RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SPINK14Q6IE38 97 aa2.11□□□□□ -2.07
CHD9-218ENST00000566029 FAM218AQ96MZ4 157 aa2.11□□□□□ -2.07
CHD9-218ENST00000566029 CLPSL2Q6UWE3 100 aa2.11□□□□□ -2.07
CHD9-218ENST00000566029 OCR1Q9BZK8 76 aa2.11□□□□□ -2.07
CHD9-218ENST00000566029 PSORS1C2Q9UIG4 136 aa2.11□□□□□ -2.07
CHD9-218ENST00000566029 CCDC168Q8NDH2 2452 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 K7EQD1 137 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 SPAG11BQ08648 103 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 C6orf99Q4VX62 202 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 PRO0255Q9UI72 69 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 PRR14LQ5THK1 2151 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 MTORP42345 2549 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 IGKV4-1P06312 121 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 LYPD2Q6UXB3 125 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 RBM12B-AS1Q9P1G2 102 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 SPAG11AQ6PDA7 123 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 DEFB124Q8NES8 71 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 PTPRQQ9UMZ3 2332 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 IBA57-AS1B1ANH7 110 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 FP248Q71RG6 208 aaPredicted RBP2.1□□□□□ -2.07
CHD9-218ENST00000566029 IGLV8-61A0A075B6I0 122 aa2.1□□□□□ -2.07
CHD9-218ENST00000566029 NDUFAF8A1L188 74 aa2.09□□□□□ -2.07
CHD9-218ENST00000566029 ODF3BA8MYP8 253 aa2.09□□□□□ -2.07
CHD9-218ENST00000566029 PIEZO2Q9H5I5 2752 aa2.09□□□□□ -2.07
CHD9-218ENST00000566029 PKD1L2Q7Z442 2459 aa2.09□□□□□ -2.07
CHD9-218ENST00000566029 FAM19A1Q7Z5A9 133 aa2.09□□□□□ -2.07
CHD9-218ENST00000566029 SONP18583 2426 aaKnown RBP2.09□□□□□ -2.07
CHD9-218ENST00000566029 RHPN1-AS1Q9BWJ2 59 aa2.09□□□□□ -2.07
CHD9-218ENST00000566029 TRAV10A0A0B4J240 114 aa2.09□□□□□ -2.07
CHD9-218ENST00000566029 SPATA3Q8NHX4 192 aa2.09□□□□□ -2.07
CHD9-218ENST00000566029 SPACA4Q8TDM5 124 aa2.09□□□□□ -2.07
CHD9-218ENST00000566029 A0A1B0GUV1 79 aa2.09□□□□□ -2.07
CHD9-218ENST00000566029 H7BZZ5 65 aa2.09□□□□□ -2.07
CHD9-218ENST00000566029 GNRH2O43555 120 aa2.09□□□□□ -2.08
CHD9-218ENST00000566029 ZFHX2Q9C0A1 2572 aaPredicted RBP2.09□□□□□ -2.08
CHD9-218ENST00000566029 HTN3P15516 51 aa2.09□□□□□ -2.08
CHD9-218ENST00000566029 LINC00846Q9NV44 126 aa2.08□□□□□ -2.08
CHD9-218ENST00000566029 LY6G6DO95868 133 aa2.08□□□□□ -2.08
CHD9-218ENST00000566029 SLURP1P55000 103 aa2.08□□□□□ -2.08
CHD9-218ENST00000566029 LINC00167Q96N53 147 aa2.08□□□□□ -2.08
CHD9-218ENST00000566029 LY6HO94772 140 aa2.08□□□□□ -2.08
CHD9-218ENST00000566029 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.08□□□□□ -2.08
CHD9-218ENST00000566029 USP9XQ93008 2570 aaPredicted RBP2.08□□□□□ -2.08
CHD9-218ENST00000566029 Q1T7F1 81 aa2.08□□□□□ -2.08
CHD9-218ENST00000566029 DEFB131AP59861 70 aa2.08□□□□□ -2.08
CHD9-218ENST00000566029 M0QY20 66 aa2.08□□□□□ -2.08
CHD9-218ENST00000566029 NAV2Q8IVL1 2488 aa2.08□□□□□ -2.08
CHD9-218ENST00000566029 CCKP06307 115 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 CDKN2A-AS1Q9UH64 79 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 IGKV2-28A0A075B6P5 120 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 IGKV2D-28P01615 120 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 SND1-IT1Q9HBX3 110 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 A0A1W2PNU3 283 aaPredicted RBP2.07□□□□□ -2.08
CHD9-218ENST00000566029 INAFM1C9JVW0 142 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 WFDC13Q8IUB5 93 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 C6orf223Q8N319 242 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 A8MUN3 132 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 CHTF8P0CG12 524 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 C9orf129Q5T035 196 aaKnown RBP2.07□□□□□ -2.08
CHD9-218ENST00000566029 CASC10Q5T4H9 136 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 TMEM105Q8N8V8 129 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 PLA2G1BP04054 148 aaKnown RBP2.07□□□□□ -2.08
CHD9-218ENST00000566029 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.07□□□□□ -2.08
CHD9-218ENST00000566029 NOP10Q9NPE3 64 aaKnown RBP2.07□□□□□ -2.08
CHD9-218ENST00000566029 TRGV1A0A0A0MS02 117 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 A0A096LPF7 62 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 K7EQZ3 153 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 CSNK1G2-AS1Q8NCQ2 148 aa2.07□□□□□ -2.08
CHD9-218ENST00000566029 COX6B2Q6YFQ2 88 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 Q6ZQY7 126 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 Q8N9L7 120 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 CSPG4Q6UVK1 2322 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 HIVEP3Q5T1R4 2406 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 CDC42SE1Q9NRR8 79 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 FAM215AQ9Y5M1 114 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 LUZP6Q538Z0 58 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 LINC00337Q8N6G1 96 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 C11orf72Q8NBR9 251 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 BRD3OSQ6XYD6 125 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 KLLNB2CW77 178 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 KRTAP21-3Q3LHN1 58 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 DIRC1Q969H9 104 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 GPR179Q6PRD1 2367 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 DEFB116Q30KQ4 102 aa2.06□□□□□ -2.08
CHD9-218ENST00000566029 ROS1P08922 2347 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 TECTAO75443 2155 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 A0A087WYN8 130 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 IGKV2-24A0A0C4DH68 120 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 ETDCA0A1B0GVM5 59 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 SSBP3-AS1Q7Z2R9 100 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 LINC00208Q96KT6 92 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 PCOTHQ58A44 107 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 C9orf163Q8N9P6 203 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 Q8NA96 180 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 DEFB1P60022 68 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 TTC28Q96AY4 2481 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 SPTBN4Q9H254 2564 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 BDP1A6H8Y1 2624 aa2.05□□□□□ -2.08
CHD9-218ENST00000566029 MIR7-3HGQ8N6C7 128 aa2.04□□□□□ -2.08
CHD9-218ENST00000566029 A8MTW9 85 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 347.2 ms