RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 DPH3P1Q9H4G8 78 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 SMPXQ9UHP9 88 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 WNK2Q9Y3S1 2297 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 SPTA1P02549 2419 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 ZNF292O60281 2723 aa1.96□□□□□ -2.1
CNOT1-209ENST00000566240 DMXL1Q9Y485 3027 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 D6R8Y8 96 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 K7EMI3 77 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 M0R143 59 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 BAALC-AS2P0C853 105 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 MIFP14174 115 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 ZNF56Q15929 161 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 PYY3Q5JQD4 70 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 FOXI2Q6ZQN5 318 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 Q8N2B8 174 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 PMCHL2Q9BQD1 86 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 UQCR10Q9UDW1 63 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 FRYLO94915 3013 aa1.95□□□□□ -2.1
CNOT1-209ENST00000566240 ANKRD11Q6UB99 2663 aaPredicted RBP1.94□□□□□ -2.1
CNOT1-209ENST00000566240 SPTBN2O15020 2390 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 IGF2RP11717 2491 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 ROS1P08922 2347 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 MUC3AQ02505 3323 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 A0A096LNT2 108 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 IGHV1-24A0A0C4DH33 117 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 CLPSL1A2RUU4 121 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 C2orf70A6NJV1 201 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 IGLC6P0CF74 106 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 PLNP26678 52 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 FCER1GP30273 86 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 UBE2BP63146 152 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 SPATA45Q537H7 98 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 FAM74A4Q5TZK3 123 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 MYOZ3Q8TDC0 251 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 NAA38Q9BRA0 125 aaKnown RBP1.94□□□□□ -2.1
CNOT1-209ENST00000566240 CNFNQ9BYD5 112 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 TMEM126AQ9H061 195 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 AGPAT4-IT1Q9H0P7 198 aa1.94□□□□□ -2.1
CNOT1-209ENST00000566240 TPRP12270 2363 aaKnown RBP1.94□□□□□ -2.1
CNOT1-209ENST00000566240 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.94□□□□□ -2.18e-12■■■■■ 33.5
CNOT1-209ENST00000566240 MAP1BP46821 2468 aaKnown RBP1.93□□□□□ -2.1
CNOT1-209ENST00000566240 AKAP13Q12802 2813 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 FRYQ5TBA9 3013 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 CACNA1BQ00975 2339 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 TRAV12-3A0A0B4J271 114 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 A8MWV9 139 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 SYS1-DBNDD2H3BUS1 97 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 TMEM256-PLSCR3K7ERE1 68 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 M0R378 163 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 NCR2O95944 276 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 C3orf79P0CE67 100 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 HLA-DRB4P13762 266 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 DEFB131AP59861 70 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 ESRGQ1W209 222 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 SPINK13Q1W4C9 94 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 DEFB136Q30KP8 78 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 SOSTDC1Q6X4U4 206 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 LINC00322Q6ZN03 302 aaPredicted RBP1.93□□□□□ -2.1
CNOT1-209ENST00000566240 NDUFA11Q86Y39 141 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 FAM19A2Q8N3H0 131 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 Q8N8P6 123 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 IFI27L1Q96BM0 104 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 C20orf78Q9BR46 151 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 SMIM2Q9BVW6 85 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 PRO1933Q9H354 126 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 ST20Q9HBF5 79 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 HLA-DRB4X5D2U9 266 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 ABCA2Q9BZC7 2435 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 TLN1Q9Y490 2541 aaKnown RBP1.93□□□□□ -2.1
CNOT1-209ENST00000566240 WDFY3Q8IZQ1 3526 aa1.93□□□□□ -2.1
CNOT1-209ENST00000566240 SPTBN1Q01082 2364 aaKnown RBP1.93□□□□□ -2.1
CNOT1-209ENST00000566240 MYO15AQ9UKN7 3530 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 M0R2P5 195 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 DPM2O94777 84 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 HTN1P15515 57 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 EVI2AP22794 236 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 IFI27P40305 119 aaPredicted RBP1.92□□□□□ -2.1
CNOT1-209ENST00000566240 INSL3P51460 131 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 RHOHQ15669 191 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 TDRG1Q3Y452 100 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 COL5A1-AS1Q5SY13 56 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 C3orf56Q8N813 242 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 C2orf88Q9BSF0 95 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 CELSR3Q9NYQ7 3312 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 FBN1P35555 2871 aaKnown RBP1.92□□□□□ -2.1
CNOT1-209ENST00000566240 CFAP54Q96N23 3096 aa1.92□□□□□ -2.1
CNOT1-209ENST00000566240 LOC400499M0QZD8 3231 aa1.91□□□□□ -2.1
CNOT1-209ENST00000566240 PIEZO2Q9H5I5 2752 aa1.91□□□□□ -2.1
CNOT1-209ENST00000566240 TRAV12-2A0A075B6T6 113 aa1.91□□□□□ -2.1
CNOT1-209ENST00000566240 LINC00587B1AMM8 73 aa1.91□□□□□ -2.1
CNOT1-209ENST00000566240 TIMM17BO60830 172 aa1.91□□□□□ -2.1
CNOT1-209ENST00000566240 IGKCP01834 107 aa1.91□□□□□ -2.1
CNOT1-209ENST00000566240 PRB4P10163 310 aaPredicted RBP1.91□□□□□ -2.1
CNOT1-209ENST00000566240 CRIP1P50238 77 aa1.91□□□□□ -2.1
CNOT1-209ENST00000566240 GDF5OSQ5U4N7 250 aa1.91□□□□□ -2.1
CNOT1-209ENST00000566240 LINC01545Q5VT33 79 aa1.91□□□□□ -2.1
CNOT1-209ENST00000566240 C10orf99Q6UWK7 81 aa1.91□□□□□ -2.1
CNOT1-209ENST00000566240 ATOH7Q8N100 152 aa1.91□□□□□ -2.1
CNOT1-209ENST00000566240 TMEM263Q8WUH6 116 aaKnown RBP1.91□□□□□ -2.1
CNOT1-209ENST00000566240 TMEM141Q96I45 108 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms