RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
ERCC4-208ENST00000576348 ZNF625Q96I27 306 aaPredicted RBP10.84□□□□□ -0.67
ERCC4-208ENST00000576348 PRO1933Q9H354 126 aa10.84□□□□□ -0.67
ERCC4-208ENST00000576348 LRCOL1A6NCL2 159 aa10.83□□□□□ -0.68
ERCC4-208ENST00000576348 TSTD3H0UI37 97 aa10.83□□□□□ -0.68
ERCC4-208ENST00000576348 MEIG1Q5JSS6 88 aa10.83□□□□□ -0.68
ERCC4-208ENST00000576348 DNAH1Q9P2D7 4330 aa10.83□□□□□ -0.68
ERCC4-208ENST00000576348 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.82□□□□□ -0.68
ERCC4-208ENST00000576348 RTL8CO15255 209 aa10.82□□□□□ -0.68
ERCC4-208ENST00000576348 UNQ6190/PRO20217Q6UXQ8 127 aa10.82□□□□□ -0.68
ERCC4-208ENST00000576348 BOD1L2Q8IYS8 172 aa10.82□□□□□ -0.68
ERCC4-208ENST00000576348 CARD19Q96LW7 228 aa10.82□□□□□ -0.68
ERCC4-208ENST00000576348 UQCR10Q9UDW1 63 aa10.82□□□□□ -0.68
ERCC4-208ENST00000576348 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.81□□□□□ -0.68
ERCC4-208ENST00000576348 LINC00587B1AMM8 73 aa10.81□□□□□ -0.68
ERCC4-208ENST00000576348 DLEU1O43261 78 aa10.81□□□□□ -0.68
ERCC4-208ENST00000576348 CIRBPQ14011 172 aaKnown RBP10.81□□□□□ -0.68
ERCC4-208ENST00000576348 Q8N814 137 aa10.81□□□□□ -0.68
ERCC4-208ENST00000576348 LYSTQ99698 3801 aa10.81□□□□□ -0.68
ERCC4-208ENST00000576348 A0A0J9YXY3 114 aa10.79□□□□□ -0.68
ERCC4-208ENST00000576348 TRBV30A0A0K0K1B3 111 aa10.79□□□□□ -0.68
ERCC4-208ENST00000576348 TNP2Q05952 138 aa10.79□□□□□ -0.68
ERCC4-208ENST00000576348 C10orf25Q5T742 122 aa10.79□□□□□ -0.68
ERCC4-208ENST00000576348 Q6ZRU5 148 aa10.79□□□□□ -0.68
ERCC4-208ENST00000576348 ERG28Q9UKR5 140 aa10.79□□□□□ -0.68
ERCC4-208ENST00000576348 LINC00158P58513 81 aa10.78□□□□□ -0.68
ERCC4-208ENST00000576348 A0A0U1RRA0 63 aa10.77□□□□□ -0.69
ERCC4-208ENST00000576348 PFN2P35080 140 aa10.77□□□□□ -0.69
ERCC4-208ENST00000576348 CNBPP62633 177 aaKnown RBP10.77□□□□□ -0.69
ERCC4-208ENST00000576348 LINC00336Q6ZUF6 198 aa10.77□□□□□ -0.69
ERCC4-208ENST00000576348 MIEN1Q9BRT3 115 aa10.77□□□□□ -0.69
ERCC4-208ENST00000576348 C6orf48Q9UBA6 75 aa10.77□□□□□ -0.69
ERCC4-208ENST00000576348 TP73-AS1Q9UF72 201 aa10.77□□□□□ -0.69
ERCC4-208ENST00000576348 TMEM238C9JI98 176 aa10.76□□□□□ -0.69
ERCC4-208ENST00000576348 SMIM13P0DJ93 91 aa10.76□□□□□ -0.69
ERCC4-208ENST00000576348 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
ERCC4-208ENST00000576348 RNF151Q2KHN1 245 aa10.76□□□□□ -0.69
ERCC4-208ENST00000576348 C9orf116Q5BN46 136 aaPredicted RBP10.75□□□□□ -0.69
ERCC4-208ENST00000576348 DNAH6Q9C0G6 4158 aa10.74□□□□□ -0.69
ERCC4-208ENST00000576348 TIMM17BO60830 172 aa10.74□□□□□ -0.69
ERCC4-208ENST00000576348 SLPIP03973 132 aa10.74□□□□□ -0.69
ERCC4-208ENST00000576348 COX17Q14061 63 aa10.74□□□□□ -0.69
ERCC4-208ENST00000576348 PKIGQ9Y2B9 76 aa10.74□□□□□ -0.69
ERCC4-208ENST00000576348 IGLV5-52A0A0A0MRZ9 124 aa10.73□□□□□ -0.69
ERCC4-208ENST00000576348 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.69
ERCC4-208ENST00000576348 RPL18AQ02543 176 aaKnown RBP10.72□□□□□ -0.69
ERCC4-208ENST00000576348 HIST1H4GQ99525 98 aa10.72□□□□□ -0.69
ERCC4-208ENST00000576348 HIGD1BQ9P298 99 aa10.72□□□□□ -0.69
ERCC4-208ENST00000576348 LOC107984640A0A0U1RRK4 108 aa10.71□□□□□ -0.69
ERCC4-208ENST00000576348 GCSHP23434 173 aa10.71□□□□□ -0.69
ERCC4-208ENST00000576348 NDUFC2-KCTD14E9PQ53 114 aa10.7□□□□□ -0.7
ERCC4-208ENST00000576348 C2orf91Q6ZV80 131 aa10.7□□□□□ -0.7
ERCC4-208ENST00000576348 MIR7-3HGQ8N6C7 128 aa10.7□□□□□ -0.7
ERCC4-208ENST00000576348 DAND5Q8N907 189 aa10.7□□□□□ -0.7
ERCC4-208ENST00000576348 COPS9Q8WXC6 57 aa10.7□□□□□ -0.7
ERCC4-208ENST00000576348 SPANXB1Q9NS25 103 aaPredicted RBP10.69□□□□□ -0.7
ERCC4-208ENST00000576348 GAGE2BQ13066 116 aa10.68□□□□□ -0.7
ERCC4-208ENST00000576348 GAGE2EQ4V326 116 aa10.68□□□□□ -0.7
ERCC4-208ENST00000576348 ADAMTSL4-AS1Q5T5F5 129 aa10.68□□□□□ -0.7
ERCC4-208ENST00000576348 Q6ZVH6 145 aa10.68□□□□□ -0.7
ERCC4-208ENST00000576348 C9orf163Q8N9P6 203 aa10.68□□□□□ -0.7
ERCC4-208ENST00000576348 SPANXDQ9BXN6 97 aa10.68□□□□□ -0.7
ERCC4-208ENST00000576348 PGPEP1Q9NXJ5 209 aa10.68□□□□□ -0.7
ERCC4-208ENST00000576348 SPANXCQ9NY87 97 aa10.68□□□□□ -0.7
ERCC4-208ENST00000576348 GAGE2DQ9UEU5 116 aa10.68□□□□□ -0.7
ERCC4-208ENST00000576348 PCP4L1A6NKN8 68 aa10.67□□□□□ -0.7
ERCC4-208ENST00000576348 DDTP30046 118 aa10.67□□□□□ -0.7
ERCC4-208ENST00000576348 NPC2P61916 151 aa10.67□□□□□ -0.7
ERCC4-208ENST00000576348 LITAFQ99732 161 aa10.67□□□□□ -0.7
ERCC4-208ENST00000576348 TLX1NBP0CAT3 122 aa10.66□□□□□ -0.7
ERCC4-208ENST00000576348 IFITM1P13164 125 aa10.66□□□□□ -0.7
ERCC4-208ENST00000576348 FUSP35637 526 aaKnown RBP eCLIP10.66□□□□□ -0.7
ERCC4-208ENST00000576348 HSD52Q0P140 79 aa10.66□□□□□ -0.7
ERCC4-208ENST00000576348 TAL2Q16559 108 aa10.65□□□□□ -0.7
ERCC4-208ENST00000576348 SND1-IT1Q9HBX3 110 aa10.65□□□□□ -0.7
ERCC4-208ENST00000576348 CTAG1AP78358 180 aa10.64□□□□□ -0.71
ERCC4-208ENST00000576348 LINC01620Q4KN68 170 aa10.64□□□□□ -0.71
ERCC4-208ENST00000576348 Q6ZRP5 223 aa10.64□□□□□ -0.71
ERCC4-208ENST00000576348 LINC00308Q8TCZ7 52 aa10.64□□□□□ -0.71
ERCC4-208ENST00000576348 XAGE1AQ9HD64 81 aa10.64□□□□□ -0.71
ERCC4-208ENST00000576348 KMT2AQ03164 3969 aa10.64□□□□□ -0.71
ERCC4-208ENST00000576348 IGKV2-24A0A0C4DH68 120 aa10.63□□□□□ -0.71
ERCC4-208ENST00000576348 KRTAP10-2P60368 255 aa10.63□□□□□ -0.71
ERCC4-208ENST00000576348 MUSTN1Q8IVN3 82 aa10.63□□□□□ -0.71
ERCC4-208ENST00000576348 PTTG1IPP53801 180 aa10.62□□□□□ -0.71
ERCC4-208ENST00000576348 RPL24P83731 157 aaKnown RBP10.62□□□□□ -0.71
ERCC4-208ENST00000576348 C16orf90A8MZG2 172 aa10.61□□□□□ -0.71
ERCC4-208ENST00000576348 M0R143 59 aa10.61□□□□□ -0.71
ERCC4-208ENST00000576348 CEND1Q8N111 149 aa10.61□□□□□ -0.71
ERCC4-208ENST00000576348 DPH3Q96FX2 82 aa10.61□□□□□ -0.71
ERCC4-208ENST00000576348 LINC00474Q9P2X8 69 aa10.61□□□□□ -0.71
ERCC4-208ENST00000576348 A0A096LNI7 61 aa10.6□□□□□ -0.71
ERCC4-208ENST00000576348 SDIM1Q6ZPB5 146 aa10.6□□□□□ -0.71
ERCC4-208ENST00000576348 TMEM238LA0A1B0GVL6 79 aa10.59□□□□□ -0.71
ERCC4-208ENST00000576348 A6NJY4 79 aa10.59□□□□□ -0.71
ERCC4-208ENST00000576348 SACSQ9NZJ4 4579 aa10.58□□□□□ -0.72
ERCC4-208ENST00000576348 SOSTDC1Q6X4U4 206 aa10.58□□□□□ -0.72
ERCC4-208ENST00000576348 CHTF8P0CG12 524 aa10.57□□□□□ -0.72
ERCC4-208ENST00000576348 HINT1P49773 126 aaPredicted RBP10.57□□□□□ -0.72
ERCC4-208ENST00000576348 C9orf129Q5T035 196 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms