RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 VCX2Q9H322 139 aa6.09□□□□□ -1.43
CAPN3-216ENST00000567071 CSDC2Q9Y534 153 aaKnown RBP6.09□□□□□ -1.43
CAPN3-216ENST00000567071 TRAV13-1A0A0B4J241 112 aa6.08□□□□□ -1.44
CAPN3-216ENST00000567071 SYS1-DBNDD2H3BUS1 97 aa6.08□□□□□ -1.44
CAPN3-216ENST00000567071 CRPP02741 224 aa6.08□□□□□ -1.44
CAPN3-216ENST00000567071 NPSP0C0P6 89 aa6.08□□□□□ -1.44
CAPN3-216ENST00000567071 AKR1D1P51857 326 aa6.08□□□□□ -1.44
CAPN3-216ENST00000567071 UBE2WQ96B02 151 aa6.08□□□□□ -1.44
CAPN3-216ENST00000567071 AMELXQ99217 191 aa6.08□□□□□ -1.44
CAPN3-216ENST00000567071 PMCHL2Q9BQD1 86 aa6.08□□□□□ -1.44
CAPN3-216ENST00000567071 C2orf88Q9BSF0 95 aa6.08□□□□□ -1.44
CAPN3-216ENST00000567071 CST9LQ9H4G1 147 aa6.08□□□□□ -1.44
CAPN3-216ENST00000567071 IGLV10-54A0A075B6I4 117 aa6.07□□□□□ -1.44
CAPN3-216ENST00000567071 A0A087WYN8 130 aa6.07□□□□□ -1.44
CAPN3-216ENST00000567071 REG3AQ06141 175 aa6.07□□□□□ -1.44
CAPN3-216ENST00000567071 CIRBPQ14011 172 aaKnown RBP6.07□□□□□ -1.44
CAPN3-216ENST00000567071 TRAV12-1A0A0B4J245 112 aa6.06□□□□□ -1.44
CAPN3-216ENST00000567071 LOC105371267A0A1B0GV96 52 aa6.06□□□□□ -1.44
CAPN3-216ENST00000567071 UBE2D1P51668 147 aa6.06□□□□□ -1.44
CAPN3-216ENST00000567071 PET117Q6UWS5 81 aa6.06□□□□□ -1.44
CAPN3-216ENST00000567071 SDIM1Q6ZPB5 146 aa6.06□□□□□ -1.44
CAPN3-216ENST00000567071 MRPL35Q9NZE8 188 aaKnown RBP6.06□□□□□ -1.44
CAPN3-216ENST00000567071 CHTOPQ9Y3Y2 248 aaKnown RBP6.06□□□□□ -1.44
CAPN3-216ENST00000567071 IGLV4-69A0A075B6H9 119 aa6.05□□□□□ -1.44
CAPN3-216ENST00000567071 LINC00959A0A1B0GUT2 108 aa6.05□□□□□ -1.44
CAPN3-216ENST00000567071 C20orf202A1L168 122 aa6.05□□□□□ -1.44
CAPN3-216ENST00000567071 F8VRH5 84 aa6.05□□□□□ -1.44
CAPN3-216ENST00000567071 SCGB1D1O95968 90 aa6.05□□□□□ -1.44
CAPN3-216ENST00000567071 LCE3BQ5TA77 95 aa6.05□□□□□ -1.44
CAPN3-216ENST00000567071 LINC01545Q5VT33 79 aa6.05□□□□□ -1.44
CAPN3-216ENST00000567071 ENHOQ6UWT2 76 aa6.05□□□□□ -1.44
CAPN3-216ENST00000567071 C1orf43Q9BWL3 253 aa6.05□□□□□ -1.44
CAPN3-216ENST00000567071 PRR34Q9NV39 138 aa6.05□□□□□ -1.44
CAPN3-216ENST00000567071 PSORS1C2Q9UIG4 136 aa6.05□□□□□ -1.44
CAPN3-216ENST00000567071 C11orf86A6NJI1 115 aa6.04□□□□□ -1.44
CAPN3-216ENST00000567071 USP17L23D6RBM5 183 aa6.04□□□□□ -1.44
CAPN3-216ENST00000567071 CCL25O15444 150 aa6.04□□□□□ -1.44
CAPN3-216ENST00000567071 IGLC3P0DOY3 106 aa6.04□□□□□ -1.44
CAPN3-216ENST00000567071 XCL1P47992 114 aa6.04□□□□□ -1.44
CAPN3-216ENST00000567071 SS18Q15532 418 aa6.04□□□□□ -1.44
CAPN3-216ENST00000567071 LINC00242Q5T6M2 205 aa6.04□□□□□ -1.44
CAPN3-216ENST00000567071 ATOH7Q8N100 152 aa6.04□□□□□ -1.44
CAPN3-216ENST00000567071 CHCHD10Q8WYQ3 142 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-216ENST00000567071 DPM2O94777 84 aa6.03□□□□□ -1.44
CAPN3-216ENST00000567071 LINC01547P58512 204 aaPredicted RBP6.03□□□□□ -1.44
CAPN3-216ENST00000567071 COX6A2Q02221 97 aa6.03□□□□□ -1.44
CAPN3-216ENST00000567071 MIAQ16674 131 aa6.03□□□□□ -1.44
CAPN3-216ENST00000567071 GEMIN7Q9H840 131 aaKnown RBP6.03□□□□□ -1.44
CAPN3-216ENST00000567071 PLAC8Q9NZF1 115 aa6.03□□□□□ -1.44
CAPN3-216ENST00000567071 IGHV3-64A0A075B6Q5 118 aa6.02□□□□□ -1.45
CAPN3-216ENST00000567071 TINCRA0A1B0GVN0 87 aa6.02□□□□□ -1.45
CAPN3-216ENST00000567071 GAGE12HA6NDE8 117 aa6.02□□□□□ -1.45
CAPN3-216ENST00000567071 IGKCP01834 107 aa6.02□□□□□ -1.45
CAPN3-216ENST00000567071 ZNF22P17026 224 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-216ENST00000567071 LINC00469Q8N7U9 141 aa6.02□□□□□ -1.45
CAPN3-216ENST00000567071 EIF4EBP3O60516 100 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-216ENST00000567071 PLNP26678 52 aa6.01□□□□□ -1.45
CAPN3-216ENST00000567071 HERVK_113P63121 156 aa6.01□□□□□ -1.45
CAPN3-216ENST00000567071 JOSD1Q15040 202 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-216ENST00000567071 PYY3Q5JQD4 70 aa6.01□□□□□ -1.45
CAPN3-216ENST00000567071 TMEM170BQ5T4T1 132 aa6.01□□□□□ -1.45
CAPN3-216ENST00000567071 SPACA4Q8TDM5 124 aa6.01□□□□□ -1.45
CAPN3-216ENST00000567071 CDKN2A-AS1Q9UH64 79 aa6.01□□□□□ -1.45
CAPN3-216ENST00000567071 TRAV16A0A0A6YYK6 109 aaPredicted RBP6□□□□□ -1.45
CAPN3-216ENST00000567071 TRAV8-4A0A0B4J246 113 aa6□□□□□ -1.45
CAPN3-216ENST00000567071 SPINK8P0C7L1 97 aa6□□□□□ -1.45
CAPN3-216ENST00000567071 SEC11AP67812 179 aa6□□□□□ -1.45
CAPN3-216ENST00000567071 FOXI1Q12951 378 aa6□□□□□ -1.45
CAPN3-216ENST00000567071 MAJINQ3KP22 176 aa6□□□□□ -1.45
CAPN3-216ENST00000567071 CD164L2Q6UWJ8 174 aa6□□□□□ -1.45
CAPN3-216ENST00000567071 FAM19A3Q7Z5A8 133 aa6□□□□□ -1.45
CAPN3-216ENST00000567071 C5orf38Q86SI9 138 aa6□□□□□ -1.45
CAPN3-216ENST00000567071 IGLV5-45A0A087WSX0 123 aa5.99□□□□□ -1.45
CAPN3-216ENST00000567071 IGHV3OR16-9A0A0B4J2B5 98 aa5.99□□□□□ -1.45
CAPN3-216ENST00000567071 hDV102S1A0JD36 115 aa5.99□□□□□ -1.45
CAPN3-216ENST00000567071 COX7A2LO14548 114 aa5.99□□□□□ -1.45
CAPN3-216ENST00000567071 CHTF8P0CG12 524 aa5.99□□□□□ -1.45
CAPN3-216ENST00000567071 KRTAP26-1Q6PEX3 210 aa5.99□□□□□ -1.45
CAPN3-216ENST00000567071 H3BRM9 83 aa5.98□□□□□ -1.45
CAPN3-216ENST00000567071 SRSF9Q13242 221 aaKnown RBP eCLIP5.98□□□□□ -1.45
CAPN3-216ENST00000567071 STPG4Q8N801 248 aa5.98□□□□□ -1.45
CAPN3-216ENST00000567071 KRTAP9-9Q9BYP9 154 aa5.98□□□□□ -1.45
CAPN3-216ENST00000567071 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
CAPN3-216ENST00000567071 A0A087WZ39 114 aa5.97□□□□□ -1.45
CAPN3-216ENST00000567071 TMEM223A0PJW6 202 aa5.97□□□□□ -1.45
CAPN3-216ENST00000567071 SMIM1B2RUZ4 78 aa5.97□□□□□ -1.45
CAPN3-216ENST00000567071 SMIM6P0DI80 62 aa5.97□□□□□ -1.45
CAPN3-216ENST00000567071 MALP21145 153 aa5.97□□□□□ -1.45
CAPN3-216ENST00000567071 HERVK_113P61574 105 aa5.97□□□□□ -1.45
CAPN3-216ENST00000567071 ANKRD39Q53RE8 183 aa5.97□□□□□ -1.45
CAPN3-216ENST00000567071 Q6ZRP5 223 aa5.97□□□□□ -1.45
CAPN3-216ENST00000567071 HSBP1L1C9JCN9 74 aa5.96□□□□□ -1.46
CAPN3-216ENST00000567071 CNBPP62633 177 aaKnown RBP5.96□□□□□ -1.46
CAPN3-216ENST00000567071 ORAOV1Q8WV07 137 aa5.96□□□□□ -1.46
CAPN3-216ENST00000567071 VAMP8Q9BV40 100 aa5.96□□□□□ -1.46
CAPN3-216ENST00000567071 TOMM7Q9P0U1 55 aa5.96□□□□□ -1.46
CAPN3-216ENST00000567071 PAM16Q9Y3D7 125 aa5.96□□□□□ -1.46
CAPN3-216ENST00000567071 IGKV2D-26A0A0A0MRZ7 120 aa5.95□□□□□ -1.46
CAPN3-216ENST00000567071 HIGD2BQ4VC39 106 aa5.95□□□□□ -1.46
CAPN3-216ENST00000567071 C15orf56Q8N910 161 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms