625Q96I27 306 aaPredicted RBP2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 YPEL4Q96NS1 127 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 SCGB3A1Q96QR1 104 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 C2orf88Q9BSF0 95 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 TMEM126AQ9H061 195 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 SND1-IT1Q9HBX3 110 aa2.52□□□□□ -2.01
PPP4R1-209ENST00000578329 C11orf86A6NJI1 115 aa2.51□□□□□ -2.01
PPP4R1-209ENST00000578329 EIF4EBP3O60516 100 aaPredicted RBP2.51□□□□□ -2.01
PPP4R1-209ENST00000578329 RPL28P46779 137 aaKnown RBP2.51□□□□□ -2.01
PPP4R1-209ENST00000578329 PMVKQ15126 192 aa2.51□□□□□ -2.01
PPP4R1-209ENST00000578329 PMCHL1Q16048 86 aa2.51□□□□□ -2.01
PPP4R1-209ENST00000578329 KRTAP13-3Q3SY46 172 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms