RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 HERVK_113P63121 156 aa6.12□□□□□ -1.43
HCCAT5-201ENST00000569990 PMVKQ15126 192 aa6.12□□□□□ -1.43
HCCAT5-201ENST00000569990 PDZD11Q5EBL8 140 aa6.12□□□□□ -1.43
HCCAT5-201ENST00000569990 Q6ZRU5 148 aa6.12□□□□□ -1.43
HCCAT5-201ENST00000569990 CHCHD1Q96BP2 118 aaKnown RBP6.12□□□□□ -1.43
HCCAT5-201ENST00000569990 CAMK2N2Q96S95 79 aa6.12□□□□□ -1.43
HCCAT5-201ENST00000569990 CST9LQ9H4G1 147 aa6.12□□□□□ -1.43
HCCAT5-201ENST00000569990 KIAA0087Q14695 138 aa6.11□□□□□ -1.43
HCCAT5-201ENST00000569990 Q5VSD8 79 aa6.11□□□□□ -1.43
HCCAT5-201ENST00000569990 SPACA4Q8TDM5 124 aa6.11□□□□□ -1.43
HCCAT5-201ENST00000569990 GEMIN7Q9H840 131 aaKnown RBP6.11□□□□□ -1.43
HCCAT5-201ENST00000569990 CDKN2A-AS1Q9UH64 79 aa6.11□□□□□ -1.43
HCCAT5-201ENST00000569990 A0A096LNI7 61 aa6.1□□□□□ -1.43
HCCAT5-201ENST00000569990 TINCRA0A1B0GVN0 87 aa6.1□□□□□ -1.43
HCCAT5-201ENST00000569990 F8WDY8 70 aa6.1□□□□□ -1.43
HCCAT5-201ENST00000569990 ATP5LO75964 103 aa6.1□□□□□ -1.43
HCCAT5-201ENST00000569990 BAGE3Q86Y29 109 aa6.1□□□□□ -1.43
HCCAT5-201ENST00000569990 MRPL35Q9NZE8 188 aaKnown RBP6.1□□□□□ -1.43
HCCAT5-201ENST00000569990 PKIGQ9Y2B9 76 aa6.1□□□□□ -1.43
HCCAT5-201ENST00000569990 IGLV5-45A0A087WSX0 123 aa6.09□□□□□ -1.43
HCCAT5-201ENST00000569990 A0A087WYN8 130 aa6.09□□□□□ -1.43
HCCAT5-201ENST00000569990 IGKV2-24A0A0C4DH68 120 aa6.09□□□□□ -1.43
HCCAT5-201ENST00000569990 NDUFA1O15239 70 aa6.09□□□□□ -1.43
HCCAT5-201ENST00000569990 HSBP1O75506 76 aa6.09□□□□□ -1.43
HCCAT5-201ENST00000569990 LINC00310P59036 64 aa6.09□□□□□ -1.43
HCCAT5-201ENST00000569990 RNF151Q2KHN1 245 aa6.09□□□□□ -1.43
HCCAT5-201ENST00000569990 LBHQ53QV2 105 aaPredicted RBP6.09□□□□□ -1.43
HCCAT5-201ENST00000569990 C10orf25Q5T742 122 aa6.09□□□□□ -1.43
HCCAT5-201ENST00000569990 LOC107984640A0A0U1RRK4 108 aa6.08□□□□□ -1.44
HCCAT5-201ENST00000569990 EIF4EBP3O60516 100 aaPredicted RBP6.08□□□□□ -1.44
HCCAT5-201ENST00000569990 NDUFA6P56556 154 aa6.08□□□□□ -1.44
HCCAT5-201ENST00000569990 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
HCCAT5-201ENST00000569990 UNQ6190/PRO20217Q6UXQ8 127 aa6.08□□□□□ -1.44
HCCAT5-201ENST00000569990 DPH3Q96FX2 82 aa6.08□□□□□ -1.44
HCCAT5-201ENST00000569990 PACRGQ96M98 296 aaPredicted RBP6.08□□□□□ -1.44
HCCAT5-201ENST00000569990 C12orf57Q99622 126 aa6.08□□□□□ -1.44
HCCAT5-201ENST00000569990 PLAC8Q9NZF1 115 aa6.08□□□□□ -1.44
HCCAT5-201ENST00000569990 SMIM1B2RUZ4 78 aa6.07□□□□□ -1.44
HCCAT5-201ENST00000569990 SERF1AO75920 110 aa6.07□□□□□ -1.44
HCCAT5-201ENST00000569990 IGLC3P0DOY3 106 aa6.07□□□□□ -1.44
HCCAT5-201ENST00000569990 PTTG1IPP53801 180 aa6.07□□□□□ -1.44
HCCAT5-201ENST00000569990 C2orf82Q6UX34 121 aa6.07□□□□□ -1.44
HCCAT5-201ENST00000569990 Q8IZM0 81 aa6.07□□□□□ -1.44
HCCAT5-201ENST00000569990 FAM19A2Q8N3H0 131 aa6.07□□□□□ -1.44
HCCAT5-201ENST00000569990 IFI27L1Q96BM0 104 aa6.07□□□□□ -1.44
HCCAT5-201ENST00000569990 TOMM7Q9P0U1 55 aa6.07□□□□□ -1.44
HCCAT5-201ENST00000569990 LINC00474Q9P2X8 69 aa6.07□□□□□ -1.44
HCCAT5-201ENST00000569990 C6orf48Q9UBA6 75 aa6.07□□□□□ -1.44
HCCAT5-201ENST00000569990 SRRM2Q9UQ35 2752 aaKnown RBP6.06□□□□□ -1.44
HCCAT5-201ENST00000569990 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
HCCAT5-201ENST00000569990 PRSS2P07478 247 aa6.06□□□□□ -1.44
HCCAT5-201ENST00000569990 GAGE2BQ13066 116 aa6.06□□□□□ -1.44
HCCAT5-201ENST00000569990 ODF1Q14990 250 aa6.06□□□□□ -1.44
HCCAT5-201ENST00000569990 C6orf226Q5I0X4 101 aa6.06□□□□□ -1.44
HCCAT5-201ENST00000569990 STPG4Q8N801 248 aa6.06□□□□□ -1.44
HCCAT5-201ENST00000569990 TRBV30A0A0K0K1B3 111 aa6.05□□□□□ -1.44
HCCAT5-201ENST00000569990 H0Y8G0 127 aa6.05□□□□□ -1.44
HCCAT5-201ENST00000569990 NUPR1O60356 82 aa6.05□□□□□ -1.44
HCCAT5-201ENST00000569990 PLA2G1BP04054 148 aaKnown RBP6.05□□□□□ -1.44
HCCAT5-201ENST00000569990 SPINK8P0C7L1 97 aa6.05□□□□□ -1.44
HCCAT5-201ENST00000569990 TLX1NBP0CAT3 122 aa6.05□□□□□ -1.44
HCCAT5-201ENST00000569990 ZNF22P17026 224 aaPredicted RBP6.05□□□□□ -1.44
HCCAT5-201ENST00000569990 CKS1BP61024 79 aa6.05□□□□□ -1.44
HCCAT5-201ENST00000569990 RPL18AQ02543 176 aaKnown RBP6.05□□□□□ -1.44
HCCAT5-201ENST00000569990 TRAV12-1A0A0B4J245 112 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 C11orf86A6NJI1 115 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 H3BRM9 83 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 HIST1H2BKO60814 126 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 HIST1H2BJP06899 126 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 HIST1H2BOP23527 126 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 HIST1H2BBP33778 126 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 HIST1H2BDP58876 126 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 KRTAP10-4P60372 401 aaPredicted RBP6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 HIST1H2BCP62807 126 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 HIST2H2BEQ16778 126 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 Q6ZRP5 223 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 HIST1H2BHQ93079 126 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 HIST1H2BNQ99877 126 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 HIST1H2BMQ99879 126 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
HCCAT5-201ENST00000569990 IGLV5-39A0A0G2JS06 123 aa6.03□□□□□ -1.44
HCCAT5-201ENST00000569990 NDUFC2-KCTD14E9PQ53 114 aa6.03□□□□□ -1.44
HCCAT5-201ENST00000569990 F8VRH5 84 aa6.03□□□□□ -1.44
HCCAT5-201ENST00000569990 LEPROTL1O95214 131 aa6.03□□□□□ -1.44
HCCAT5-201ENST00000569990 INAFM2P0DMQ5 153 aa6.03□□□□□ -1.44
HCCAT5-201ENST00000569990 CXCL5P42830 114 aa6.03□□□□□ -1.44
HCCAT5-201ENST00000569990 C9orf116Q5BN46 136 aaPredicted RBP6.03□□□□□ -1.44
HCCAT5-201ENST00000569990 COX7B2Q8TF08 81 aa6.03□□□□□ -1.44
HCCAT5-201ENST00000569990 A0A1W2PNN7 141 aa6.02□□□□□ -1.45
HCCAT5-201ENST00000569990 RPL37AP61513 92 aaKnown RBP6.02□□□□□ -1.45
HCCAT5-201ENST00000569990 PCLOQ9Y6V0 5065 aa6.01□□□□□ -1.45
HCCAT5-201ENST00000569990 LINC00587B1AMM8 73 aa6.01□□□□□ -1.45
HCCAT5-201ENST00000569990 SMIM6P0DI80 62 aa6.01□□□□□ -1.45
HCCAT5-201ENST00000569990 FABP4P15090 132 aa6.01□□□□□ -1.45
HCCAT5-201ENST00000569990 GAGE2EQ4V326 116 aa6.01□□□□□ -1.45
HCCAT5-201ENST00000569990 TMEM170BQ5T4T1 132 aa6.01□□□□□ -1.45
HCCAT5-201ENST00000569990 GAGE2DQ9UEU5 116 aa6.01□□□□□ -1.45
HCCAT5-201ENST00000569990 HSPB8Q9UJY1 196 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms