RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 PTTG1IPP53801 180 aa8.28□□□□□ -1.08
TSEN54-204ENST00000577197 COX17Q14061 63 aa8.28□□□□□ -1.08
TSEN54-204ENST00000577197 PCP4L1A6NKN8 68 aa8.27□□□□□ -1.09
TSEN54-204ENST00000577197 SPAG11BQ08648 103 aa8.27□□□□□ -1.09
TSEN54-204ENST00000577197 SPANXDQ9BXN6 97 aa8.27□□□□□ -1.09
TSEN54-204ENST00000577197 SPANXCQ9NY87 97 aa8.27□□□□□ -1.09
TSEN54-204ENST00000577197 IFITM1P13164 125 aa8.26□□□□□ -1.09
TSEN54-204ENST00000577197 CKS1BP61024 79 aa8.26□□□□□ -1.09
TSEN54-204ENST00000577197 CTAG1AP78358 180 aa8.26□□□□□ -1.09
TSEN54-204ENST00000577197 LBHQ53QV2 105 aaPredicted RBP8.26□□□□□ -1.09
TSEN54-204ENST00000577197 NTN5Q8WTR8 489 aaPredicted RBP8.26□□□□□ -1.09
TSEN54-204ENST00000577197 KRTAP1-5Q9BYS1 174 aa8.26□□□□□ -1.09
TSEN54-204ENST00000577197 TOMM7Q9P0U1 55 aa8.26□□□□□ -1.09
TSEN54-204ENST00000577197 VPS13DQ5THJ4 4388 aa8.25□□□□□ -1.09
TSEN54-204ENST00000577197 TRBV30A0A0K0K1B3 111 aa8.25□□□□□ -1.09
TSEN54-204ENST00000577197 C14orf177Q52M58 125 aa8.25□□□□□ -1.09
TSEN54-204ENST00000577197 Q6ZR54 194 aa8.25□□□□□ -1.09
TSEN54-204ENST00000577197 C15orf56Q8N910 161 aa8.25□□□□□ -1.09
TSEN54-204ENST00000577197 LITAFQ99732 161 aa8.25□□□□□ -1.09
TSEN54-204ENST00000577197 Q9HAA7 133 aa8.25□□□□□ -1.09
TSEN54-204ENST00000577197 ZNF561-AS1K7EIQ3 104 aa8.24□□□□□ -1.09
TSEN54-204ENST00000577197 DNAH1Q9P2D7 4330 aa8.24□□□□□ -1.09
TSEN54-204ENST00000577197 TMEM238LA0A1B0GVL6 79 aa8.23□□□□□ -1.09
TSEN54-204ENST00000577197 A6NJY4 79 aa8.23□□□□□ -1.09
TSEN54-204ENST00000577197 RNF151Q2KHN1 245 aa8.23□□□□□ -1.09
TSEN54-204ENST00000577197 CEND1Q8N111 149 aa8.23□□□□□ -1.09
TSEN54-204ENST00000577197 HIST1H4GQ99525 98 aa8.23□□□□□ -1.09
TSEN54-204ENST00000577197 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.09
TSEN54-204ENST00000577197 BVES-AS1Q5T3Y7 98 aa8.22□□□□□ -1.09
TSEN54-204ENST00000577197 LOC107984156A0A0G2JMH3 177 aa8.21□□□□□ -1.1
TSEN54-204ENST00000577197 M0R2N4 97 aa8.21□□□□□ -1.1
TSEN54-204ENST00000577197 RPL24P83731 157 aaKnown RBP8.21□□□□□ -1.1
TSEN54-204ENST00000577197 MEIG1Q5JSS6 88 aa8.21□□□□□ -1.1
TSEN54-204ENST00000577197 Q6ZRN7 208 aaPredicted RBP8.21□□□□□ -1.1
TSEN54-204ENST00000577197 ARL17AQ8IVW1 177 aa8.21□□□□□ -1.1
TSEN54-204ENST00000577197 ERG28Q9UKR5 140 aa8.21□□□□□ -1.1
TSEN54-204ENST00000577197 USP17L23D6RBM5 183 aa8.2□□□□□ -1.1
TSEN54-204ENST00000577197 PSCAO43653 123 aa8.2□□□□□ -1.1
TSEN54-204ENST00000577197 LYSTQ99698 3801 aa8.2□□□□□ -1.1
TSEN54-204ENST00000577197 A6NDN8 102 aa8.19□□□□□ -1.1
TSEN54-204ENST00000577197 C6orf223Q8N319 242 aa8.19□□□□□ -1.1
TSEN54-204ENST00000577197 CAMK2N2Q96S95 79 aa8.19□□□□□ -1.1
TSEN54-204ENST00000577197 SNHG12Q9BXW3 62 aa8.19□□□□□ -1.1
TSEN54-204ENST00000577197 A0A1B0GWB2 263 aa8.18□□□□□ -1.1
TSEN54-204ENST00000577197 CNBPP62633 177 aaKnown RBP8.18□□□□□ -1.1
TSEN54-204ENST00000577197 ADAMTSL4-AS1Q5T5F5 129 aa8.18□□□□□ -1.1
TSEN54-204ENST00000577197 C1orf134Q5TEV5 83 aa8.18□□□□□ -1.1
TSEN54-204ENST00000577197 C2orf82Q6UX34 121 aa8.18□□□□□ -1.1
TSEN54-204ENST00000577197 PKIGQ9Y2B9 76 aa8.18□□□□□ -1.1
TSEN54-204ENST00000577197 DNAH6Q9C0G6 4158 aa8.18□□□□□ -1.1
TSEN54-204ENST00000577197 SACSQ9NZJ4 4579 aa8.17□□□□□ -1.1
TSEN54-204ENST00000577197 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.17□□□□□ -1.1
TSEN54-204ENST00000577197 TLX1NBP0CAT3 122 aa8.17□□□□□ -1.1
TSEN54-204ENST00000577197 SMIM13P0DJ93 91 aa8.17□□□□□ -1.1
TSEN54-204ENST00000577197 HINT1P49773 126 aaPredicted RBP8.17□□□□□ -1.1
TSEN54-204ENST00000577197 SYCNQ0VAF6 134 aa8.17□□□□□ -1.1
TSEN54-204ENST00000577197 UNQ6190/PRO20217Q6UXQ8 127 aa8.17□□□□□ -1.1
TSEN54-204ENST00000577197 LINC00308Q8TCZ7 52 aa8.17□□□□□ -1.1
TSEN54-204ENST00000577197 LINC00158P58513 81 aa8.16□□□□□ -1.1
TSEN54-204ENST00000577197 COL5A1-AS1Q5SY13 56 aa8.16□□□□□ -1.1
TSEN54-204ENST00000577197 KMT2CQ8NEZ4 4911 aaKnown RBP8.16□□□□□ -1.1
TSEN54-204ENST00000577197 C6orf48Q9UBA6 75 aa8.16□□□□□ -1.1
TSEN54-204ENST00000577197 A0A0B4J2C4 111 aa8.15□□□□□ -1.1
TSEN54-204ENST00000577197 LRCOL1A6NCL2 159 aa8.15□□□□□ -1.1
TSEN54-204ENST00000577197 FXYD2P54710 66 aa8.15□□□□□ -1.1
TSEN54-204ENST00000577197 HIGD2BQ4VC39 106 aa8.15□□□□□ -1.1
TSEN54-204ENST00000577197 MIR7-3HGQ8N6C7 128 aa8.15□□□□□ -1.1
TSEN54-204ENST00000577197 CARD19Q96LW7 228 aa8.15□□□□□ -1.1
TSEN54-204ENST00000577197 RYR2Q92736 4967 aa8.15□□□□□ -1.11
TSEN54-204ENST00000577197 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
TSEN54-204ENST00000577197 EREGO14944 169 aa8.14□□□□□ -1.11
TSEN54-204ENST00000577197 NDUFC2O95298 119 aa8.14□□□□□ -1.11
TSEN54-204ENST00000577197 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
TSEN54-204ENST00000577197 Q6ZRU5 148 aa8.14□□□□□ -1.11
TSEN54-204ENST00000577197 MUSTN1Q8IVN3 82 aa8.14□□□□□ -1.11
TSEN54-204ENST00000577197 PFN2P35080 140 aa8.12□□□□□ -1.11
TSEN54-204ENST00000577197 KMT2AQ03164 3969 aa8.11□□□□□ -1.11
TSEN54-204ENST00000577197 A4D1N5 150 aa8.11□□□□□ -1.11
TSEN54-204ENST00000577197 LINC00526Q96FQ7 95 aa8.11□□□□□ -1.11
TSEN54-204ENST00000577197 HYDINQ4G0P3 5121 aa8.1□□□□□ -1.11
TSEN54-204ENST00000577197 RTL8CO15255 209 aa8.1□□□□□ -1.11
TSEN54-204ENST00000577197 BATFQ16520 125 aa8.1□□□□□ -1.11
TSEN54-204ENST00000577197 SOSTDC1Q6X4U4 206 aa8.1□□□□□ -1.11
TSEN54-204ENST00000577197 LINC00336Q6ZUF6 198 aa8.1□□□□□ -1.11
TSEN54-204ENST00000577197 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
TSEN54-204ENST00000577197 NHP2Q9NX24 153 aaKnown RBP8.1□□□□□ -1.11
TSEN54-204ENST00000577197 A0A087WTM6 91 aa8.09□□□□□ -1.11
TSEN54-204ENST00000577197 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.11
TSEN54-204ENST00000577197 SLPIP03973 132 aa8.09□□□□□ -1.11
TSEN54-204ENST00000577197 C9orf116Q5BN46 136 aaPredicted RBP8.09□□□□□ -1.11
TSEN54-204ENST00000577197 Q8N814 137 aa8.09□□□□□ -1.11
TSEN54-204ENST00000577197 DAND5Q8N907 189 aa8.09□□□□□ -1.11
TSEN54-204ENST00000577197 TRAV13-2A0A0B4J235 113 aa8.08□□□□□ -1.12
TSEN54-204ENST00000577197 TRBV10-2A0A0K0K1G8 114 aa8.08□□□□□ -1.12
TSEN54-204ENST00000577197 A0A0U1RRA0 63 aa8.08□□□□□ -1.12
TSEN54-204ENST00000577197 CFC1BP0CG36 223 aa8.08□□□□□ -1.12
TSEN54-204ENST00000577197 CFC1P0CG37 223 aa8.08□□□□□ -1.12
TSEN54-204ENST00000577197 WFDC2Q14508 124 aa8.08□□□□□ -1.12
TSEN54-204ENST00000577197 PRO1854Q9UHT4 67 aa8.08□□□□□ -1.12
TSEN54-204ENST00000577197 PLA2G2DQ9UNK4 145 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms