RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SDHAF1A6NFY7 115 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 C9JQL5 133 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 APCSP02743 223 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 FCER1GP30273 86 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 CKS2P33552 79 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 HBBP68871 147 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 OCIAD2Q56VL3 154 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 Q6ZRN7 208 aaPredicted RBP2.44□□□□□ -2.02
NUP88-202ENST00000570937 ATP5L2Q7Z4Y8 100 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 GATD1Q8NB37 220 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 C7orf33Q8WU49 177 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 UBE2WQ96B02 151 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 TMEM101Q96IK0 257 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 IMMP2LQ96T52 175 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 C20orf78Q9BR46 151 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 DNAH6Q9C0G6 4158 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 TRBV27A0A0K0K1C4 114 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 RAB5AP20339 215 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 REG3AQ06141 175 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 MPV17L2Q567V2 206 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 FAM104BQ5XKR9 115 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 RNASEKQ6P5S7 137 aaKnown RBP2.43□□□□□ -2.02
NUP88-202ENST00000570937 NTM-AS1Q6ZSK4 140 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 AMN1Q8IY45 258 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 LINC00269Q8N2A0 174 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 Q8N814 137 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 CST9LQ9H4G1 147 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 SPANXCQ9NY87 97 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 DNAH10Q8IVF4 4471 aa2.43□□□□□ -2.02
NUP88-202ENST00000570937 DNAH2Q9P225 4427 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 TRBV24-1A0A075B6N3 115 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 TRAV9-1A0A075B6T8 112 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 LRCOL1A6NCL2 159 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 CCL25O15444 150 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 HLA-DQA1P01909 254 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 FGF6P10767 208 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 MRPL54Q6P161 138 aaKnown RBP2.42□□□□□ -2.02
NUP88-202ENST00000570937 ENHOQ6UWT2 76 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 ORMDL3Q8N138 153 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 ZNF664Q8N3J9 261 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 OR5A1Q8NGJ0 315 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 BAALCQ8WXS3 180 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 RPL39LQ96EH5 51 aaKnown RBP2.42□□□□□ -2.02
NUP88-202ENST00000570937 RNF185Q96GF1 192 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 TMEM70Q9BUB7 260 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 TMEM242Q9NWH2 141 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 LAMTOR2Q9Y2Q5 125 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 DNAH17Q9UFH2 4485 aa2.42□□□□□ -2.02
NUP88-202ENST00000570937 FRAS1Q86XX4 4008 aa2.41□□□□□ -2.02
NUP88-202ENST00000570937 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.41□□□□□ -2.02
NUP88-202ENST00000570937 C7orf77A4D0Y5 90 aa2.41□□□□□ -2.02
NUP88-202ENST00000570937 D6R8Y8 96 aa2.41□□□□□ -2.02
NUP88-202ENST00000570937 K7EMI3 77 aa2.41□□□□□ -2.02
NUP88-202ENST00000570937 RPS10P46783 165 aaKnown RBP2.41□□□□□ -2.02
NUP88-202ENST00000570937 POLR2KP53803 58 aaKnown RBP2.41□□□□□ -2.02
NUP88-202ENST00000570937 CKS1BP61024 79 aa2.41□□□□□ -2.02
NUP88-202ENST00000570937 RHEBQ15382 184 aa2.41□□□□□ -2.02
NUP88-202ENST00000570937 SS18Q15532 418 aa2.41□□□□□ -2.02
NUP88-202ENST00000570937 MRPL51Q4U2R6 128 aaKnown RBP2.41□□□□□ -2.02
NUP88-202ENST00000570937 COA6Q5JTJ3 125 aaKnown RBP2.41□□□□□ -2.02
NUP88-202ENST00000570937 TMEM136Q6ZRR5 245 aa2.41□□□□□ -2.02
NUP88-202ENST00000570937 BOD1L2Q8IYS8 172 aa2.41□□□□□ -2.02
NUP88-202ENST00000570937 PRELID3AQ96N28 172 aa2.41□□□□□ -2.02
NUP88-202ENST00000570937 CSDC2Q9Y534 153 aaKnown RBP2.41□□□□□ -2.02
NUP88-202ENST00000570937 RYR1P21817 5038 aa2.4□□□□□ -2.02
NUP88-202ENST00000570937 FAT2Q9NYQ8 4349 aa2.4□□□□□ -2.02
NUP88-202ENST00000570937 HERC2O95714 4834 aa2.4□□□□□ -2.02
NUP88-202ENST00000570937 IGLV4-60A0A075B6I1 120 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 IGLV10-54A0A075B6I4 117 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.4□□□□□ -2.03
NUP88-202ENST00000570937 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.4□□□□□ -2.03
NUP88-202ENST00000570937 IGKV3OR2-268A0A0C4DH90 116 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 A0A1B0GXF2 115 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 IGKV2-29A2NJV5 120 aaPredicted RBP2.4□□□□□ -2.03
NUP88-202ENST00000570937 SMKR1H3BMG3 65 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 LECT2O14960 151 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 ESDP10768 282 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 IFI27P40305 119 aaPredicted RBP2.4□□□□□ -2.03
NUP88-202ENST00000570937 PDZD11Q5EBL8 140 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 CLPSL2Q6UWE3 100 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 CBLN2Q8IUK8 224 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 HIST3H2BBQ8N257 126 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 C20orf203Q8NBC4 194 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 OR10D4PQ8NGN7 298 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 DEFB104AQ8WTQ1 72 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 SIGMAR1Q99720 223 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 MIEN1Q9BRT3 115 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 TIMM21Q9BVV7 248 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 SMIM2Q9BVW6 85 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 MAP1LC3AQ9H492 121 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 NXT2Q9NPJ8 142 aaKnown RBP2.4□□□□□ -2.03
NUP88-202ENST00000570937 CDC42SE2Q9NRR3 84 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 PKIGQ9Y2B9 76 aa2.4□□□□□ -2.03
NUP88-202ENST00000570937 PKD1P98161 4303 aa2.39□□□□□ -2.03
NUP88-202ENST00000570937 PKHD1P08F94 4074 aa2.39□□□□□ -2.03
NUP88-202ENST00000570937 LOC389332A0A1B0GUA5 103 aa2.39□□□□□ -2.03
NUP88-202ENST00000570937 LINC00959A0A1B0GUT2 108 aa2.39□□□□□ -2.03
NUP88-202ENST00000570937 LINC01549A6NIU2 74 aa2.39□□□□□ -2.03
NUP88-202ENST00000570937 M0QXV9 152 aa2.39□□□□□ -2.03
NUP88-202ENST00000570937 NPYP01303 97 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms