RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 PMVKQ15126 192 aa12.04□□□□□ -0.48
CCDC113-204ENST00000566498 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
CCDC113-204ENST00000566498 NDUFA6P56556 154 aa12.03□□□□□ -0.48
CCDC113-204ENST00000566498 Q8IZM0 81 aa12.03□□□□□ -0.48
CCDC113-204ENST00000566498 HERC1Q15751 4861 aa12.03□□□□□ -0.48
CCDC113-204ENST00000566498 RAB5BP61020 215 aa12.02□□□□□ -0.49
CCDC113-204ENST00000566498 PHF5AQ7RTV0 110 aaKnown RBP12.01□□□□□ -0.49
CCDC113-204ENST00000566498 URB1-AS1Q96HZ7 61 aa12.01□□□□□ -0.49
CCDC113-204ENST00000566498 LRP1Q07954 4544 aaKnown RBP12□□□□□ -0.49
CCDC113-204ENST00000566498 FAM168BA1KXE4 195 aa12□□□□□ -0.49
CCDC113-204ENST00000566498 NDUFC2-KCTD14E9PQ53 114 aa12□□□□□ -0.49
CCDC113-204ENST00000566498 PMCHL1Q16048 86 aa12□□□□□ -0.49
CCDC113-204ENST00000566498 HBDP02042 147 aa11.99□□□□□ -0.49
CCDC113-204ENST00000566498 SLC7A5P1Q8MH63 180 aa11.99□□□□□ -0.49
CCDC113-204ENST00000566498 PDZD11Q5EBL8 140 aa11.98□□□□□ -0.49
CCDC113-204ENST00000566498 FAM19A5Q7Z5A7 132 aaPredicted RBP11.98□□□□□ -0.49
CCDC113-204ENST00000566498 YPEL4Q96NS1 127 aa11.98□□□□□ -0.49
CCDC113-204ENST00000566498 A0A096LNJ9 63 aa11.97□□□□□ -0.49
CCDC113-204ENST00000566498 F8VRH5 84 aa11.97□□□□□ -0.49
CCDC113-204ENST00000566498 SMIM1B2RUZ4 78 aa11.96□□□□□ -0.49
CCDC113-204ENST00000566498 SPINK8P0C7L1 97 aa11.96□□□□□ -0.49
CCDC113-204ENST00000566498 CBLN2Q8IUK8 224 aa11.96□□□□□ -0.49
CCDC113-204ENST00000566498 COX7B2Q8TF08 81 aa11.96□□□□□ -0.49
CCDC113-204ENST00000566498 PSORS1C2Q9UIG4 136 aa11.96□□□□□ -0.49
CCDC113-204ENST00000566498 IGLV5-45A0A087WSX0 123 aa11.95□□□□□ -0.5
CCDC113-204ENST00000566498 H3BRM9 83 aa11.95□□□□□ -0.5
CCDC113-204ENST00000566498 ATP5LO75964 103 aa11.95□□□□□ -0.5
CCDC113-204ENST00000566498 SPINK6Q6UWN8 80 aa11.95□□□□□ -0.5
CCDC113-204ENST00000566498 PKHD1L1Q86WI1 4243 aa11.94□□□□□ -0.5
CCDC113-204ENST00000566498 CXCL5P42830 114 aa11.94□□□□□ -0.5
CCDC113-204ENST00000566498 C1orf137Q5JT78 98 aa11.93□□□□□ -0.5
CCDC113-204ENST00000566498 C9orf129Q5T035 196 aaKnown RBP11.93□□□□□ -0.5
CCDC113-204ENST00000566498 BAGE3Q86Y29 109 aa11.93□□□□□ -0.5
CCDC113-204ENST00000566498 IGLC3P0DOY3 106 aa11.92□□□□□ -0.5
CCDC113-204ENST00000566498 SRSF9Q13242 221 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCDC113-204ENST00000566498 FAT3Q8TDW7 4589 aa11.92□□□□□ -0.5
CCDC113-204ENST00000566498 M0QXV9 152 aa11.91□□□□□ -0.5
CCDC113-204ENST00000566498 CHCHD1Q96BP2 118 aaKnown RBP11.91□□□□□ -0.5
CCDC113-204ENST00000566498 XAGE1AQ9HD64 81 aa11.91□□□□□ -0.5
CCDC113-204ENST00000566498 UBE2BP63146 152 aa11.9□□□□□ -0.5
CCDC113-204ENST00000566498 SERTAD4-AS1Q5TG53 156 aa11.9□□□□□ -0.5
CCDC113-204ENST00000566498 REG3GQ6UW15 175 aa11.9□□□□□ -0.5
CCDC113-204ENST00000566498 KRTAP7-1Q8IUC3 87 aa11.9□□□□□ -0.5
CCDC113-204ENST00000566498 TRGC2P03986 189 aa11.88□□□□□ -0.51
CCDC113-204ENST00000566498 MT1HL1P0DM35 61 aa11.88□□□□□ -0.51
CCDC113-204ENST00000566498 ZNF22P17026 224 aaPredicted RBP11.87□□□□□ -0.51
CCDC113-204ENST00000566498 TMEM170BQ5T4T1 132 aa11.87□□□□□ -0.51
CCDC113-204ENST00000566498 LINC01600Q96MT4 127 aa11.87□□□□□ -0.51
CCDC113-204ENST00000566498 HSBP1O75506 76 aa11.86□□□□□ -0.51
CCDC113-204ENST00000566498 KRTAP11-1Q8IUC1 163 aa11.86□□□□□ -0.51
CCDC113-204ENST00000566498 IFI27L1Q96BM0 104 aa11.86□□□□□ -0.51
CCDC113-204ENST00000566498 CHTOPQ9Y3Y2 248 aaKnown RBP11.86□□□□□ -0.51
CCDC113-204ENST00000566498 C22orf24Q9Y442 160 aa11.85□□□□□ -0.51
CCDC113-204ENST00000566498 IGLV5-39A0A0G2JS06 123 aa11.84□□□□□ -0.51
CCDC113-204ENST00000566498 C11orf86A6NJI1 115 aa11.84□□□□□ -0.51
CCDC113-204ENST00000566498 IGLV7-43P04211 117 aa11.84□□□□□ -0.51
CCDC113-204ENST00000566498 FAM19A2Q8N3H0 131 aa11.84□□□□□ -0.51
CCDC113-204ENST00000566498 LBHQ53QV2 105 aaPredicted RBP11.83□□□□□ -0.52
CCDC113-204ENST00000566498 PFN2P35080 140 aa11.82□□□□□ -0.52
CCDC113-204ENST00000566498 DIRC1Q969H9 104 aa11.8□□□□□ -0.52
CCDC113-204ENST00000566498 TRAV12-1A0A0B4J245 112 aa11.79□□□□□ -0.52
CCDC113-204ENST00000566498 COLCA2A8K830 154 aa11.79□□□□□ -0.52
CCDC113-204ENST00000566498 MRPL55Q7Z7F7 128 aaKnown RBP11.78□□□□□ -0.52
CCDC113-204ENST00000566498 ZNF625Q96I27 306 aaPredicted RBP11.78□□□□□ -0.52
CCDC113-204ENST00000566498 H0Y8G0 127 aa11.77□□□□□ -0.53
CCDC113-204ENST00000566498 SERF1AO75920 110 aa11.77□□□□□ -0.53
CCDC113-204ENST00000566498 TP73-AS1Q9UF72 201 aa11.77□□□□□ -0.53
CCDC113-204ENST00000566498 PLA2G2DQ9UNK4 145 aa11.77□□□□□ -0.53
CCDC113-204ENST00000566498 LEPROTL1O95214 131 aa11.76□□□□□ -0.53
CCDC113-204ENST00000566498 ERG28Q9UKR5 140 aa11.76□□□□□ -0.53
CCDC113-204ENST00000566498 RPL37AP8A6NKH3 93 aa11.75□□□□□ -0.53
CCDC113-204ENST00000566498 KRTAP10-8P60410 259 aa11.75□□□□□ -0.53
CCDC113-204ENST00000566498 SFTA2Q6UW10 78 aa11.75□□□□□ -0.53
CCDC113-204ENST00000566498 TMEM223A0PJW6 202 aa11.74□□□□□ -0.53
CCDC113-204ENST00000566498 COX17Q14061 63 aa11.74□□□□□ -0.53
CCDC113-204ENST00000566498 NKAPP1Q8N9T2 125 aa11.74□□□□□ -0.53
CCDC113-204ENST00000566498 LINC00167Q96N53 147 aa11.74□□□□□ -0.53
CCDC113-204ENST00000566498 GAGE10A6NGK3 116 aa11.73□□□□□ -0.53
CCDC113-204ENST00000566498 H0Y9J4 135 aa11.73□□□□□ -0.53
CCDC113-204ENST00000566498 NUPR1O60356 82 aa11.73□□□□□ -0.53
CCDC113-204ENST00000566498 FABP4P15090 132 aa11.73□□□□□ -0.53
CCDC113-204ENST00000566498 ODF1Q14990 250 aa11.72□□□□□ -0.53
CCDC113-204ENST00000566498 SND1-IT1Q9HBX3 110 aa11.72□□□□□ -0.53
CCDC113-204ENST00000566498 HSPB8Q9UJY1 196 aa11.72□□□□□ -0.53
CCDC113-204ENST00000566498 LINC00158P58513 81 aa11.71□□□□□ -0.53
CCDC113-204ENST00000566498 LINC00310P59036 64 aa11.71□□□□□ -0.53
CCDC113-204ENST00000566498 SCO1O75880 301 aa11.7□□□□□ -0.54
CCDC113-204ENST00000566498 ZNF861PO60384 105 aa11.69□□□□□ -0.54
CCDC113-204ENST00000566498 IGLV5-37A0A075B6J1 123 aa11.68□□□□□ -0.54
CCDC113-204ENST00000566498 A0A0U1RRA0 63 aa11.68□□□□□ -0.54
CCDC113-204ENST00000566498 RPL24P83731 157 aaKnown RBP11.68□□□□□ -0.54
CCDC113-204ENST00000566498 BCE1O60756 84 aa11.67□□□□□ -0.54
CCDC113-204ENST00000566498 ATP6V1G1O75348 118 aa11.67□□□□□ -0.54
CCDC113-204ENST00000566498 PRR26Q8N8Z3 221 aa11.67□□□□□ -0.54
CCDC113-204ENST00000566498 RPL28P46779 137 aaKnown RBP11.65□□□□□ -0.54
CCDC113-204ENST00000566498 IGKV2-28A0A075B6P5 120 aa11.64□□□□□ -0.55
CCDC113-204ENST00000566498 IGKV2D-28P01615 120 aa11.64□□□□□ -0.55
CCDC113-204ENST00000566498 VPREB1P12018 145 aa11.64□□□□□ -0.55
CCDC113-204ENST00000566498 PLNP26678 52 aa11.64□□□□□ -0.55
CCDC113-204ENST00000566498 MEIG1Q5JSS6 88 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms