RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CEND1Q8N111 149 aa15.9■□□□□ 0.14
ATPAF1-213ENST00000574428 C15orf56Q8N910 161 aa15.9■□□□□ 0.14
ATPAF1-213ENST00000574428 FXYD2P54710 66 aa15.9■□□□□ 0.14
ATPAF1-213ENST00000574428 COX7B2Q8TF08 81 aa15.9■□□□□ 0.14
ATPAF1-213ENST00000574428 HIST1H4GQ99525 98 aa15.9■□□□□ 0.14
ATPAF1-213ENST00000574428 LECT2O14960 151 aa15.89■□□□□ 0.13
ATPAF1-213ENST00000574428 TAX1BP3O14907 124 aa15.88■□□□□ 0.13
ATPAF1-213ENST00000574428 DNAH10Q8IVF4 4471 aa15.88■□□□□ 0.13
ATPAF1-213ENST00000574428 A6NDN8 102 aa15.87■□□□□ 0.13
ATPAF1-213ENST00000574428 SPAG11BQ08648 103 aa15.87■□□□□ 0.13
ATPAF1-213ENST00000574428 HIGD2BQ4VC39 106 aa15.87■□□□□ 0.13
ATPAF1-213ENST00000574428 LINC00526Q96FQ7 95 aa15.87■□□□□ 0.13
ATPAF1-213ENST00000574428 USP17L23D6RBM5 183 aa15.87■□□□□ 0.13
ATPAF1-213ENST00000574428 C1orf134Q5TEV5 83 aa15.87■□□□□ 0.13
ATPAF1-213ENST00000574428 PRSS2P07478 247 aa15.86■□□□□ 0.13
ATPAF1-213ENST00000574428 WFDC2Q14508 124 aa15.85■□□□□ 0.13
ATPAF1-213ENST00000574428 KIAA0087Q14695 138 aa15.85■□□□□ 0.13
ATPAF1-213ENST00000574428 Q8IZM0 81 aa15.85■□□□□ 0.13
ATPAF1-213ENST00000574428 C6orf226Q5I0X4 101 aa15.85■□□□□ 0.13
ATPAF1-213ENST00000574428 CFAP161Q6P656 301 aa15.85■□□□□ 0.13
ATPAF1-213ENST00000574428 PTTG1IPP53801 180 aa15.83■□□□□ 0.12
ATPAF1-213ENST00000574428 NDUFA12Q9UI09 145 aa15.83■□□□□ 0.12
ATPAF1-213ENST00000574428 HYDINQ4G0P3 5121 aa15.83■□□□□ 0.12
ATPAF1-213ENST00000574428 GVQW2A0A096LPI5 108 aaPredicted RBP15.82■□□□□ 0.12
ATPAF1-213ENST00000574428 SPANXB1Q9NS25 103 aaPredicted RBP15.82■□□□□ 0.12
ATPAF1-213ENST00000574428 C2orf82Q6UX34 121 aa15.82■□□□□ 0.12
ATPAF1-213ENST00000574428 ZNF561-AS1K7EIQ3 104 aa15.81■□□□□ 0.12
ATPAF1-213ENST00000574428 SRSF9Q13242 221 aaKnown RBP eCLIP15.8■□□□□ 0.12
ATPAF1-213ENST00000574428 SACSQ9NZJ4 4579 aa15.8■□□□□ 0.12
ATPAF1-213ENST00000574428 DNAH2Q9P225 4427 aa15.8■□□□□ 0.12
ATPAF1-213ENST00000574428 A0A0J9YXY3 114 aa15.8■□□□□ 0.12
ATPAF1-213ENST00000574428 NDUFA1O15239 70 aa15.8■□□□□ 0.12
ATPAF1-213ENST00000574428 CKS1BP61024 79 aa15.8■□□□□ 0.12
ATPAF1-213ENST00000574428 ZNF625Q96I27 306 aaPredicted RBP15.8■□□□□ 0.12
ATPAF1-213ENST00000574428 LRCOL1A6NCL2 159 aa15.79■□□□□ 0.12
ATPAF1-213ENST00000574428 NTN5Q8WTR8 489 aaPredicted RBP15.78■□□□□ 0.12
ATPAF1-213ENST00000574428 NHP2Q9NX24 153 aaKnown RBP15.78■□□□□ 0.12
ATPAF1-213ENST00000574428 K7ERJ3 54 aa15.77■□□□□ 0.11
ATPAF1-213ENST00000574428 SMIM13P0DJ93 91 aa15.76■□□□□ 0.11
ATPAF1-213ENST00000574428 CXCL5P42830 114 aa15.75■□□□□ 0.11
ATPAF1-213ENST00000574428 C10orf25Q5T742 122 aa15.75■□□□□ 0.11
ATPAF1-213ENST00000574428 UNQ6190/PRO20217Q6UXQ8 127 aa15.75■□□□□ 0.11
ATPAF1-213ENST00000574428 RAB37Q96AX2 223 aa15.75■□□□□ 0.11
ATPAF1-213ENST00000574428 CAMK2N2Q96S95 79 aa15.75■□□□□ 0.11
ATPAF1-213ENST00000574428 TMEM238C9JI98 176 aa15.74■□□□□ 0.11
ATPAF1-213ENST00000574428 RTL8CO15255 209 aa15.73■□□□□ 0.11
ATPAF1-213ENST00000574428 C2orf48Q96LS8 159 aa15.73■□□□□ 0.11
ATPAF1-213ENST00000574428 LITAFQ99732 161 aa15.73■□□□□ 0.11
ATPAF1-213ENST00000574428 C9orf118A6NHY6 69 aa15.72■□□□□ 0.11
ATPAF1-213ENST00000574428 A0A087WTM6 91 aa15.72■□□□□ 0.11
ATPAF1-213ENST00000574428 A0A1B0GWB2 263 aa15.71■□□□□ 0.11
ATPAF1-213ENST00000574428 SLPIP03973 132 aa15.71■□□□□ 0.11
ATPAF1-213ENST00000574428 HERV-K104P63124 156 aa15.71■□□□□ 0.11
ATPAF1-213ENST00000574428 C14orf177Q52M58 125 aa15.71■□□□□ 0.11
ATPAF1-213ENST00000574428 SFTA2Q6UW10 78 aa15.71■□□□□ 0.11
ATPAF1-213ENST00000574428 Q6ZRU5 148 aa15.71■□□□□ 0.11
ATPAF1-213ENST00000574428 TMEM238LA0A1B0GVL6 79 aa15.7■□□□□ 0.1
ATPAF1-213ENST00000574428 A6NJY4 79 aa15.7■□□□□ 0.1
ATPAF1-213ENST00000574428 SYCNQ0VAF6 134 aa15.7■□□□□ 0.1
ATPAF1-213ENST00000574428 NAA38Q9BRA0 125 aaKnown RBP15.7■□□□□ 0.1
ATPAF1-213ENST00000574428 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.69■□□□□ 0.1
ATPAF1-213ENST00000574428 C9orf116Q5BN46 136 aaPredicted RBP15.69■□□□□ 0.1
ATPAF1-213ENST00000574428 KMT2CQ8NEZ4 4911 aaKnown RBP15.69■□□□□ 0.1
ATPAF1-213ENST00000574428 H3BUT2 72 aa15.68■□□□□ 0.1
ATPAF1-213ENST00000574428 TNP2Q05952 138 aa15.68■□□□□ 0.1
ATPAF1-213ENST00000574428 C6orf48Q9UBA6 75 aa15.68■□□□□ 0.1
ATPAF1-213ENST00000574428 VAMP3Q15836 100 aa15.67■□□□□ 0.1
ATPAF1-213ENST00000574428 MEIG1Q5JSS6 88 aa15.67■□□□□ 0.1
ATPAF1-213ENST00000574428 ADAMTSL4-AS1Q5T5F5 129 aa15.67■□□□□ 0.1
ATPAF1-213ENST00000574428 Q8N814 137 aa15.67■□□□□ 0.1
ATPAF1-213ENST00000574428 A0A0U1RRA0 63 aa15.67■□□□□ 0.1
ATPAF1-213ENST00000574428 F8WDY8 70 aa15.67■□□□□ 0.1
ATPAF1-213ENST00000574428 TIMM17BO60830 172 aa15.67■□□□□ 0.1
ATPAF1-213ENST00000574428 CARD19Q96LW7 228 aa15.67■□□□□ 0.1
ATPAF1-213ENST00000574428 SPANXDQ9BXN6 97 aa15.67■□□□□ 0.1
ATPAF1-213ENST00000574428 SPANXCQ9NY87 97 aa15.67■□□□□ 0.1
ATPAF1-213ENST00000574428 FRAS1Q86XX4 4008 aa15.67■□□□□ 0.1
ATPAF1-213ENST00000574428 MUSTN1Q8IVN3 82 aa15.66■□□□□ 0.1
ATPAF1-213ENST00000574428 ERG28Q9UKR5 140 aa15.66■□□□□ 0.1
ATPAF1-213ENST00000574428 PFN2P35080 140 aa15.65■□□□□ 0.1
ATPAF1-213ENST00000574428 DNAH17Q9UFH2 4485 aa15.64■□□□□ 0.09
ATPAF1-213ENST00000574428 RYR2Q92736 4967 aa15.64■□□□□ 0.09
ATPAF1-213ENST00000574428 TRBV30A0A0K0K1B3 111 aa15.63■□□□□ 0.09
ATPAF1-213ENST00000574428 CNBPP62633 177 aaKnown RBP15.62■□□□□ 0.09
ATPAF1-213ENST00000574428 A4D1N5 150 aa15.62■□□□□ 0.09
ATPAF1-213ENST00000574428 LINC00158P58513 81 aa15.62■□□□□ 0.09
ATPAF1-213ENST00000574428 RPL24P83731 157 aaKnown RBP15.62■□□□□ 0.09
ATPAF1-213ENST00000574428 DAND5Q8N907 189 aa15.62■□□□□ 0.09
ATPAF1-213ENST00000574428 CIRBPQ14011 172 aaKnown RBP15.61■□□□□ 0.09
ATPAF1-213ENST00000574428 A0A1W2PPM0 123 aa15.6■□□□□ 0.09
ATPAF1-213ENST00000574428 CFC1BP0CG36 223 aa15.6■□□□□ 0.09
ATPAF1-213ENST00000574428 CFC1P0CG37 223 aa15.6■□□□□ 0.09
ATPAF1-213ENST00000574428 UBE2V1Q13404 147 aa15.6■□□□□ 0.09
ATPAF1-213ENST00000574428 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.58■□□□□ 0.08
ATPAF1-213ENST00000574428 FUSP35637 526 aaKnown RBP eCLIP15.58■□□□□ 0.08
ATPAF1-213ENST00000574428 NPC2P61916 151 aa15.57■□□□□ 0.08
ATPAF1-213ENST00000574428 COX17Q14061 63 aa15.57■□□□□ 0.08
ATPAF1-213ENST00000574428 EIF4EBP3O60516 100 aaPredicted RBP15.57■□□□□ 0.08
ATPAF1-213ENST00000574428 RNF151Q2KHN1 245 aa15.57■□□□□ 0.08
ATPAF1-213ENST00000574428 MIR7-3HGQ8N6C7 128 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms