RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 LCE1EQ5T753 118 aa2.58□□□□□ -2
TOPBP1-210ENST00000572787 Q6ZRN7 208 aaPredicted RBP2.58□□□□□ -2
TOPBP1-210ENST00000572787 ATRXP46100 2492 aa2.58□□□□□ -2
TOPBP1-210ENST00000572787 ZMYM4Q5VZL5 1548 aa2.58□□□□□ -2
TOPBP1-210ENST00000572787 SAMD9Q5K651 1589 aa2.57□□□□□ -2
TOPBP1-210ENST00000572787 RICTORQ6R327 1708 aa2.57□□□□□ -2
TOPBP1-210ENST00000572787 TRAV21A0A0B4J279 112 aa2.57□□□□□ -2
TOPBP1-210ENST00000572787 TRBV30A0A0K0K1B3 111 aa2.57□□□□□ -2
TOPBP1-210ENST00000572787 C10orf113Q5VZT2 155 aa2.57□□□□□ -2
TOPBP1-210ENST00000572787 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
TOPBP1-210ENST00000572787 LINC00472Q9H8W2 130 aa2.57□□□□□ -2
TOPBP1-210ENST00000572787 COL14A1Q05707 1796 aaKnown RBP2.56□□□□□ -2
TOPBP1-210ENST00000572787 TET1Q8NFU7 2136 aa2.56□□□□□ -2
TOPBP1-210ENST00000572787 ABCA4P78363 2273 aa2.56□□□□□ -2
TOPBP1-210ENST00000572787 GPR179Q6PRD1 2367 aa2.56□□□□□ -2
TOPBP1-210ENST00000572787 HCRTO43612 131 aa2.56□□□□□ -2
TOPBP1-210ENST00000572787 GAS8-AS1O95177 125 aa2.56□□□□□ -2
TOPBP1-210ENST00000572787 ZNF236Q9UL36 1845 aa2.56□□□□□ -2
TOPBP1-210ENST00000572787 UBR3Q6ZT12 1888 aa2.56□□□□□ -2
TOPBP1-210ENST00000572787 BCORQ6W2J9 1755 aa2.55□□□□□ -2
TOPBP1-210ENST00000572787 CCL19Q99731 98 aa2.55□□□□□ -2
TOPBP1-210ENST00000572787 PRRC2AP48634 2157 aaKnown RBP2.54□□□□□ -2
TOPBP1-210ENST00000572787 ABCA5Q8WWZ7 1642 aa2.54□□□□□ -2
TOPBP1-210ENST00000572787 KIAA0586Q9BVV6 1533 aa2.54□□□□□ -2
TOPBP1-210ENST00000572787 TRBV6-1A0A0K0K1D8 114 aa2.54□□□□□ -2
TOPBP1-210ENST00000572787 LCE6AA0A183 80 aa2.54□□□□□ -2
TOPBP1-210ENST00000572787 J3QRE1 110 aa2.54□□□□□ -2
TOPBP1-210ENST00000572787 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
TOPBP1-210ENST00000572787 ALPK2Q86TB3 2170 aa2.54□□□□□ -2
TOPBP1-210ENST00000572787 ZNF831Q5JPB2 1677 aa2.53□□□□□ -2
TOPBP1-210ENST00000572787 ADCY10Q96PN6 1610 aa2.53□□□□□ -2
TOPBP1-210ENST00000572787 ERCC6L2Q5T890 1561 aa2.53□□□□□ -2
TOPBP1-210ENST00000572787 C10orf99Q6UWK7 81 aa2.53□□□□□ -2
TOPBP1-210ENST00000572787 PP632Q6XCG6 107 aa2.53□□□□□ -2
TOPBP1-210ENST00000572787 WFDC9Q8NEX5 89 aa2.53□□□□□ -2
TOPBP1-210ENST00000572787 LRRC37A2A6NM11 1700 aa2.53□□□□□ -2
TOPBP1-210ENST00000572787 EFCAB6Q5THR3 1501 aa2.52□□□□□ -2.01
TOPBP1-210ENST00000572787 TOMM5Q8N4H5 51 aa2.52□□□□□ -2.01
TOPBP1-210ENST00000572787 GAFA1Q96PS6 74 aa2.52□□□□□ -2.01
TOPBP1-210ENST00000572787 MDC1Q14676 2089 aaKnown RBP2.52□□□□□ -2.01
TOPBP1-210ENST00000572787 FMN2Q9NZ56 1722 aa2.51□□□□□ -2.01
TOPBP1-210ENST00000572787 KRTAP10-8P60410 259 aa2.51□□□□□ -2.01
TOPBP1-210ENST00000572787 DEFB112Q30KQ8 113 aa2.51□□□□□ -2.01
TOPBP1-210ENST00000572787 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.51□□□□□ -2.01
TOPBP1-210ENST00000572787 ZCCHC13Q8WW36 166 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-210ENST00000572787 DOCK10Q96BY6 2186 aa2.51□□□□□ -2.01
TOPBP1-210ENST00000572787 C3P01024 1663 aa2.5□□□□□ -2.01
TOPBP1-210ENST00000572787 SHANK1Q9Y566 2161 aa2.5□□□□□ -2.01
TOPBP1-210ENST00000572787 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
TOPBP1-210ENST00000572787 IQGAP2Q13576 1575 aa2.49□□□□□ -2.01
TOPBP1-210ENST00000572787 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
TOPBP1-210ENST00000572787 NCBP2-AS2Q69YL0 99 aa2.49□□□□□ -2.01
TOPBP1-210ENST00000572787 SMIM11BQ8TCY0 68 aa2.49□□□□□ -2.01
TOPBP1-210ENST00000572787 UBL5Q9BZL1 73 aa2.49□□□□□ -2.01
TOPBP1-210ENST00000572787 RTTNQ86VV8 2226 aa2.49□□□□□ -2.01
TOPBP1-210ENST00000572787 MYO7AQ13402 2215 aa2.48□□□□□ -2.01
TOPBP1-210ENST00000572787 A0A1B0GU69 56 aa2.48□□□□□ -2.01
TOPBP1-210ENST00000572787 NCR3O14931 201 aa2.48□□□□□ -2.01
TOPBP1-210ENST00000572787 PRH1P02810 166 aa2.48□□□□□ -2.01
TOPBP1-210ENST00000572787 OBSCN-AS1Q96MR7 158 aa2.48□□□□□ -2.01
TOPBP1-210ENST00000572787 LY75O60449 1722 aa2.48□□□□□ -2.01
TOPBP1-210ENST00000572787 POLR1AO95602 1720 aaPredicted RBP2.48□□□□□ -2.01
TOPBP1-210ENST00000572787 DNAJC13O75165 2243 aa2.48□□□□□ -2.01
TOPBP1-210ENST00000572787 PAPPA2Q9BXP8 1791 aa2.47□□□□□ -2.01
TOPBP1-210ENST00000572787 FCER1GP30273 86 aa2.47□□□□□ -2.01
TOPBP1-210ENST00000572787 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
TOPBP1-210ENST00000572787 ENHOQ6UWT2 76 aa2.47□□□□□ -2.01
TOPBP1-210ENST00000572787 TJP1Q07157 1748 aa2.47□□□□□ -2.01
TOPBP1-210ENST00000572787 NRAPQ86VF7 1730 aa2.47□□□□□ -2.01
TOPBP1-210ENST00000572787 KMT2BQ9UMN6 2715 aaPredicted RBP2.47□□□□□ -2.01
TOPBP1-210ENST00000572787 ANKRD36CQ5JPF3 1778 aa2.46□□□□□ -2.02
TOPBP1-210ENST00000572787 A0A096LNT2 108 aa2.46□□□□□ -2.02
TOPBP1-210ENST00000572787 UNQ6190/PRO20217Q6UXQ8 127 aa2.46□□□□□ -2.02
TOPBP1-210ENST00000572787 Q6ZRX8 168 aa2.46□□□□□ -2.02
TOPBP1-210ENST00000572787 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
TOPBP1-210ENST00000572787 NMES1Q9C002 83 aa2.46□□□□□ -2.02
TOPBP1-210ENST00000572787 FN1P02751 2386 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-210ENST00000572787 PIN1P1O15428 100 aa2.45□□□□□ -2.02
TOPBP1-210ENST00000572787 CMC2Q9NRP2 79 aa2.45□□□□□ -2.02
TOPBP1-210ENST00000572787 AGLP35573 1532 aa2.45□□□□□ -2.02
TOPBP1-210ENST00000572787 SDK1Q7Z5N4 2213 aa2.45□□□□□ -2.02
TOPBP1-210ENST00000572787 FREM1Q5H8C1 2179 aa2.44□□□□□ -2.02
TOPBP1-210ENST00000572787 GVQW2A0A096LPI5 108 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-210ENST00000572787 LINC00959A0A1B0GUT2 108 aa2.44□□□□□ -2.02
TOPBP1-210ENST00000572787 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
TOPBP1-210ENST00000572787 SLIT1O75093 1534 aa2.43□□□□□ -2.02
TOPBP1-210ENST00000572787 NRXN3Q9Y4C0 1643 aa2.43□□□□□ -2.02
TOPBP1-210ENST00000572787 G3V318 75 aa2.43□□□□□ -2.02
TOPBP1-210ENST00000572787 SPINK13Q1W4C9 94 aa2.43□□□□□ -2.02
TOPBP1-210ENST00000572787 LINC00575Q6W349 94 aa2.43□□□□□ -2.02
TOPBP1-210ENST00000572787 NCOA6Q14686 2063 aaPredicted RBP2.43□□□□□ -2.02
TOPBP1-210ENST00000572787 DOT1LQ8TEK3 1739 aa2.42□□□□□ -2.02
TOPBP1-210ENST00000572787 INTS1Q8N201 2190 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-210ENST00000572787 ABCC8Q09428 1581 aa2.42□□□□□ -2.02
TOPBP1-210ENST00000572787 COX7BP24311 80 aa2.42□□□□□ -2.02
TOPBP1-210ENST00000572787 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
TOPBP1-210ENST00000572787 HAMPP81172 84 aa2.42□□□□□ -2.02
TOPBP1-210ENST00000572787 A0A0G2JMZ2 1700 aa2.42□□□□□ -2.02
TOPBP1-210ENST00000572787 NDUFA4O00483 81 aa2.41□□□□□ -2.02
TOPBP1-210ENST00000572787 E9PCH4 1651 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms