RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 TMEM141Q96I45 108 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 BPESC1Q9GZL8 116 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 ICOSQ9Y6W8 199 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 POLEQ07864 2286 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 PI4KAP42356 2102 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 KIAA1549LQ6ZVL6 1849 aa2.89□□□□□ -1.95
KRT39-202ENST00000578029 MED13LQ71F56 2210 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 IGHV1-45A0A0A0MS14 117 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 IGKV6D-41A0A0C4DH26 115 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 TRBV6-1A0A0K0K1D8 114 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 A0A1B0GW54 56 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 hDV103S1A0JD37 113 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 ZNF137PP52743 207 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 FAM229BQ4G0N7 80 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 CRYBG3Q68DQ2 2970 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 PATE2Q6UY27 113 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 Q8N6K4 173 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 ST20-AS1Q8NBB2 130 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 CLEC2BQ92478 149 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 FAM167A-AS1Q96KT0 104 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 LINC00574Q9H8X3 128 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 S4R3C0 116 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 HIVEP1P15822 2718 aa2.88□□□□□ -1.95
KRT39-202ENST00000578029 NIPBLQ6KC79 2804 aaeCLIP2.87□□□□□ -1.95
KRT39-202ENST00000578029 RP1L1Q8IWN7 2480 aaPredicted RBP2.87□□□□□ -1.95
KRT39-202ENST00000578029 CELSR2Q9HCU4 2923 aa2.87□□□□□ -1.95
KRT39-202ENST00000578029 IGLV3-12A0A075B6K2 115 aa2.87□□□□□ -1.95
KRT39-202ENST00000578029 IGKV3D-7A0A0C4DH55 119 aa2.87□□□□□ -1.95
KRT39-202ENST00000578029 A0A0J9YX75 114 aa2.87□□□□□ -1.95
KRT39-202ENST00000578029 K7ERS5 55 aa2.87□□□□□ -1.95
KRT39-202ENST00000578029 DNAL4O96015 105 aa2.87□□□□□ -1.95
KRT39-202ENST00000578029 EDDM3BP56851 147 aa2.87□□□□□ -1.95
KRT39-202ENST00000578029 RMI2Q96E14 147 aa2.87□□□□□ -1.95
KRT39-202ENST00000578029 NDUFA12Q9UI09 145 aa2.87□□□□□ -1.95
KRT39-202ENST00000578029 PLXNA2O75051 1894 aa2.87□□□□□ -1.95
KRT39-202ENST00000578029 IGHV3-43A0A0B4J1X8 118 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 TRAV22A0A0B4J277 110 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 SDHAF1A6NFY7 115 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 C16orf90A8MZG2 172 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 D6R8Y8 96 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 HCG22E2RYF7 251 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 C3orf84H3BNL1 204 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 H3BSH0 61 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 IGKV1-16P04430 117 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 CD24P25063 80 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 SPINT3P49223 89 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 EML6Q6ZMW3 1958 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 MUC22E2RYF6 1773 aaPredicted RBP2.86□□□□□ -1.95
KRT39-202ENST00000578029 STAB1Q9NY15 2570 aa2.86□□□□□ -1.95
KRT39-202ENST00000578029 A0A087WVE0 104 aa2.85□□□□□ -1.95
KRT39-202ENST00000578029 C11orf86A6NJI1 115 aa2.85□□□□□ -1.95
KRT39-202ENST00000578029 NDUFA3O95167 84 aa2.85□□□□□ -1.95
KRT39-202ENST00000578029 IGLV7-43P04211 117 aa2.85□□□□□ -1.95
KRT39-202ENST00000578029 RPL28P46779 137 aaKnown RBP2.85□□□□□ -1.95
KRT39-202ENST00000578029 LIMD2Q9BT23 127 aa2.85□□□□□ -1.95
KRT39-202ENST00000578029 UTP20O75691 2785 aaKnown RBP2.85□□□□□ -1.95
KRT39-202ENST00000578029 MED13Q9UHV7 2174 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 EML5Q05BV3 1969 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 IGKV2-28A0A075B6P5 120 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 TRAV23DV6A0A075B6W5 121 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 IGHV3-21A0A0B4J1V1 117 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 TRBV7-4A0A0J9YYF1 115 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 IGKV2D-28P01615 120 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 BAALC-AS2P0C853 105 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 MIR17HGQ75NE6 70 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 Q8IYB0 196 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 KLF14Q8TD94 323 aaPredicted RBP2.84□□□□□ -1.95
KRT39-202ENST00000578029 OBSCN-AS1Q96MR7 158 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 SCGB3A1Q96QR1 104 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 CDC42SE1Q9NRR8 79 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 TMEM14BQ9NUH8 114 aa2.84□□□□□ -1.95
KRT39-202ENST00000578029 CCDC168Q8NDH2 2452 aa2.84□□□□□ -1.96
KRT39-202ENST00000578029 ARID1AO14497 2285 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 IGLV3-9A0A075B6K5 115 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 I3L3M4 83 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 PPP1R17O96001 155 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 ARMS2P0C7Q2 107 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 DEFA4P12838 97 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 C9orf116Q5BN46 136 aaPredicted RBP2.83□□□□□ -1.96
KRT39-202ENST00000578029 Q5VV11 94 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 MUSTN1Q8IVN3 82 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 LINC00167Q96N53 147 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 LINC00846Q9NV44 126 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 SNURFQ9Y675 71 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 CSPG4Q6UVK1 2322 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 TANC2Q9HCD6 1990 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 NOTCH1P46531 2555 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 HEATR1Q9H583 2144 aaKnown RBP2.83□□□□□ -1.96
KRT39-202ENST00000578029 APCP25054 2843 aa2.83□□□□□ -1.96
KRT39-202ENST00000578029 COL4A2P08572 1712 aa2.82□□□□□ -1.96
KRT39-202ENST00000578029 AKAP9Q99996 3911 aa2.82□□□□□ -1.96
KRT39-202ENST00000578029 FBN1P35555 2871 aaKnown RBP2.82□□□□□ -1.96
KRT39-202ENST00000578029 IGLV2-18A0A075B6J9 118 aa2.82□□□□□ -1.96
KRT39-202ENST00000578029 TRBV6-8A0A0A6YYG3 113 aa2.82□□□□□ -1.96
KRT39-202ENST00000578029 IGIPA6NJ69 53 aa2.82□□□□□ -1.96
KRT39-202ENST00000578029 H7C2G1 150 aa2.82□□□□□ -1.96
KRT39-202ENST00000578029 IGLV3-1P01715 115 aa2.82□□□□□ -1.96
KRT39-202ENST00000578029 RPL27AP46776 148 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms