RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 OTOGQ6ZRI0 2925 aa4.76□□□□□ -1.65
SMG1-217ENST00000569764 A0A0J9YWU9 116 aa4.76□□□□□ -1.65
SMG1-217ENST00000569764 C2orf82Q6UX34 121 aa4.76□□□□□ -1.65
SMG1-217ENST00000569764 C5orf38Q86SI9 138 aa4.76□□□□□ -1.65
SMG1-217ENST00000569764 PRSS3P2Q8NHM4 247 aa4.76□□□□□ -1.65
SMG1-217ENST00000569764 UPK3BQ9BT76 320 aa4.76□□□□□ -1.65
SMG1-217ENST00000569764 C20orf197Q8N268 126 aa4.76□□□□□ -1.65
SMG1-217ENST00000569764 FAM167A-AS1Q96KT0 104 aa4.76□□□□□ -1.65
SMG1-217ENST00000569764 SCO2A0A1W2PP80 73 aa4.76□□□□□ -1.65
SMG1-217ENST00000569764 PRO0255Q9UI72 69 aa4.76□□□□□ -1.65
SMG1-217ENST00000569764 CR1P17927 2039 aa4.76□□□□□ -1.65
SMG1-217ENST00000569764 IGLV5-45A0A087WSX0 123 aa4.75□□□□□ -1.65
SMG1-217ENST00000569764 Q8N8P6 123 aa4.75□□□□□ -1.65
SMG1-217ENST00000569764 LCE6AA0A183 80 aa4.75□□□□□ -1.65
SMG1-217ENST00000569764 K7EMI3 77 aa4.75□□□□□ -1.65
SMG1-217ENST00000569764 RNASE4P34096 147 aaKnown RBP4.75□□□□□ -1.65
SMG1-217ENST00000569764 ORMDL3Q8N138 153 aa4.75□□□□□ -1.65
SMG1-217ENST00000569764 TMEM263Q8WUH6 116 aaKnown RBP4.75□□□□□ -1.65
SMG1-217ENST00000569764 RETNLBQ9BQ08 111 aa4.75□□□□□ -1.65
SMG1-217ENST00000569764 IGLV2-8P01709 118 aa4.75□□□□□ -1.65
SMG1-217ENST00000569764 FAM104BQ5XKR9 115 aa4.75□□□□□ -1.65
SMG1-217ENST00000569764 DIRC1Q969H9 104 aa4.75□□□□□ -1.65
SMG1-217ENST00000569764 LY96Q9Y6Y9 160 aa4.75□□□□□ -1.65
SMG1-217ENST00000569764 IGHV1OR15-1A0A075B7D0 117 aa4.74□□□□□ -1.65
SMG1-217ENST00000569764 FHL2Q14192 279 aa4.74□□□□□ -1.65
SMG1-217ENST00000569764 C8orf49Q96NF6 230 aa4.74□□□□□ -1.65
SMG1-217ENST00000569764 IGHV3OR16-8A0A075B7F1 116 aa4.74□□□□□ -1.65
SMG1-217ENST00000569764 PEX7O00628 323 aa4.74□□□□□ -1.65
SMG1-217ENST00000569764 MYOZ3Q8TDC0 251 aa4.74□□□□□ -1.65
SMG1-217ENST00000569764 C7orf33Q8WU49 177 aa4.74□□□□□ -1.65
SMG1-217ENST00000569764 I3L2K1 104 aa4.74□□□□□ -1.65
SMG1-217ENST00000569764 K7EQG2 157 aa4.74□□□□□ -1.65
SMG1-217ENST00000569764 ATXN8Q156A1 80 aa4.74□□□□□ -1.65
SMG1-217ENST00000569764 ZFP2Q6ZN57 461 aa4.74□□□□□ -1.65
SMG1-217ENST00000569764 RPL37AP8A6NKH3 93 aa4.73□□□□□ -1.65
SMG1-217ENST00000569764 K7EIM0 57 aa4.73□□□□□ -1.65
SMG1-217ENST00000569764 PHF5AQ7RTV0 110 aaKnown RBP4.73□□□□□ -1.65
SMG1-217ENST00000569764 TEX49A0A1B0GTD5 131 aa4.73□□□□□ -1.65
SMG1-217ENST00000569764 TRBV25-1A0A075B6N4 114 aa4.73□□□□□ -1.65
SMG1-217ENST00000569764 KRTAP16-1A8MUX0 517 aa4.72□□□□□ -1.65
SMG1-217ENST00000569764 IGKV1-17P01599 117 aa4.72□□□□□ -1.65
SMG1-217ENST00000569764 SLC25A29Q8N8R3 303 aa4.72□□□□□ -1.65
SMG1-217ENST00000569764 IGHV4-28A0A0C4DH34 117 aa4.72□□□□□ -1.65
SMG1-217ENST00000569764 CTSGP08311 255 aa4.72□□□□□ -1.65
SMG1-217ENST00000569764 PRSS1P07477 247 aa4.72□□□□□ -1.65
SMG1-217ENST00000569764 ATP5EP56381 51 aaPredicted RBP4.72□□□□□ -1.65
SMG1-217ENST00000569764 SPINK13Q1W4C9 94 aa4.72□□□□□ -1.65
SMG1-217ENST00000569764 EPM2AB3EWF7 344 aa4.72□□□□□ -1.65
SMG1-217ENST00000569764 H7C2G1 150 aa4.72□□□□□ -1.65
SMG1-217ENST00000569764 COX6CP09669 75 aa4.72□□□□□ -1.65
SMG1-217ENST00000569764 IGHV4-4A0A075B6R2 117 aa4.71□□□□□ -1.66
SMG1-217ENST00000569764 C16orf90A8MZG2 172 aa4.71□□□□□ -1.66
SMG1-217ENST00000569764 TRAV12-3A0A0B4J271 114 aa4.7□□□□□ -1.66
SMG1-217ENST00000569764 TSHBP01222 138 aa4.7□□□□□ -1.66
SMG1-217ENST00000569764 MGPP08493 103 aa4.7□□□□□ -1.66
SMG1-217ENST00000569764 LINC00269Q8N2A0 174 aa4.7□□□□□ -1.66
SMG1-217ENST00000569764 SCGB3A1Q96QR1 104 aa4.7□□□□□ -1.66
SMG1-217ENST00000569764 MUC4Q99102 2169 aa4.7□□□□□ -1.66
SMG1-217ENST00000569764 A0A0B4J2C4 111 aa4.7□□□□□ -1.66
SMG1-217ENST00000569764 LINC00322Q6ZN03 302 aaPredicted RBP4.7□□□□□ -1.66
SMG1-217ENST00000569764 ADM2Q7Z4H4 148 aa4.7□□□□□ -1.66
SMG1-217ENST00000569764 VWFP04275 2813 aa4.7□□□□□ -1.66
SMG1-217ENST00000569764 NOP10Q9NPE3 64 aaKnown RBP4.7□□□□□ -1.66
SMG1-217ENST00000569764 CHTF8P0CG12 524 aa4.69□□□□□ -1.66
SMG1-217ENST00000569764 IFI27P40305 119 aaPredicted RBP4.69□□□□□ -1.66
SMG1-217ENST00000569764 CASC10Q5T4H9 136 aa4.69□□□□□ -1.66
SMG1-217ENST00000569764 TMEM14CQ9P0S9 112 aa4.69□□□□□ -1.66
SMG1-217ENST00000569764 NDUFA12Q9UI09 145 aa4.69□□□□□ -1.66
SMG1-217ENST00000569764 PRSS2P07478 247 aa4.69□□□□□ -1.66
SMG1-217ENST00000569764 FXYD7P58549 80 aa4.69□□□□□ -1.66
SMG1-217ENST00000569764 CHCHD7Q9BUK0 85 aa4.69□□□□□ -1.66
SMG1-217ENST00000569764 A0A0J9YX75 114 aa4.69□□□□□ -1.66
SMG1-217ENST00000569764 HIST1H4AP62805 103 aaKnown RBP4.69□□□□□ -1.66
SMG1-217ENST00000569764 C10orf99Q6UWK7 81 aa4.68□□□□□ -1.66
SMG1-217ENST00000569764 TRBV10-2A0A0K0K1G8 114 aa4.68□□□□□ -1.66
SMG1-217ENST00000569764 IGKV2D-24A0A075B6R9 120 aa4.68□□□□□ -1.66
SMG1-217ENST00000569764 H3BRN7 92 aa4.68□□□□□ -1.66
SMG1-217ENST00000569764 XCL1P47992 114 aa4.68□□□□□ -1.66
SMG1-217ENST00000569764 H3BNG1 76 aa4.68□□□□□ -1.66
SMG1-217ENST00000569764 ADAMTSL4-AS1Q5T5F5 129 aa4.68□□□□□ -1.66
SMG1-217ENST00000569764 FAM74A4Q5TZK3 123 aa4.68□□□□□ -1.66
SMG1-217ENST00000569764 IGFL4Q6B9Z1 124 aa4.68□□□□□ -1.66
SMG1-217ENST00000569764 ATP11AUNQ6ZP68 121 aa4.67□□□□□ -1.66
SMG1-217ENST00000569764 IFI27L1Q96BM0 104 aa4.67□□□□□ -1.66
SMG1-217ENST00000569764 V9GYV3 84 aa4.67□□□□□ -1.66
SMG1-217ENST00000569764 TENM1Q9UKZ4 2725 aa4.67□□□□□ -1.66
SMG1-217ENST00000569764 ESRGQ1W209 222 aa4.67□□□□□ -1.66
SMG1-217ENST00000569764 IGLV2-11P01706 119 aa4.67□□□□□ -1.66
SMG1-217ENST00000569764 ZNF22P17026 224 aaPredicted RBP4.67□□□□□ -1.66
SMG1-217ENST00000569764 A0A0J9YXY3 114 aa4.66□□□□□ -1.66
SMG1-217ENST00000569764 ZNF575Q86XF7 245 aa4.66□□□□□ -1.66
SMG1-217ENST00000569764 LINC00476Q8WZB0 136 aa4.66□□□□□ -1.66
SMG1-217ENST00000569764 F8WEM9 126 aa4.66□□□□□ -1.66
SMG1-217ENST00000569764 LINC00242Q5T6M2 205 aa4.66□□□□□ -1.66
SMG1-217ENST00000569764 A0A0J9YY99 117 aa4.66□□□□□ -1.66
SMG1-217ENST00000569764 TRBV10-1A0A0K0K1A3 114 aa4.66□□□□□ -1.66
SMG1-217ENST00000569764 M0R2N4 97 aa4.66□□□□□ -1.66
SMG1-217ENST00000569764 C18orf65Q6ZTR6 163 aa4.66□□□□□ -1.66
SMG1-217ENST00000569764 M0R3E3 92 aa4.65□□□□□ -1.66
SMG1-217ENST00000569764 GDF5OSQ5U4N7 250 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms