RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 PRR34Q9NV39 138 aa4.68□□□□□ -1.66
SMG6-217ENST00000575338 DEFB131BA0A096LNP1 70 aa4.67□□□□□ -1.66
SMG6-217ENST00000575338 F8WDY8 70 aa4.67□□□□□ -1.66
SMG6-217ENST00000575338 G3V4G9 280 aa4.67□□□□□ -1.66
SMG6-217ENST00000575338 H3BT86 120 aa4.67□□□□□ -1.66
SMG6-217ENST00000575338 TEN1Q86WV5 123 aa4.67□□□□□ -1.66
SMG6-217ENST00000575338 MIR7-3HGQ8N6C7 128 aa4.67□□□□□ -1.66
SMG6-217ENST00000575338 CARD19Q96LW7 228 aa4.67□□□□□ -1.66
SMG6-217ENST00000575338 KLK5Q9Y337 293 aaPredicted RBP4.67□□□□□ -1.66
SMG6-217ENST00000575338 A0A0J9YWU9 116 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 TRBV10-2A0A0K0K1G8 114 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 A0A0U1RRA0 63 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 TRIAP1O43715 76 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 SLC25A20O43772 301 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 SNCGO76070 127 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 NDUFC2O95298 119 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 LINC01620Q4KN68 170 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 CLPSL2Q6UWE3 100 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 Q6ZTC4 211 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 DAND5Q8N907 189 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 PPDPFLQ8WWR9 84 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 LINC01600Q96MT4 127 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 PRO0461Q9UI25 63 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 KLK12Q9UKR0 248 aa4.66□□□□□ -1.66
SMG6-217ENST00000575338 DNHD1Q96M86 4753 aa4.65□□□□□ -1.66
SMG6-217ENST00000575338 GAGE12HA6NDE8 117 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 C9JAW5 83 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 H0YGX0 51 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 LST1O00453 97 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 PFN2P35080 140 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 RPL28P46779 137 aaKnown RBP4.65□□□□□ -1.67
SMG6-217ENST00000575338 FOXI1Q12951 378 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 WFDC2Q14508 124 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 RNF151Q2KHN1 245 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 ETDBQ3ZM63 59 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 ANKRD29Q8N6D5 301 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 TM2D3Q9BRN9 247 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 RETNQ9HD89 108 aa4.65□□□□□ -1.67
SMG6-217ENST00000575338 IGLV10-54A0A075B6I4 117 aa4.64□□□□□ -1.67
SMG6-217ENST00000575338 TRACP01848 142 aa4.64□□□□□ -1.67
SMG6-217ENST00000575338 SPAG11BQ08648 103 aa4.64□□□□□ -1.67
SMG6-217ENST00000575338 LINC01556Q5JQF7 62 aa4.64□□□□□ -1.67
SMG6-217ENST00000575338 SOSTDC1Q6X4U4 206 aa4.64□□□□□ -1.67
SMG6-217ENST00000575338 RMI2Q96E14 147 aa4.64□□□□□ -1.67
SMG6-217ENST00000575338 C1orf43Q9BWL3 253 aa4.64□□□□□ -1.67
SMG6-217ENST00000575338 FBN3Q75N90 2809 aa4.64□□□□□ -1.67
SMG6-217ENST00000575338 TENM1Q9UKZ4 2725 aa4.64□□□□□ -1.67
SMG6-217ENST00000575338 GVQW2A0A096LPI5 108 aaPredicted RBP4.63□□□□□ -1.67
SMG6-217ENST00000575338 ZNF561-AS1K7EIQ3 104 aa4.63□□□□□ -1.67
SMG6-217ENST00000575338 EIF4EBP3O60516 100 aaPredicted RBP4.63□□□□□ -1.67
SMG6-217ENST00000575338 DNAL4O96015 105 aa4.63□□□□□ -1.67
SMG6-217ENST00000575338 CCL18P55774 89 aa4.63□□□□□ -1.67
SMG6-217ENST00000575338 NANOS2P60321 138 aaKnown RBP4.63□□□□□ -1.67
SMG6-217ENST00000575338 KIAA0087Q14695 138 aa4.63□□□□□ -1.67
SMG6-217ENST00000575338 DEFB121Q5J5C9 76 aa4.63□□□□□ -1.67
SMG6-217ENST00000575338 UBE2WQ96B02 151 aa4.63□□□□□ -1.67
SMG6-217ENST00000575338 TMEM126AQ9H061 195 aa4.63□□□□□ -1.67
SMG6-217ENST00000575338 COL6A5A8TX70 2615 aa4.62□□□□□ -1.67
SMG6-217ENST00000575338 VWFP04275 2813 aa4.62□□□□□ -1.67
SMG6-217ENST00000575338 A0A1B0GX51 115 aa4.62□□□□□ -1.67
SMG6-217ENST00000575338 ENHOQ6UWT2 76 aa4.62□□□□□ -1.67
SMG6-217ENST00000575338 C2orf82Q6UX34 121 aa4.62□□□□□ -1.67
SMG6-217ENST00000575338 OR13C6PQ8NH95 151 aa4.62□□□□□ -1.67
SMG6-217ENST00000575338 C2orf48Q96LS8 159 aa4.62□□□□□ -1.67
SMG6-217ENST00000575338 GHRHP01286 108 aa4.61□□□□□ -1.67
SMG6-217ENST00000575338 DNAH10OSP0CZ25 163 aa4.61□□□□□ -1.67
SMG6-217ENST00000575338 ESRGQ1W209 222 aa4.61□□□□□ -1.67
SMG6-217ENST00000575338 WFDC10BQ8IUB3 73 aa4.61□□□□□ -1.67
SMG6-217ENST00000575338 H3BQ85 93 aa4.6□□□□□ -1.67
SMG6-217ENST00000575338 K7EIL1 84 aa4.6□□□□□ -1.67
SMG6-217ENST00000575338 SMCPP49901 116 aaPredicted RBP4.6□□□□□ -1.67
SMG6-217ENST00000575338 S100A7L2Q5SY68 101 aa4.6□□□□□ -1.67
SMG6-217ENST00000575338 MTURNQ8N3F0 131 aa4.6□□□□□ -1.67
SMG6-217ENST00000575338 LINC00337Q8N6G1 96 aa4.6□□□□□ -1.67
SMG6-217ENST00000575338 NTN5Q8WTR8 489 aaPredicted RBP4.6□□□□□ -1.67
SMG6-217ENST00000575338 CAMK2N2Q96S95 79 aa4.6□□□□□ -1.67
SMG6-217ENST00000575338 IGKV2-28A0A075B6P5 120 aa4.59□□□□□ -1.67
SMG6-217ENST00000575338 IGKV2D-28P01615 120 aa4.59□□□□□ -1.67
SMG6-217ENST00000575338 INAFM2P0DMQ5 153 aa4.59□□□□□ -1.67
SMG6-217ENST00000575338 CLEC2BQ92478 149 aa4.59□□□□□ -1.67
SMG6-217ENST00000575338 MDFIQ99750 246 aa4.59□□□□□ -1.67
SMG6-217ENST00000575338 UPK3BQ9BT76 320 aa4.59□□□□□ -1.67
SMG6-217ENST00000575338 IGKV2D-24A0A075B6R9 120 aa4.58□□□□□ -1.68
SMG6-217ENST00000575338 ACYP1P07311 99 aa4.58□□□□□ -1.68
SMG6-217ENST00000575338 Q8N3U1 123 aa4.58□□□□□ -1.68
SMG6-217ENST00000575338 SMIM11BQ8TCY0 68 aa4.58□□□□□ -1.68
SMG6-217ENST00000575338 MRAPQ8TCY5 172 aa4.58□□□□□ -1.68
SMG6-217ENST00000575338 SIGMAR1Q99720 223 aa4.58□□□□□ -1.68
SMG6-217ENST00000575338 NBEAL2Q6ZNJ1 2754 aa4.57□□□□□ -1.68
SMG6-217ENST00000575338 STAB1Q9NY15 2570 aa4.57□□□□□ -1.68
SMG6-217ENST00000575338 FAM240AA0A1B0GVK7 77 aa4.57□□□□□ -1.68
SMG6-217ENST00000575338 NHLRC4P0CG21 123 aaPredicted RBP4.57□□□□□ -1.68
SMG6-217ENST00000575338 SCGB1A1P11684 91 aa4.57□□□□□ -1.68
SMG6-217ENST00000575338 UNQ6190/PRO20217Q6UXQ8 127 aa4.57□□□□□ -1.68
SMG6-217ENST00000575338 B9D2Q9BPU9 175 aa4.57□□□□□ -1.68
SMG6-217ENST00000575338 TRRAPQ9Y4A5 3859 aa4.56□□□□□ -1.68
SMG6-217ENST00000575338 NDUFC2-KCTD14E9PQ53 114 aa4.56□□□□□ -1.68
SMG6-217ENST00000575338 BAALC-AS2P0C853 105 aa4.56□□□□□ -1.68
SMG6-217ENST00000575338 C21orf62-AS1Q17RA5 79 aa4.56□□□□□ -1.68
SMG6-217ENST00000575338 ORMDL1Q9P0S3 153 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms