RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 GEMIN7Q9H840 131 aaKnown RBP6.29□□□□□ -1.4
GTF3C1-206ENST00000566779 SMCO4Q9NRQ5 59 aa6.29□□□□□ -1.4
GTF3C1-206ENST00000566779 TRAV9-1A0A075B6T8 112 aa6.28□□□□□ -1.4
GTF3C1-206ENST00000566779 CKS1BP61024 79 aa6.28□□□□□ -1.4
GTF3C1-206ENST00000566779 PAPPA-AS1Q5QFB9 102 aa6.28□□□□□ -1.4
GTF3C1-206ENST00000566779 SERTAD4-AS1Q5TG53 156 aa6.28□□□□□ -1.4
GTF3C1-206ENST00000566779 FA2HQ7L5A8 372 aa6.28□□□□□ -1.4
GTF3C1-206ENST00000566779 PKHD1L1Q86WI1 4243 aa6.27□□□□□ -1.41
GTF3C1-206ENST00000566779 FAT3Q8TDW7 4589 aa6.27□□□□□ -1.41
GTF3C1-206ENST00000566779 IGIPA6NJ69 53 aa6.27□□□□□ -1.41
GTF3C1-206ENST00000566779 K7EMI3 77 aa6.27□□□□□ -1.41
GTF3C1-206ENST00000566779 UBE2BP63146 152 aa6.27□□□□□ -1.41
GTF3C1-206ENST00000566779 RHEBQ15382 184 aa6.27□□□□□ -1.41
GTF3C1-206ENST00000566779 C1orf137Q5JT78 98 aa6.27□□□□□ -1.41
GTF3C1-206ENST00000566779 LINC00469Q8N7U9 141 aa6.27□□□□□ -1.41
GTF3C1-206ENST00000566779 AMELXQ99217 191 aa6.27□□□□□ -1.41
GTF3C1-206ENST00000566779 ALKBH7Q9BT30 221 aaPredicted RBP6.27□□□□□ -1.41
GTF3C1-206ENST00000566779 F8WDY8 70 aa6.26□□□□□ -1.41
GTF3C1-206ENST00000566779 MT1HL1P0DM35 61 aa6.26□□□□□ -1.41
GTF3C1-206ENST00000566779 G0S2P27469 103 aa6.26□□□□□ -1.41
GTF3C1-206ENST00000566779 HERVK_113P63121 156 aa6.26□□□□□ -1.41
GTF3C1-206ENST00000566779 KIAA0087Q14695 138 aa6.26□□□□□ -1.41
GTF3C1-206ENST00000566779 REG3GQ6UW15 175 aa6.26□□□□□ -1.41
GTF3C1-206ENST00000566779 TOMM6Q96B49 74 aa6.26□□□□□ -1.41
GTF3C1-206ENST00000566779 TIMM17AQ99595 171 aa6.26□□□□□ -1.41
GTF3C1-206ENST00000566779 GNB1LQ9BYB4 327 aa6.26□□□□□ -1.41
GTF3C1-206ENST00000566779 CDKN2A-AS1Q9UH64 79 aa6.26□□□□□ -1.41
GTF3C1-206ENST00000566779 PSORS1C2Q9UIG4 136 aa6.26□□□□□ -1.41
GTF3C1-206ENST00000566779 TRBV30A0A0K0K1B3 111 aa6.25□□□□□ -1.41
GTF3C1-206ENST00000566779 M0QXV9 152 aa6.25□□□□□ -1.41
GTF3C1-206ENST00000566779 APOC3P02656 99 aa6.25□□□□□ -1.41
GTF3C1-206ENST00000566779 NDUFA6P56556 154 aa6.25□□□□□ -1.41
GTF3C1-206ENST00000566779 SEC11AP67812 179 aa6.25□□□□□ -1.41
GTF3C1-206ENST00000566779 C6orf226Q5I0X4 101 aa6.25□□□□□ -1.41
GTF3C1-206ENST00000566779 SPINK6Q6UWN8 80 aa6.25□□□□□ -1.41
GTF3C1-206ENST00000566779 NDUFC2-KCTD14E9PQ53 114 aa6.24□□□□□ -1.41
GTF3C1-206ENST00000566779 NDUFA5Q16718 116 aa6.24□□□□□ -1.41
GTF3C1-206ENST00000566779 COX19Q49B96 90 aa6.24□□□□□ -1.41
GTF3C1-206ENST00000566779 ERASQ7Z444 233 aa6.24□□□□□ -1.41
GTF3C1-206ENST00000566779 CARHSP1Q9Y2V2 147 aaKnown RBP6.24□□□□□ -1.41
GTF3C1-206ENST00000566779 TRAPPC1Q9Y5R8 145 aa6.24□□□□□ -1.41
GTF3C1-206ENST00000566779 SPINK8P0C7L1 97 aa6.23□□□□□ -1.41
GTF3C1-206ENST00000566779 Q8IZM0 81 aa6.23□□□□□ -1.41
GTF3C1-206ENST00000566779 XAGE1AQ9HD64 81 aa6.23□□□□□ -1.41
GTF3C1-206ENST00000566779 TLX1NBP0CAT3 122 aa6.22□□□□□ -1.41
GTF3C1-206ENST00000566779 PMCHL1Q16048 86 aa6.22□□□□□ -1.41
GTF3C1-206ENST00000566779 C9orf129Q5T035 196 aaKnown RBP6.22□□□□□ -1.41
GTF3C1-206ENST00000566779 C10orf91Q5T1B1 145 aa6.22□□□□□ -1.41
GTF3C1-206ENST00000566779 LINC01561Q8N1V8 128 aa6.22□□□□□ -1.41
GTF3C1-206ENST00000566779 SMIM1B2RUZ4 78 aa6.21□□□□□ -1.42
GTF3C1-206ENST00000566779 KRTAP11-1Q8IUC1 163 aa6.21□□□□□ -1.42
GTF3C1-206ENST00000566779 COX7B2Q8TF08 81 aa6.21□□□□□ -1.42
GTF3C1-206ENST00000566779 LINC01600Q96MT4 127 aa6.21□□□□□ -1.42
GTF3C1-206ENST00000566779 A0A0A0MQY5 61 aa6.2□□□□□ -1.42
GTF3C1-206ENST00000566779 TINCRA0A1B0GVN0 87 aa6.2□□□□□ -1.42
GTF3C1-206ENST00000566779 F8VRH5 84 aa6.2□□□□□ -1.42
GTF3C1-206ENST00000566779 SNAPINO95295 136 aa6.2□□□□□ -1.42
GTF3C1-206ENST00000566779 IGLV7-43P04211 117 aa6.2□□□□□ -1.42
GTF3C1-206ENST00000566779 RAB5BP61020 215 aa6.2□□□□□ -1.42
GTF3C1-206ENST00000566779 PMVKQ15126 192 aa6.2□□□□□ -1.42
GTF3C1-206ENST00000566779 CST9LQ9H4G1 147 aa6.2□□□□□ -1.42
GTF3C1-206ENST00000566779 H3BRM9 83 aa6.19□□□□□ -1.42
GTF3C1-206ENST00000566779 CXCL5P42830 114 aa6.19□□□□□ -1.42
GTF3C1-206ENST00000566779 SRSF9Q13242 221 aaKnown RBP eCLIP6.19□□□□□ -1.42
GTF3C1-206ENST00000566779 FAM19A3Q7Z5A8 133 aa6.19□□□□□ -1.42
GTF3C1-206ENST00000566779 KRTAP7-1Q8IUC3 87 aa6.19□□□□□ -1.42
GTF3C1-206ENST00000566779 SVBPQ8N300 66 aa6.19□□□□□ -1.42
GTF3C1-206ENST00000566779 C18orf32Q8TCD1 76 aa6.19□□□□□ -1.42
GTF3C1-206ENST00000566779 LINC01546A6NGU7 62 aa6.18□□□□□ -1.42
GTF3C1-206ENST00000566779 LINC01549A6NIU2 74 aa6.18□□□□□ -1.42
GTF3C1-206ENST00000566779 HBDP02042 147 aa6.18□□□□□ -1.42
GTF3C1-206ENST00000566779 PDZD11Q5EBL8 140 aa6.18□□□□□ -1.42
GTF3C1-206ENST00000566779 DIRC1Q969H9 104 aa6.18□□□□□ -1.42
GTF3C1-206ENST00000566779 URB1-AS1Q96HZ7 61 aa6.17□□□□□ -1.42
GTF3C1-206ENST00000566779 HMCN2Q8NDA2 5059 aa6.17□□□□□ -1.42
GTF3C1-206ENST00000566779 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
GTF3C1-206ENST00000566779 A0A096LNJ9 63 aa6.16□□□□□ -1.42
GTF3C1-206ENST00000566779 ATP5LO75964 103 aa6.16□□□□□ -1.42
GTF3C1-206ENST00000566779 LINC00614P0C842 121 aa6.16□□□□□ -1.42
GTF3C1-206ENST00000566779 PFN2P35080 140 aa6.16□□□□□ -1.42
GTF3C1-206ENST00000566779 C22orf24Q9Y442 160 aa6.16□□□□□ -1.42
GTF3C1-206ENST00000566779 RPL37AP8A6NKH3 93 aa6.15□□□□□ -1.42
GTF3C1-206ENST00000566779 H0Y9J4 135 aa6.15□□□□□ -1.42
GTF3C1-206ENST00000566779 IGLC3P0DOY3 106 aa6.15□□□□□ -1.42
GTF3C1-206ENST00000566779 TMEM170BQ5T4T1 132 aa6.15□□□□□ -1.42
GTF3C1-206ENST00000566779 BAGE3Q86Y29 109 aa6.15□□□□□ -1.42
GTF3C1-206ENST00000566779 CBLN2Q8IUK8 224 aa6.15□□□□□ -1.42
GTF3C1-206ENST00000566779 PRR26Q8N8Z3 221 aa6.15□□□□□ -1.42
GTF3C1-206ENST00000566779 NKAPP1Q8N9T2 125 aa6.15□□□□□ -1.42
GTF3C1-206ENST00000566779 ZNF625Q96I27 306 aaPredicted RBP6.15□□□□□ -1.42
GTF3C1-206ENST00000566779 H0Y8G0 127 aa6.14□□□□□ -1.43
GTF3C1-206ENST00000566779 ZNF22P17026 224 aaPredicted RBP6.14□□□□□ -1.43
GTF3C1-206ENST00000566779 LBHQ53QV2 105 aaPredicted RBP6.14□□□□□ -1.43
GTF3C1-206ENST00000566779 MRPL55Q7Z7F7 128 aaKnown RBP6.14□□□□□ -1.43
GTF3C1-206ENST00000566779 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
GTF3C1-206ENST00000566779 C11orf86A6NJI1 115 aa6.13□□□□□ -1.43
GTF3C1-206ENST00000566779 SCO1O75880 301 aa6.13□□□□□ -1.43
GTF3C1-206ENST00000566779 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
GTF3C1-206ENST00000566779 CHTOPQ9Y3Y2 248 aaKnown RBP6.12□□□□□ -1.43
GTF3C1-206ENST00000566779 A0A0U1RRA0 63 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms