RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 SPATA45Q537H7 98 aa5.76□□□□□ -1.49
KLHDC4-220ENST00000568338 TTC32Q5I0X7 151 aa5.76□□□□□ -1.49
KLHDC4-220ENST00000568338 STPG4Q8N801 248 aa5.76□□□□□ -1.49
KLHDC4-220ENST00000568338 CDKN2A-AS1Q9UH64 79 aa5.76□□□□□ -1.49
KLHDC4-220ENST00000568338 PLA2G2DQ9UNK4 145 aa5.76□□□□□ -1.49
KLHDC4-220ENST00000568338 TRAV8-3A0A0A6YYJ7 113 aa5.75□□□□□ -1.49
KLHDC4-220ENST00000568338 IGHV3OR16-9A0A0B4J2B5 98 aa5.75□□□□□ -1.49
KLHDC4-220ENST00000568338 E9PLD3 99 aa5.75□□□□□ -1.49
KLHDC4-220ENST00000568338 CD164L2Q6UWJ8 174 aa5.75□□□□□ -1.49
KLHDC4-220ENST00000568338 RMI2Q96E14 147 aa5.75□□□□□ -1.49
KLHDC4-220ENST00000568338 C1orf43Q9BWL3 253 aa5.75□□□□□ -1.49
KLHDC4-220ENST00000568338 A0A087WZ39 114 aa5.74□□□□□ -1.49
KLHDC4-220ENST00000568338 GAGE12HA6NDE8 117 aa5.74□□□□□ -1.49
KLHDC4-220ENST00000568338 COX7A2LO14548 114 aa5.74□□□□□ -1.49
KLHDC4-220ENST00000568338 SPINK8P0C7L1 97 aa5.74□□□□□ -1.49
KLHDC4-220ENST00000568338 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
KLHDC4-220ENST00000568338 Q9HAA7 133 aa5.74□□□□□ -1.49
KLHDC4-220ENST00000568338 IGKV2D-24A0A075B6R9 120 aa5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 IGHV1-58A0A0C4DH39 117 aa5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 NBDYA0A0U1RRE5 68 aa5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 SMIM1B2RUZ4 78 aa5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 LEPROTO15243 131 aa5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 MALP21145 153 aa5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 NMUP48645 174 aa5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 FOXI1Q12951 378 aa5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 C5orf38Q86SI9 138 aa5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 LINC01561Q8N1V8 128 aa5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 PLEKHB2Q96CS7 222 aa5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 SRRM2Q9UQ35 2752 aaKnown RBP5.73□□□□□ -1.49
KLHDC4-220ENST00000568338 IGHV3-64A0A075B6Q5 118 aa5.72□□□□□ -1.49
KLHDC4-220ENST00000568338 IGKV2D-26A0A0A0MRZ7 120 aa5.72□□□□□ -1.49
KLHDC4-220ENST00000568338 IGLV5-39A0A0G2JS06 123 aa5.72□□□□□ -1.49
KLHDC4-220ENST00000568338 TSTD3H0UI37 97 aa5.72□□□□□ -1.49
KLHDC4-220ENST00000568338 APOMO95445 188 aa5.72□□□□□ -1.49
KLHDC4-220ENST00000568338 LGALS3P17931 250 aaKnown RBP5.72□□□□□ -1.49
KLHDC4-220ENST00000568338 KRTAP1-5Q9BYS1 174 aa5.72□□□□□ -1.49
KLHDC4-220ENST00000568338 COX11Q9Y6N1 276 aa5.72□□□□□ -1.49
KLHDC4-220ENST00000568338 J3QQQ9 107 aa5.71□□□□□ -1.5
KLHDC4-220ENST00000568338 COX8AP10176 69 aa5.71□□□□□ -1.5
KLHDC4-220ENST00000568338 KRTAP26-1Q6PEX3 210 aa5.71□□□□□ -1.5
KLHDC4-220ENST00000568338 TM2D2Q9BX73 214 aa5.71□□□□□ -1.5
KLHDC4-220ENST00000568338 TSPEAR-AS2P59090 65 aa5.7□□□□□ -1.5
KLHDC4-220ENST00000568338 SLC25A34Q6PIV7 304 aa5.7□□□□□ -1.5
KLHDC4-220ENST00000568338 C14orf144Q96I85 54 aa5.7□□□□□ -1.5
KLHDC4-220ENST00000568338 PRO1933Q9H354 126 aa5.7□□□□□ -1.5
KLHDC4-220ENST00000568338 ZNF815PA8K554 130 aa5.69□□□□□ -1.5
KLHDC4-220ENST00000568338 DLEU1O43261 78 aa5.69□□□□□ -1.5
KLHDC4-220ENST00000568338 PLA2G1BP04054 148 aaKnown RBP5.69□□□□□ -1.5
KLHDC4-220ENST00000568338 PRSS2P07478 247 aa5.69□□□□□ -1.5
KLHDC4-220ENST00000568338 PCP2Q8IVA1 136 aa5.69□□□□□ -1.5
KLHDC4-220ENST00000568338 Q8IZM0 81 aa5.69□□□□□ -1.5
KLHDC4-220ENST00000568338 C6orf223Q8N319 242 aa5.69□□□□□ -1.5
KLHDC4-220ENST00000568338 COX7B2Q8TF08 81 aa5.69□□□□□ -1.5
KLHDC4-220ENST00000568338 ORAOV1Q8WV07 137 aa5.69□□□□□ -1.5
KLHDC4-220ENST00000568338 TOMM7Q9P0U1 55 aa5.69□□□□□ -1.5
KLHDC4-220ENST00000568338 UQCR10Q9UDW1 63 aa5.69□□□□□ -1.5
KLHDC4-220ENST00000568338 MYMXA0A1B0GTQ4 84 aa5.68□□□□□ -1.5
KLHDC4-220ENST00000568338 CXCL5P42830 114 aa5.68□□□□□ -1.5
KLHDC4-220ENST00000568338 SPAG11BQ08648 103 aa5.68□□□□□ -1.5
KLHDC4-220ENST00000568338 Q5VSD8 79 aa5.68□□□□□ -1.5
KLHDC4-220ENST00000568338 CFAP161Q6P656 301 aa5.68□□□□□ -1.5
KLHDC4-220ENST00000568338 SFTA2Q6UW10 78 aa5.68□□□□□ -1.5
KLHDC4-220ENST00000568338 BOD1L2Q8IYS8 172 aa5.68□□□□□ -1.5
KLHDC4-220ENST00000568338 TTTY13Q9BZ97 58 aa5.68□□□□□ -1.5
KLHDC4-220ENST00000568338 NDUFA12Q9UI09 145 aa5.68□□□□□ -1.5
KLHDC4-220ENST00000568338 NDUFA1O15239 70 aa5.67□□□□□ -1.5
KLHDC4-220ENST00000568338 PSCAO43653 123 aa5.67□□□□□ -1.5
KLHDC4-220ENST00000568338 C6orf226Q5I0X4 101 aa5.67□□□□□ -1.5
KLHDC4-220ENST00000568338 MIEN1Q9BRT3 115 aa5.67□□□□□ -1.5
KLHDC4-220ENST00000568338 APOBP04114 4563 aaKnown RBP5.67□□□□□ -1.5
KLHDC4-220ENST00000568338 GVQW2A0A096LPI5 108 aaPredicted RBP5.66□□□□□ -1.5
KLHDC4-220ENST00000568338 CKS1BP61024 79 aa5.66□□□□□ -1.5
KLHDC4-220ENST00000568338 HERV-K104P63124 156 aa5.66□□□□□ -1.5
KLHDC4-220ENST00000568338 SCGB1D4Q6XE38 83 aa5.66□□□□□ -1.5
KLHDC4-220ENST00000568338 C15orf56Q8N910 161 aa5.66□□□□□ -1.5
KLHDC4-220ENST00000568338 ZNF625Q96I27 306 aaPredicted RBP5.66□□□□□ -1.5
KLHDC4-220ENST00000568338 LRP1BQ9NZR2 4599 aa5.65□□□□□ -1.5
KLHDC4-220ENST00000568338 USP17L23D6RBM5 183 aa5.65□□□□□ -1.5
KLHDC4-220ENST00000568338 ZNF561-AS1K7EIQ3 104 aa5.65□□□□□ -1.5
KLHDC4-220ENST00000568338 HNRNPA3P51991 378 aaKnown RBP5.65□□□□□ -1.5
KLHDC4-220ENST00000568338 KIAA0087Q14695 138 aa5.65□□□□□ -1.5
KLHDC4-220ENST00000568338 HIGD2BQ4VC39 106 aa5.65□□□□□ -1.5
KLHDC4-220ENST00000568338 TP73-AS1Q9UF72 201 aa5.65□□□□□ -1.5
KLHDC4-220ENST00000568338 F8WDY8 70 aa5.64□□□□□ -1.51
KLHDC4-220ENST00000568338 DDTP30046 118 aa5.64□□□□□ -1.51
KLHDC4-220ENST00000568338 Q6ZRN7 208 aaPredicted RBP5.64□□□□□ -1.51
KLHDC4-220ENST00000568338 C2orf91Q6ZV80 131 aa5.64□□□□□ -1.51
KLHDC4-220ENST00000568338 HIGD1BQ9P298 99 aa5.64□□□□□ -1.51
KLHDC4-220ENST00000568338 A0A0J9YXY3 114 aa5.63□□□□□ -1.51
KLHDC4-220ENST00000568338 PCP4L1A6NKN8 68 aa5.63□□□□□ -1.51
KLHDC4-220ENST00000568338 LINC00587B1AMM8 73 aa5.63□□□□□ -1.51
KLHDC4-220ENST00000568338 TIMM17BO60830 172 aa5.63□□□□□ -1.51
KLHDC4-220ENST00000568338 KRTAP10-2P60368 255 aa5.63□□□□□ -1.51
KLHDC4-220ENST00000568338 C14orf177Q52M58 125 aa5.63□□□□□ -1.51
KLHDC4-220ENST00000568338 MEIG1Q5JSS6 88 aa5.63□□□□□ -1.51
KLHDC4-220ENST00000568338 C2orf82Q6UX34 121 aa5.63□□□□□ -1.51
KLHDC4-220ENST00000568338 NTN5Q8WTR8 489 aaPredicted RBP5.63□□□□□ -1.51
KLHDC4-220ENST00000568338 C2orf48Q96LS8 159 aa5.63□□□□□ -1.51
KLHDC4-220ENST00000568338 CAMK2N2Q96S95 79 aa5.63□□□□□ -1.51
KLHDC4-220ENST00000568338 TMEM238C9JI98 176 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms