RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 HERV-K104P63124 156 aa11.93□□□□□ -0.5
SPNS2-202ENST00000570641 C14orf177Q52M58 125 aa11.93□□□□□ -0.5
SPNS2-202ENST00000570641 UQCR10Q9UDW1 63 aa11.93□□□□□ -0.5
SPNS2-202ENST00000570641 DNAH6Q9C0G6 4158 aa11.92□□□□□ -0.5
SPNS2-202ENST00000570641 NTN5Q8WTR8 489 aaPredicted RBP11.92□□□□□ -0.5
SPNS2-202ENST00000570641 ZNF625Q96I27 306 aaPredicted RBP11.92□□□□□ -0.5
SPNS2-202ENST00000570641 C2orf48Q96LS8 159 aa11.92□□□□□ -0.5
SPNS2-202ENST00000570641 KRTAP17-1Q9BYP8 105 aa11.92□□□□□ -0.5
SPNS2-202ENST00000570641 LECT2O14960 151 aa11.91□□□□□ -0.5
SPNS2-202ENST00000570641 LINC00526Q96FQ7 95 aa11.9□□□□□ -0.5
SPNS2-202ENST00000570641 CAMK2N2Q96S95 79 aa11.9□□□□□ -0.5
SPNS2-202ENST00000570641 MIEN1Q9BRT3 115 aa11.9□□□□□ -0.5
SPNS2-202ENST00000570641 LRCOL1A6NCL2 159 aa11.89□□□□□ -0.51
SPNS2-202ENST00000570641 C2orf82Q6UX34 121 aa11.89□□□□□ -0.51
SPNS2-202ENST00000570641 SCGB1D4Q6XE38 83 aa11.89□□□□□ -0.51
SPNS2-202ENST00000570641 WFDC2Q14508 124 aa11.88□□□□□ -0.51
SPNS2-202ENST00000570641 A0A0J9YXY3 114 aa11.87□□□□□ -0.51
SPNS2-202ENST00000570641 TP73-AS1Q9UF72 201 aa11.87□□□□□ -0.51
SPNS2-202ENST00000570641 LINC00587B1AMM8 73 aa11.86□□□□□ -0.51
SPNS2-202ENST00000570641 SYCNQ0VAF6 134 aa11.86□□□□□ -0.51
SPNS2-202ENST00000570641 MEIG1Q5JSS6 88 aa11.86□□□□□ -0.51
SPNS2-202ENST00000570641 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
SPNS2-202ENST00000570641 A0A087WTM6 91 aa11.85□□□□□ -0.51
SPNS2-202ENST00000570641 CIRBPQ14011 172 aaKnown RBP11.85□□□□□ -0.51
SPNS2-202ENST00000570641 HIGD1BQ9P298 99 aa11.85□□□□□ -0.51
SPNS2-202ENST00000570641 TRBV30A0A0K0K1B3 111 aa11.84□□□□□ -0.51
SPNS2-202ENST00000570641 TIMM17BO60830 172 aa11.84□□□□□ -0.51
SPNS2-202ENST00000570641 HNRNPA3P51991 378 aaKnown RBP11.84□□□□□ -0.51
SPNS2-202ENST00000570641 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
SPNS2-202ENST00000570641 Q6ZRU5 148 aa11.84□□□□□ -0.51
SPNS2-202ENST00000570641 C2orf91Q6ZV80 131 aa11.83□□□□□ -0.52
SPNS2-202ENST00000570641 CARD19Q96LW7 228 aa11.83□□□□□ -0.52
SPNS2-202ENST00000570641 ERG28Q9UKR5 140 aa11.83□□□□□ -0.52
SPNS2-202ENST00000570641 TMEM238C9JI98 176 aa11.82□□□□□ -0.52
SPNS2-202ENST00000570641 EREGO14944 169 aa11.82□□□□□ -0.52
SPNS2-202ENST00000570641 RTL8CO15255 209 aa11.82□□□□□ -0.52
SPNS2-202ENST00000570641 RNF151Q2KHN1 245 aa11.82□□□□□ -0.52
SPNS2-202ENST00000570641 Q8N814 137 aa11.82□□□□□ -0.52
SPNS2-202ENST00000570641 C6orf48Q9UBA6 75 aa11.82□□□□□ -0.52
SPNS2-202ENST00000570641 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.81□□□□□ -0.52
SPNS2-202ENST00000570641 COX17Q14061 63 aa11.81□□□□□ -0.52
SPNS2-202ENST00000570641 SLPIP03973 132 aa11.8□□□□□ -0.52
SPNS2-202ENST00000570641 SMIM13P0DJ93 91 aa11.8□□□□□ -0.52
SPNS2-202ENST00000570641 LINC00158P58513 81 aa11.8□□□□□ -0.52
SPNS2-202ENST00000570641 CNBPP62633 177 aaKnown RBP11.8□□□□□ -0.52
SPNS2-202ENST00000570641 SPANXB1Q9NS25 103 aaPredicted RBP11.8□□□□□ -0.52
SPNS2-202ENST00000570641 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.79□□□□□ -0.52
SPNS2-202ENST00000570641 DDTP30046 118 aa11.79□□□□□ -0.52
SPNS2-202ENST00000570641 PFN2P35080 140 aa11.79□□□□□ -0.52
SPNS2-202ENST00000570641 A0A0U1RRA0 63 aa11.78□□□□□ -0.52
SPNS2-202ENST00000570641 TNP2Q05952 138 aa11.78□□□□□ -0.52
SPNS2-202ENST00000570641 C9orf116Q5BN46 136 aaPredicted RBP11.78□□□□□ -0.52
SPNS2-202ENST00000570641 LITAFQ99732 161 aa11.78□□□□□ -0.52
SPNS2-202ENST00000570641 SPANXDQ9BXN6 97 aa11.78□□□□□ -0.52
SPNS2-202ENST00000570641 SPANXCQ9NY87 97 aa11.78□□□□□ -0.52
SPNS2-202ENST00000570641 KMT2AQ03164 3969 aa11.77□□□□□ -0.52
SPNS2-202ENST00000570641 SRSF9Q13242 221 aaKnown RBP eCLIP11.77□□□□□ -0.53
SPNS2-202ENST00000570641 Q6ZVH6 145 aa11.77□□□□□ -0.53
SPNS2-202ENST00000570641 HYDINQ4G0P3 5121 aa11.76□□□□□ -0.53
SPNS2-202ENST00000570641 TAL2Q16559 108 aa11.76□□□□□ -0.53
SPNS2-202ENST00000570641 HIST1H4GQ99525 98 aa11.76□□□□□ -0.53
SPNS2-202ENST00000570641 PCP4L1A6NKN8 68 aa11.75□□□□□ -0.53
SPNS2-202ENST00000570641 HSD52Q0P140 79 aa11.75□□□□□ -0.53
SPNS2-202ENST00000570641 ADAMTSL4-AS1Q5T5F5 129 aa11.75□□□□□ -0.53
SPNS2-202ENST00000570641 MIR7-3HGQ8N6C7 128 aa11.75□□□□□ -0.53
SPNS2-202ENST00000570641 TLX1NBP0CAT3 122 aa11.74□□□□□ -0.53
SPNS2-202ENST00000570641 GCSHP23434 173 aa11.74□□□□□ -0.53
SPNS2-202ENST00000570641 LINC00336Q6ZUF6 198 aa11.74□□□□□ -0.53
SPNS2-202ENST00000570641 COPS9Q8WXC6 57 aa11.74□□□□□ -0.53
SPNS2-202ENST00000570641 NDUFC2-KCTD14E9PQ53 114 aa11.73□□□□□ -0.53
SPNS2-202ENST00000570641 IFITM1P13164 125 aa11.73□□□□□ -0.53
SPNS2-202ENST00000570641 CTAG1AP78358 180 aa11.73□□□□□ -0.53
SPNS2-202ENST00000570641 DAND5Q8N907 189 aa11.73□□□□□ -0.53
SPNS2-202ENST00000570641 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
SPNS2-202ENST00000570641 LOC107984640A0A0U1RRK4 108 aa11.72□□□□□ -0.53
SPNS2-202ENST00000570641 C9orf163Q8N9P6 203 aa11.72□□□□□ -0.53
SPNS2-202ENST00000570641 DNAH10Q8IVF4 4471 aa11.7□□□□□ -0.54
SPNS2-202ENST00000570641 PTTG1IPP53801 180 aa11.7□□□□□ -0.54
SPNS2-202ENST00000570641 LINC00308Q8TCZ7 52 aa11.7□□□□□ -0.54
SPNS2-202ENST00000570641 RPL18AQ02543 176 aaKnown RBP11.69□□□□□ -0.54
SPNS2-202ENST00000570641 MUSTN1Q8IVN3 82 aa11.69□□□□□ -0.54
SPNS2-202ENST00000570641 CEND1Q8N111 149 aa11.69□□□□□ -0.54
SPNS2-202ENST00000570641 PPDPFQ9H3Y8 114 aa11.69□□□□□ -0.54
SPNS2-202ENST00000570641 SND1-IT1Q9HBX3 110 aa11.69□□□□□ -0.54
SPNS2-202ENST00000570641 M0R143 59 aa11.68□□□□□ -0.54
SPNS2-202ENST00000570641 NPC2P61916 151 aa11.68□□□□□ -0.54
SPNS2-202ENST00000570641 IGLV5-52A0A0A0MRZ9 124 aa11.67□□□□□ -0.54
SPNS2-202ENST00000570641 RPL24P83731 157 aaKnown RBP11.67□□□□□ -0.54
SPNS2-202ENST00000570641 Q6ZRP5 223 aa11.67□□□□□ -0.54
SPNS2-202ENST00000570641 DNAH2Q9P225 4427 aa11.67□□□□□ -0.54
SPNS2-202ENST00000570641 LOC107984156A0A0G2JMH3 177 aa11.66□□□□□ -0.54
SPNS2-202ENST00000570641 GAGE2EQ4V326 116 aa11.66□□□□□ -0.54
SPNS2-202ENST00000570641 SOSTDC1Q6X4U4 206 aa11.66□□□□□ -0.54
SPNS2-202ENST00000570641 ARL17AQ8IVW1 177 aa11.66□□□□□ -0.54
SPNS2-202ENST00000570641 GAGE2DQ9UEU5 116 aa11.66□□□□□ -0.54
SPNS2-202ENST00000570641 TMEM238LA0A1B0GVL6 79 aa11.65□□□□□ -0.54
SPNS2-202ENST00000570641 A6NJY4 79 aa11.65□□□□□ -0.54
SPNS2-202ENST00000570641 HINT1P49773 126 aaPredicted RBP11.65□□□□□ -0.54
SPNS2-202ENST00000570641 GAGE2BQ13066 116 aa11.65□□□□□ -0.54
SPNS2-202ENST00000570641 PGPEP1Q9NXJ5 209 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms