RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 PRB1P04280 392 aa8.85□□□□□ -0.99
PCDHGA9-201ENST00000573521 LINC00315P59091 139 aa8.85□□□□□ -0.99
PCDHGA9-201ENST00000573521 LINC00575Q6W349 94 aa8.85□□□□□ -0.99
PCDHGA9-201ENST00000573521 PRO0461Q9UI25 63 aa8.84□□□□□ -0.99
PCDHGA9-201ENST00000573521 CASC2Q6XLA1 102 aa8.84□□□□□ -0.99
PCDHGA9-201ENST00000573521 CSPG4Q6UVK1 2322 aa8.84□□□□□ -0.99
PCDHGA9-201ENST00000573521 SPTSSBQ8NFR3 76 aa8.84□□□□□ -0.99
PCDHGA9-201ENST00000573521 IGKV2-24A0A0C4DH68 120 aa8.84□□□□□ -1
PCDHGA9-201ENST00000573521 SCXQ7RTU7 201 aa8.84□□□□□ -1
PCDHGA9-201ENST00000573521 LOC100131303A0A0U1RQF7 123 aa8.83□□□□□ -1
PCDHGA9-201ENST00000573521 COX6A2Q02221 97 aa8.83□□□□□ -1
PCDHGA9-201ENST00000573521 MPLKIPQ8TAP9 179 aa8.83□□□□□ -1
PCDHGA9-201ENST00000573521 C7orf33Q8WU49 177 aa8.82□□□□□ -1
PCDHGA9-201ENST00000573521 C1orf137Q5JT78 98 aa8.82□□□□□ -1
PCDHGA9-201ENST00000573521 C3orf84H3BNL1 204 aa8.82□□□□□ -1
PCDHGA9-201ENST00000573521 FAM19A5Q7Z5A7 132 aaPredicted RBP8.82□□□□□ -1
PCDHGA9-201ENST00000573521 CACNA1AO00555 2505 aa8.82□□□□□ -1
PCDHGA9-201ENST00000573521 PRRC2CQ9Y520 2896 aaKnown RBP8.81□□□□□ -1
PCDHGA9-201ENST00000573521 RPL37AP8A6NKH3 93 aa8.81□□□□□ -1
PCDHGA9-201ENST00000573521 FREM2Q5SZK8 3169 aa8.81□□□□□ -1
PCDHGA9-201ENST00000573521 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.81□□□□□ -1
PCDHGA9-201ENST00000573521 A0A087WYN8 130 aa8.81□□□□□ -1
PCDHGA9-201ENST00000573521 UNQ6190/PRO20217Q6UXQ8 127 aa8.81□□□□□ -1
PCDHGA9-201ENST00000573521 SNURFQ9Y675 71 aa8.81□□□□□ -1
PCDHGA9-201ENST00000573521 AVPP01185 164 aa8.8□□□□□ -1
PCDHGA9-201ENST00000573521 ZNF843Q8N446 348 aa8.8□□□□□ -1
PCDHGA9-201ENST00000573521 TNRC18O15417 2968 aaPredicted RBP8.8□□□□□ -1
PCDHGA9-201ENST00000573521 WDFY3Q8IZQ1 3526 aa8.8□□□□□ -1
PCDHGA9-201ENST00000573521 hDV103S1A0JD37 113 aa8.8□□□□□ -1
PCDHGA9-201ENST00000573521 Q8N3U1 123 aa8.8□□□□□ -1
PCDHGA9-201ENST00000573521 C11orf72Q8NBR9 251 aa8.8□□□□□ -1
PCDHGA9-201ENST00000573521 C10orf25Q5T742 122 aa8.79□□□□□ -1
PCDHGA9-201ENST00000573521 C1orf195Q5TG92 126 aa8.79□□□□□ -1
PCDHGA9-201ENST00000573521 IGLV4-60A0A075B6I1 120 aa8.79□□□□□ -1
PCDHGA9-201ENST00000573521 IGHV3OR16-9A0A0B4J2B5 98 aa8.79□□□□□ -1
PCDHGA9-201ENST00000573521 SVIPQ8NHG7 77 aa8.79□□□□□ -1
PCDHGA9-201ENST00000573521 LINC00482Q8N8I6 264 aa8.78□□□□□ -1
PCDHGA9-201ENST00000573521 WFDC10BQ8IUB3 73 aa8.78□□□□□ -1
PCDHGA9-201ENST00000573521 Q6ZVQ6 151 aa8.78□□□□□ -1
PCDHGA9-201ENST00000573521 IGKV2-28A0A075B6P5 120 aa8.77□□□□□ -1.01
PCDHGA9-201ENST00000573521 IGKV2D-28P01615 120 aa8.77□□□□□ -1.01
PCDHGA9-201ENST00000573521 H3BNG1 76 aa8.77□□□□□ -1.01
PCDHGA9-201ENST00000573521 NAV2Q8IVL1 2488 aa8.77□□□□□ -1.01
PCDHGA9-201ENST00000573521 C18orf65Q6ZTR6 163 aa8.76□□□□□ -1.01
PCDHGA9-201ENST00000573521 LINC00846Q9NV44 126 aa8.76□□□□□ -1.01
PCDHGA9-201ENST00000573521 REG3GQ6UW15 175 aa8.76□□□□□ -1.01
PCDHGA9-201ENST00000573521 TMEM254Q8TBM7 123 aa8.76□□□□□ -1.01
PCDHGA9-201ENST00000573521 IGF2RP11717 2491 aa8.76□□□□□ -1.01
PCDHGA9-201ENST00000573521 H3BPC8 53 aa8.76□□□□□ -1.01
PCDHGA9-201ENST00000573521 LINC00337Q8N6G1 96 aa8.76□□□□□ -1.01
PCDHGA9-201ENST00000573521 DMDP11532 3685 aa8.76□□□□□ -1.01
PCDHGA9-201ENST00000573521 A6NED7 52 aa8.75□□□□□ -1.01
PCDHGA9-201ENST00000573521 SMCPP49901 116 aaPredicted RBP8.75□□□□□ -1.01
PCDHGA9-201ENST00000573521 MUC3AQ02505 3323 aa8.75□□□□□ -1.01
PCDHGA9-201ENST00000573521 IGHV4-30-4P0DP06 118 aa8.74□□□□□ -1.01
PCDHGA9-201ENST00000573521 LINC01547P58512 204 aaPredicted RBP8.74□□□□□ -1.01
PCDHGA9-201ENST00000573521 LOC110117498A0A087WWA1 95 aa8.74□□□□□ -1.01
PCDHGA9-201ENST00000573521 LY6G6DO95868 133 aa8.74□□□□□ -1.01
PCDHGA9-201ENST00000573521 WFDC13Q8IUB5 93 aa8.74□□□□□ -1.01
PCDHGA9-201ENST00000573521 INAFM1C9JVW0 142 aa8.73□□□□□ -1.01
PCDHGA9-201ENST00000573521 CDSNQ15517 529 aa8.73□□□□□ -1.01
PCDHGA9-201ENST00000573521 ARHGAP32A7KAX9 2087 aa8.73□□□□□ -1.01
PCDHGA9-201ENST00000573521 PLAC8L1A1L4L8 177 aa8.73□□□□□ -1.01
PCDHGA9-201ENST00000573521 Q6ZSN1 163 aa8.72□□□□□ -1.01
PCDHGA9-201ENST00000573521 SORL1Q92673 2214 aa8.72□□□□□ -1.01
PCDHGA9-201ENST00000573521 C2CD3Q4AC94 2353 aa8.72□□□□□ -1.01
PCDHGA9-201ENST00000573521 WFDC10AQ9H1F0 79 aa8.72□□□□□ -1.01
PCDHGA9-201ENST00000573521 CELA1Q9UNI1 258 aa8.72□□□□□ -1.01
PCDHGA9-201ENST00000573521 PCSK5Q92824 1860 aa8.71□□□□□ -1.01
PCDHGA9-201ENST00000573521 A0A087WVE0 104 aa8.71□□□□□ -1.01
PCDHGA9-201ENST00000573521 ESRGQ1W209 222 aa8.7□□□□□ -1.02
PCDHGA9-201ENST00000573521 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
PCDHGA9-201ENST00000573521 A0A1W2PPR1 153 aa8.69□□□□□ -1.02
PCDHGA9-201ENST00000573521 NUPR2A6NF83 97 aa8.69□□□□□ -1.02
PCDHGA9-201ENST00000573521 FHL3Q13643 280 aa8.69□□□□□ -1.02
PCDHGA9-201ENST00000573521 PRO0628Q9UI54 55 aa8.69□□□□□ -1.02
PCDHGA9-201ENST00000573521 HRCT1Q6UXD1 115 aa8.69□□□□□ -1.02
PCDHGA9-201ENST00000573521 LINC00208Q96KT6 92 aa8.69□□□□□ -1.02
PCDHGA9-201ENST00000573521 TP53AIP1Q9HCN2 124 aa8.69□□□□□ -1.02
PCDHGA9-201ENST00000573521 A8MTW9 85 aa8.68□□□□□ -1.02
PCDHGA9-201ENST00000573521 HCG22E2RYF7 251 aa8.68□□□□□ -1.02
PCDHGA9-201ENST00000573521 ERC2-IT1O76042 136 aa8.68□□□□□ -1.02
PCDHGA9-201ENST00000573521 FAM30AQ9NZY2 134 aa8.68□□□□□ -1.02
PCDHGA9-201ENST00000573521 PRB2P02812 416 aaPredicted RBP8.68□□□□□ -1.02
PCDHGA9-201ENST00000573521 EDN2P20800 178 aa8.68□□□□□ -1.02
PCDHGA9-201ENST00000573521 LYPD5Q6UWN5 251 aa8.68□□□□□ -1.02
PCDHGA9-201ENST00000573521 C6orf223Q8N319 242 aa8.68□□□□□ -1.02
PCDHGA9-201ENST00000573521 PRM2P04554 102 aa8.68□□□□□ -1.02
PCDHGA9-201ENST00000573521 PRRC2AP48634 2157 aaKnown RBP8.67□□□□□ -1.02
PCDHGA9-201ENST00000573521 GVQW2A0A096LPI5 108 aaPredicted RBP8.67□□□□□ -1.02
PCDHGA9-201ENST00000573521 RAI1Q7Z5J4 1906 aaPredicted RBP8.67□□□□□ -1.02
PCDHGA9-201ENST00000573521 TET2Q6N021 2002 aaPredicted RBP8.66□□□□□ -1.02
PCDHGA9-201ENST00000573521 TLN1Q9Y490 2541 aaKnown RBP8.66□□□□□ -1.02
PCDHGA9-201ENST00000573521 LINC01556Q5JQF7 62 aa8.66□□□□□ -1.02
PCDHGA9-201ENST00000573521 FRYQ5TBA9 3013 aa8.66□□□□□ -1.02
PCDHGA9-201ENST00000573521 A0A0J9YWU9 116 aa8.66□□□□□ -1.02
PCDHGA9-201ENST00000573521 A0A0U1RQV1 116 aa8.66□□□□□ -1.02
PCDHGA9-201ENST00000573521 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.03
PCDHGA9-201ENST00000573521 A0A096LNI7 61 aa8.64□□□□□ -1.03
PCDHGA9-201ENST00000573521 PLA2G2AP14555 144 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms