RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 TOMM7Q9P0U1 55 aa4.22□□□□□ -1.73
CHD9-217ENST00000565832 STARD9Q9P2P6 4700 aa4.22□□□□□ -1.73
CHD9-217ENST00000565832 IGLV5-39A0A0G2JS06 123 aa4.21□□□□□ -1.73
CHD9-217ENST00000565832 IGLL5B9A064 214 aa4.21□□□□□ -1.73
CHD9-217ENST00000565832 H3BRM9 83 aa4.21□□□□□ -1.73
CHD9-217ENST00000565832 SMAGPQ0VAQ4 97 aa4.21□□□□□ -1.73
CHD9-217ENST00000565832 LCE3BQ5TA77 95 aa4.21□□□□□ -1.73
CHD9-217ENST00000565832 ENHOQ6UWT2 76 aa4.21□□□□□ -1.73
CHD9-217ENST00000565832 TM2D2Q9BX73 214 aa4.21□□□□□ -1.73
CHD9-217ENST00000565832 Q9H8V8 135 aa4.21□□□□□ -1.73
CHD9-217ENST00000565832 NHP2Q9NX24 153 aaKnown RBP4.21□□□□□ -1.73
CHD9-217ENST00000565832 DNAH1Q9P2D7 4330 aa4.21□□□□□ -1.74
CHD9-217ENST00000565832 PRYO14603 147 aa4.21□□□□□ -1.74
CHD9-217ENST00000565832 PRSS2P07478 247 aa4.21□□□□□ -1.74
CHD9-217ENST00000565832 SEC11AP67812 179 aa4.21□□□□□ -1.74
CHD9-217ENST00000565832 ZFAND6Q6FIF0 208 aa4.21□□□□□ -1.74
CHD9-217ENST00000565832 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
CHD9-217ENST00000565832 CHCHD10Q8WYQ3 142 aaPredicted RBP4.21□□□□□ -1.74
CHD9-217ENST00000565832 LITAFQ99732 161 aa4.21□□□□□ -1.74
CHD9-217ENST00000565832 A0A087WZ39 114 aa4.2□□□□□ -1.74
CHD9-217ENST00000565832 H3BNG1 76 aa4.2□□□□□ -1.74
CHD9-217ENST00000565832 SS18Q15532 418 aa4.2□□□□□ -1.74
CHD9-217ENST00000565832 SH2D6Q7Z4S9 175 aa4.2□□□□□ -1.74
CHD9-217ENST00000565832 MUSTN1Q8IVN3 82 aa4.2□□□□□ -1.74
CHD9-217ENST00000565832 LINC00526Q96FQ7 95 aa4.2□□□□□ -1.74
CHD9-217ENST00000565832 TRAV10A0A0B4J240 114 aa4.2□□□□□ -1.74
CHD9-217ENST00000565832 C2orf82Q6UX34 121 aa4.2□□□□□ -1.74
CHD9-217ENST00000565832 UBE2WQ96B02 151 aa4.2□□□□□ -1.74
CHD9-217ENST00000565832 B9D2Q9BPU9 175 aa4.2□□□□□ -1.74
CHD9-217ENST00000565832 COX11Q9Y6N1 276 aa4.2□□□□□ -1.74
CHD9-217ENST00000565832 KMT2AQ03164 3969 aa4.19□□□□□ -1.74
CHD9-217ENST00000565832 SFTA2Q6UW10 78 aa4.19□□□□□ -1.74
CHD9-217ENST00000565832 LINC00588Q9Y4M8 146 aa4.19□□□□□ -1.74
CHD9-217ENST00000565832 A6NDN8 102 aa4.19□□□□□ -1.74
CHD9-217ENST00000565832 H3BUT2 72 aa4.19□□□□□ -1.74
CHD9-217ENST00000565832 NDUFA1O15239 70 aa4.19□□□□□ -1.74
CHD9-217ENST00000565832 APOMO95445 188 aa4.19□□□□□ -1.74
CHD9-217ENST00000565832 SMIM13P0DJ93 91 aa4.19□□□□□ -1.74
CHD9-217ENST00000565832 COX7B2Q8TF08 81 aa4.19□□□□□ -1.74
CHD9-217ENST00000565832 PRR34Q9NV39 138 aa4.19□□□□□ -1.74
CHD9-217ENST00000565832 DYNC2H1Q8NCM8 4307 aaKnown RBP4.18□□□□□ -1.74
CHD9-217ENST00000565832 A4D1N5 150 aa4.18□□□□□ -1.74
CHD9-217ENST00000565832 CFC1BP0CG36 223 aa4.18□□□□□ -1.74
CHD9-217ENST00000565832 CFC1P0CG37 223 aa4.18□□□□□ -1.74
CHD9-217ENST00000565832 TAL2Q16559 108 aa4.18□□□□□ -1.74
CHD9-217ENST00000565832 C6orf226Q5I0X4 101 aa4.18□□□□□ -1.74
CHD9-217ENST00000565832 CFAP161Q6P656 301 aa4.18□□□□□ -1.74
CHD9-217ENST00000565832 CD164L2Q6UWJ8 174 aa4.18□□□□□ -1.74
CHD9-217ENST00000565832 C6orf223Q8N319 242 aa4.18□□□□□ -1.74
CHD9-217ENST00000565832 SPANXB1Q9NS25 103 aaPredicted RBP4.17□□□□□ -1.74
CHD9-217ENST00000565832 COX7A2LO14548 114 aa4.17□□□□□ -1.74
CHD9-217ENST00000565832 PFN2P35080 140 aa4.17□□□□□ -1.74
CHD9-217ENST00000565832 VAMP3Q15836 100 aa4.17□□□□□ -1.74
CHD9-217ENST00000565832 C9orf116Q5BN46 136 aaPredicted RBP4.17□□□□□ -1.74
CHD9-217ENST00000565832 TMEM238C9JI98 176 aa4.16□□□□□ -1.74
CHD9-217ENST00000565832 KIAA0087Q14695 138 aa4.16□□□□□ -1.74
CHD9-217ENST00000565832 MEIG1Q5JSS6 88 aa4.16□□□□□ -1.74
CHD9-217ENST00000565832 C10orf25Q5T742 122 aa4.16□□□□□ -1.74
CHD9-217ENST00000565832 SOSTDC1Q6X4U4 206 aa4.16□□□□□ -1.74
CHD9-217ENST00000565832 Q9HAA7 133 aa4.16□□□□□ -1.74
CHD9-217ENST00000565832 H7C2G1 150 aa4.16□□□□□ -1.74
CHD9-217ENST00000565832 MIAQ16674 131 aa4.16□□□□□ -1.74
CHD9-217ENST00000565832 KRTAP26-1Q6PEX3 210 aa4.16□□□□□ -1.74
CHD9-217ENST00000565832 A0A1B0GWB2 263 aa4.15□□□□□ -1.75
CHD9-217ENST00000565832 CRPP02741 224 aa4.15□□□□□ -1.75
CHD9-217ENST00000565832 LINC00158P58513 81 aa4.15□□□□□ -1.75
CHD9-217ENST00000565832 LINC01556Q5JQF7 62 aa4.15□□□□□ -1.75
CHD9-217ENST00000565832 UNQ6190/PRO20217Q6UXQ8 127 aa4.15□□□□□ -1.75
CHD9-217ENST00000565832 CCL18P55774 89 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 CKS1BP61024 79 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 CIRBPQ14011 172 aaKnown RBP4.14□□□□□ -1.75
CHD9-217ENST00000565832 HIGD2BQ4VC39 106 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 CASC10Q5T4H9 136 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 MIR7-3HGQ8N6C7 128 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 C15orf53Q8NAA6 179 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 LINC00308Q8TCZ7 52 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 SPANXDQ9BXN6 97 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 SPANXCQ9NY87 97 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 IGKV2D-24A0A075B6R9 120 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 A0A1W2PPM0 123 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 DNAH10OSP0CZ25 163 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 RPL24P83731 157 aaKnown RBP4.14□□□□□ -1.75
CHD9-217ENST00000565832 Q8IZM0 81 aa4.14□□□□□ -1.75
CHD9-217ENST00000565832 TSPAN13O95857 204 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 NHLRC4P0CG21 123 aaPredicted RBP4.13□□□□□ -1.75
CHD9-217ENST00000565832 PRR3P79522 188 aaKnown RBP4.13□□□□□ -1.75
CHD9-217ENST00000565832 UBE2V1Q13404 147 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 KRTAP1-5Q9BYS1 174 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 PRO1854Q9UHT4 67 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 APLNQ9ULZ1 77 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 TRAV8-4A0A0B4J246 113 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 GAGE10A6NGK3 116 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 TIMM17BO60830 172 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 HERV-K104P63124 156 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 SPAG11BQ08648 103 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 ERG28Q9UKR5 140 aa4.13□□□□□ -1.75
CHD9-217ENST00000565832 KLK5Q9Y337 293 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms