RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 HBDP02042 147 aa17.32■□□□□ 0.36
SCARF1-207ENST00000573867 LINC00469Q8N7U9 141 aa17.32■□□□□ 0.36
SCARF1-207ENST00000573867 KRTAP29-1A8MX34 341 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-207ENST00000573867 C9orf116Q5BN46 136 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-207ENST00000573867 PDZD11Q5EBL8 140 aa17.31■□□□□ 0.36
SCARF1-207ENST00000573867 SMIM1B2RUZ4 78 aa17.3■□□□□ 0.36
SCARF1-207ENST00000573867 Q8IZM0 81 aa17.3■□□□□ 0.36
SCARF1-207ENST00000573867 TRBV30A0A0K0K1B3 111 aa17.29■□□□□ 0.36
SCARF1-207ENST00000573867 PACRGQ96M98 296 aaPredicted RBP17.29■□□□□ 0.36
SCARF1-207ENST00000573867 PRSS2P07478 247 aa17.28■□□□□ 0.36
SCARF1-207ENST00000573867 RAB5BP61020 215 aa17.28■□□□□ 0.36
SCARF1-207ENST00000573867 PRR3P79522 188 aaKnown RBP17.28■□□□□ 0.36
SCARF1-207ENST00000573867 FAM168BA1KXE4 195 aa17.26■□□□□ 0.35
SCARF1-207ENST00000573867 GAGE2EQ4V326 116 aa17.26■□□□□ 0.35
SCARF1-207ENST00000573867 C6orf226Q5I0X4 101 aa17.26■□□□□ 0.35
SCARF1-207ENST00000573867 GAGE2DQ9UEU5 116 aa17.26■□□□□ 0.35
SCARF1-207ENST00000573867 SPINK8P0C7L1 97 aa17.24■□□□□ 0.35
SCARF1-207ENST00000573867 CKS1BP61024 79 aa17.24■□□□□ 0.35
SCARF1-207ENST00000573867 J3QL48 77 aa17.23■□□□□ 0.35
SCARF1-207ENST00000573867 TRGC2P03986 189 aa17.23■□□□□ 0.35
SCARF1-207ENST00000573867 IGLC3P0DOY3 106 aa17.23■□□□□ 0.35
SCARF1-207ENST00000573867 NDUFA6P56556 154 aa17.23■□□□□ 0.35
SCARF1-207ENST00000573867 KRTAP7-1Q8IUC3 87 aa17.23■□□□□ 0.35
SCARF1-207ENST00000573867 NDUFC2-KCTD14E9PQ53 114 aa17.22■□□□□ 0.35
SCARF1-207ENST00000573867 PHF5AQ7RTV0 110 aaKnown RBP17.22■□□□□ 0.35
SCARF1-207ENST00000573867 CHCHD1Q96BP2 118 aaKnown RBP17.21■□□□□ 0.35
SCARF1-207ENST00000573867 ATP5LO75964 103 aa17.2■□□□□ 0.34
SCARF1-207ENST00000573867 C9orf129Q5T035 196 aaKnown RBP17.2■□□□□ 0.34
SCARF1-207ENST00000573867 COLCA2A8K830 154 aa17.19■□□□□ 0.34
SCARF1-207ENST00000573867 F8VRH5 84 aa17.19■□□□□ 0.34
SCARF1-207ENST00000573867 OXTP01178 125 aa17.19■□□□□ 0.34
SCARF1-207ENST00000573867 COX7B2Q8TF08 81 aa17.19■□□□□ 0.34
SCARF1-207ENST00000573867 ZNF22P17026 224 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-207ENST00000573867 FAM19A5Q7Z5A7 132 aaPredicted RBP17.17■□□□□ 0.34
SCARF1-207ENST00000573867 BAGE3Q86Y29 109 aa17.16■□□□□ 0.34
SCARF1-207ENST00000573867 CXCL5P42830 114 aa17.15■□□□□ 0.34
SCARF1-207ENST00000573867 LINC00310P59036 64 aa17.15■□□□□ 0.34
SCARF1-207ENST00000573867 KRTAP11-1Q8IUC1 163 aa17.15■□□□□ 0.34
SCARF1-207ENST00000573867 C11orf86A6NJI1 115 aa17.14■□□□□ 0.33
SCARF1-207ENST00000573867 FAM19A2Q8N3H0 131 aa17.14■□□□□ 0.33
SCARF1-207ENST00000573867 IGLV5-39A0A0G2JS06 123 aa17.13■□□□□ 0.33
SCARF1-207ENST00000573867 H3BRM9 83 aa17.13■□□□□ 0.33
SCARF1-207ENST00000573867 PSORS1C2Q9UIG4 136 aa17.13■□□□□ 0.33
SCARF1-207ENST00000573867 SCO1O75880 301 aa17.11■□□□□ 0.33
SCARF1-207ENST00000573867 XAGE1AQ9HD64 81 aa17.11■□□□□ 0.33
SCARF1-207ENST00000573867 IFI27L1Q96BM0 104 aa17.1■□□□□ 0.33
SCARF1-207ENST00000573867 HSBP1O75506 76 aa17.09■□□□□ 0.33
SCARF1-207ENST00000573867 SRSF9Q13242 221 aaKnown RBP eCLIP17.09■□□□□ 0.33
SCARF1-207ENST00000573867 SERF1AO75920 110 aa17.08■□□□□ 0.32
SCARF1-207ENST00000573867 SERTAD4-AS1Q5TG53 156 aa17.08■□□□□ 0.32
SCARF1-207ENST00000573867 CHTOPQ9Y3Y2 248 aaKnown RBP17.08■□□□□ 0.32
SCARF1-207ENST00000573867 M0QXV9 152 aa17.07■□□□□ 0.32
SCARF1-207ENST00000573867 MT1HL1P0DM35 61 aa17.07■□□□□ 0.32
SCARF1-207ENST00000573867 NUPR1O60356 82 aa17.06■□□□□ 0.32
SCARF1-207ENST00000573867 TRAV12-1A0A0B4J245 112 aa17.05■□□□□ 0.32
SCARF1-207ENST00000573867 TMEM170BQ5T4T1 132 aa17.05■□□□□ 0.32
SCARF1-207ENST00000573867 SPINK6Q6UWN8 80 aa17.03■□□□□ 0.32
SCARF1-207ENST00000573867 TNXBP22105 4242 aa17.03■□□□□ 0.32
SCARF1-207ENST00000573867 C1orf137Q5JT78 98 aa17.02■□□□□ 0.32
SCARF1-207ENST00000573867 C22orf24Q9Y442 160 aa16.99■□□□□ 0.31
SCARF1-207ENST00000573867 TMEM223A0PJW6 202 aa16.97■□□□□ 0.31
SCARF1-207ENST00000573867 LEPROTL1O95214 131 aa16.96■□□□□ 0.31
SCARF1-207ENST00000573867 UBE2BP63146 152 aa16.96■□□□□ 0.31
SCARF1-207ENST00000573867 ODF1Q14990 250 aa16.96■□□□□ 0.31
SCARF1-207ENST00000573867 H0Y8G0 127 aa16.94■□□□□ 0.3
SCARF1-207ENST00000573867 IGLV7-43P04211 117 aa16.94■□□□□ 0.3
SCARF1-207ENST00000573867 PFN2P35080 140 aa16.94■□□□□ 0.3
SCARF1-207ENST00000573867 ZNF625Q96I27 306 aaPredicted RBP16.94■□□□□ 0.3
SCARF1-207ENST00000573867 LINC01600Q96MT4 127 aa16.93■□□□□ 0.3
SCARF1-207ENST00000573867 ERG28Q9UKR5 140 aa16.92■□□□□ 0.3
SCARF1-207ENST00000573867 FABP4P15090 132 aa16.91■□□□□ 0.3
SCARF1-207ENST00000573867 PLA2G2DQ9UNK4 145 aa16.91■□□□□ 0.3
SCARF1-207ENST00000573867 HIST1H2BKO60814 126 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 HIST1H2BJP06899 126 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 HIST1H2BOP23527 126 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 HIST1H2BBP33778 126 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 HIST1H2BDP58876 126 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 HIST1H2BCP62807 126 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 HIST2H2BEQ16778 126 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-207ENST00000573867 HIST1H2BHQ93079 126 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 HIST1H2BNQ99877 126 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 HIST1H2BMQ99879 126 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 TP73-AS1Q9UF72 201 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 HMCN2Q8NDA2 5059 aa16.9■□□□□ 0.3
SCARF1-207ENST00000573867 REG3GQ6UW15 175 aa16.88■□□□□ 0.29
SCARF1-207ENST00000573867 MRPL55Q7Z7F7 128 aaKnown RBP16.88■□□□□ 0.29
SCARF1-207ENST00000573867 HSPB8Q9UJY1 196 aa16.88■□□□□ 0.29
SCARF1-207ENST00000573867 SND1-IT1Q9HBX3 110 aa16.87■□□□□ 0.29
SCARF1-207ENST00000573867 IGLV5-37A0A075B6J1 123 aa16.86■□□□□ 0.29
SCARF1-207ENST00000573867 LBHQ53QV2 105 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-207ENST00000573867 LINC00167Q96N53 147 aa16.85■□□□□ 0.29
SCARF1-207ENST00000573867 COX17Q14061 63 aa16.84■□□□□ 0.29
SCARF1-207ENST00000573867 SFTA2Q6UW10 78 aa16.84■□□□□ 0.29
SCARF1-207ENST00000573867 PMCHL2Q9BQD1 86 aa16.84■□□□□ 0.29
SCARF1-207ENST00000573867 Q8NDZ9 215 aa16.83■□□□□ 0.28
SCARF1-207ENST00000573867 GAGE10A6NGK3 116 aa16.82■□□□□ 0.28
SCARF1-207ENST00000573867 KRTAP10-8P60410 259 aa16.82■□□□□ 0.28
SCARF1-207ENST00000573867 RPL37AP8A6NKH3 93 aa16.81■□□□□ 0.28
SCARF1-207ENST00000573867 H0Y9J4 135 aa16.8■□□□□ 0.28
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