RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
SPSB3-207ENST00000565550 LINC00310P59036 64 aa11.85□□□□□ -0.51
SPSB3-207ENST00000565550 KIAA0087Q14695 138 aa11.85□□□□□ -0.51
SPSB3-207ENST00000565550 PMVKQ15126 192 aa11.85□□□□□ -0.51
SPSB3-207ENST00000565550 CHCHD1Q96BP2 118 aaKnown RBP11.85□□□□□ -0.51
SPSB3-207ENST00000565550 LINC01549A6NIU2 74 aa11.84□□□□□ -0.51
SPSB3-207ENST00000565550 NDUFA6P56556 154 aa11.84□□□□□ -0.51
SPSB3-207ENST00000565550 COA6Q5JTJ3 125 aaKnown RBP11.84□□□□□ -0.51
SPSB3-207ENST00000565550 FAM19A2Q8N3H0 131 aa11.84□□□□□ -0.51
SPSB3-207ENST00000565550 C2orf48Q96LS8 159 aa11.84□□□□□ -0.51
SPSB3-207ENST00000565550 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
SPSB3-207ENST00000565550 SERF1AO75920 110 aa11.83□□□□□ -0.52
SPSB3-207ENST00000565550 HERVK_113P63121 156 aa11.83□□□□□ -0.52
SPSB3-207ENST00000565550 C2orf82Q6UX34 121 aa11.83□□□□□ -0.52
SPSB3-207ENST00000565550 UNQ6190/PRO20217Q6UXQ8 127 aa11.83□□□□□ -0.52
SPSB3-207ENST00000565550 NUPR1O60356 82 aa11.82□□□□□ -0.52
SPSB3-207ENST00000565550 PRR3P79522 188 aaKnown RBP11.82□□□□□ -0.52
SPSB3-207ENST00000565550 LINC00469Q8N7U9 141 aa11.82□□□□□ -0.52
SPSB3-207ENST00000565550 TOMM7Q9P0U1 55 aa11.82□□□□□ -0.52
SPSB3-207ENST00000565550 TINCRA0A1B0GVN0 87 aa11.81□□□□□ -0.52
SPSB3-207ENST00000565550 C6orf48Q9UBA6 75 aa11.81□□□□□ -0.52
SPSB3-207ENST00000565550 TNXBP22105 4242 aa11.81□□□□□ -0.52
SPSB3-207ENST00000565550 S100A6P06703 90 aa11.8□□□□□ -0.52
SPSB3-207ENST00000565550 GAGE2BQ13066 116 aa11.8□□□□□ -0.52
SPSB3-207ENST00000565550 NDUFA1O15239 70 aa11.79□□□□□ -0.52
SPSB3-207ENST00000565550 HSBP1O75506 76 aa11.79□□□□□ -0.52
SPSB3-207ENST00000565550 SEC11AP67812 179 aa11.79□□□□□ -0.52
SPSB3-207ENST00000565550 LINC01561Q8N1V8 128 aa11.79□□□□□ -0.52
SPSB3-207ENST00000565550 LINC01600Q96MT4 127 aa11.79□□□□□ -0.52
SPSB3-207ENST00000565550 LINC00474Q9P2X8 69 aa11.79□□□□□ -0.52
SPSB3-207ENST00000565550 IGLV5-45A0A087WSX0 123 aa11.78□□□□□ -0.52
SPSB3-207ENST00000565550 LOC107984640A0A0U1RRK4 108 aa11.78□□□□□ -0.52
SPSB3-207ENST00000565550 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
SPSB3-207ENST00000565550 SPINK8P0C7L1 97 aa11.78□□□□□ -0.52
SPSB3-207ENST00000565550 RPL18AQ02543 176 aaKnown RBP11.78□□□□□ -0.52
SPSB3-207ENST00000565550 MRPL35Q9NZE8 188 aaKnown RBP11.78□□□□□ -0.52
SPSB3-207ENST00000565550 TMA7Q9Y2S6 64 aaKnown RBP11.78□□□□□ -0.52
SPSB3-207ENST00000565550 ATP5LO75964 103 aa11.77□□□□□ -0.53
SPSB3-207ENST00000565550 IGLC3P0DOY3 106 aa11.77□□□□□ -0.53
SPSB3-207ENST00000565550 PTTG1IPP53801 180 aa11.77□□□□□ -0.53
SPSB3-207ENST00000565550 C9orf116Q5BN46 136 aaPredicted RBP11.77□□□□□ -0.53
SPSB3-207ENST00000565550 PACRGQ96M98 296 aaPredicted RBP11.77□□□□□ -0.53
SPSB3-207ENST00000565550 PKIGQ9Y2B9 76 aa11.77□□□□□ -0.53
SPSB3-207ENST00000565550 ZNF22P17026 224 aaPredicted RBP11.75□□□□□ -0.53
SPSB3-207ENST00000565550 Q8IZM0 81 aa11.75□□□□□ -0.53
SPSB3-207ENST00000565550 IFI27L1Q96BM0 104 aa11.75□□□□□ -0.53
SPSB3-207ENST00000565550 C11orf86A6NJI1 115 aa11.74□□□□□ -0.53
SPSB3-207ENST00000565550 PRSS2P07478 247 aa11.74□□□□□ -0.53
SPSB3-207ENST00000565550 ODF1Q14990 250 aa11.74□□□□□ -0.53
SPSB3-207ENST00000565550 RNF151Q2KHN1 245 aa11.74□□□□□ -0.53
SPSB3-207ENST00000565550 F8WDY8 70 aa11.73□□□□□ -0.53
SPSB3-207ENST00000565550 C6orf226Q5I0X4 101 aa11.73□□□□□ -0.53
SPSB3-207ENST00000565550 SPINK6Q6UWN8 80 aa11.73□□□□□ -0.53
SPSB3-207ENST00000565550 Q6ZRP5 223 aa11.73□□□□□ -0.53
SPSB3-207ENST00000565550 C5orf52A6NGY3 159 aa11.72□□□□□ -0.53
SPSB3-207ENST00000565550 SNRPEP62304 92 aaKnown RBP11.72□□□□□ -0.53
SPSB3-207ENST00000565550 CHTOPQ9Y3Y2 248 aaKnown RBP11.72□□□□□ -0.53
SPSB3-207ENST00000565550 A0A1W2PNN7 141 aa11.71□□□□□ -0.53
SPSB3-207ENST00000565550 H0Y8G0 127 aa11.71□□□□□ -0.53
SPSB3-207ENST00000565550 CKS1BP61024 79 aa11.71□□□□□ -0.53
SPSB3-207ENST00000565550 SRSF9Q13242 221 aaKnown RBP eCLIP11.71□□□□□ -0.53
SPSB3-207ENST00000565550 HIST3H2BBQ8N257 126 aa11.71□□□□□ -0.53
SPSB3-207ENST00000565550 COX7B2Q8TF08 81 aa11.71□□□□□ -0.53
SPSB3-207ENST00000565550 LRP2P98164 4655 aa11.7□□□□□ -0.54
SPSB3-207ENST00000565550 TRBV30A0A0K0K1B3 111 aa11.7□□□□□ -0.54
SPSB3-207ENST00000565550 FABP4P15090 132 aa11.7□□□□□ -0.54
SPSB3-207ENST00000565550 GAGE2EQ4V326 116 aa11.7□□□□□ -0.54
SPSB3-207ENST00000565550 GAGE2DQ9UEU5 116 aa11.7□□□□□ -0.54
SPSB3-207ENST00000565550 FAM168BA1KXE4 195 aa11.69□□□□□ -0.54
SPSB3-207ENST00000565550 LEPROTL1O95214 131 aa11.69□□□□□ -0.54
SPSB3-207ENST00000565550 KRTAP10-8P60410 259 aa11.69□□□□□ -0.54
SPSB3-207ENST00000565550 REG3GQ6UW15 175 aa11.69□□□□□ -0.54
SPSB3-207ENST00000565550 TRAV12-1A0A0B4J245 112 aa11.68□□□□□ -0.54
SPSB3-207ENST00000565550 H3BRM9 83 aa11.68□□□□□ -0.54
SPSB3-207ENST00000565550 TLX1NBP0CAT3 122 aa11.68□□□□□ -0.54
SPSB3-207ENST00000565550 S100A2P29034 98 aa11.68□□□□□ -0.54
SPSB3-207ENST00000565550 TMEM170BQ5T4T1 132 aa11.68□□□□□ -0.54
SPSB3-207ENST00000565550 HSPB8Q9UJY1 196 aa11.67□□□□□ -0.54
SPSB3-207ENST00000565550 IGLV5-39A0A0G2JS06 123 aa11.66□□□□□ -0.54
SPSB3-207ENST00000565550 F8VRH5 84 aa11.66□□□□□ -0.54
SPSB3-207ENST00000565550 C9orf129Q5T035 196 aaKnown RBP11.65□□□□□ -0.54
SPSB3-207ENST00000565550 KRTAP7-1Q8IUC3 87 aa11.65□□□□□ -0.54
SPSB3-207ENST00000565550 HIST1H2BLQ99880 126 aa11.65□□□□□ -0.54
SPSB3-207ENST00000565550 NDUFC2-KCTD14E9PQ53 114 aa11.64□□□□□ -0.55
SPSB3-207ENST00000565550 PHF5AQ7RTV0 110 aaKnown RBP11.63□□□□□ -0.55
SPSB3-207ENST00000565550 FAM19A5Q7Z5A7 132 aaPredicted RBP11.63□□□□□ -0.55
SPSB3-207ENST00000565550 PMCHL2Q9BQD1 86 aa11.63□□□□□ -0.55
SPSB3-207ENST00000565550 TMEM223A0PJW6 202 aa11.62□□□□□ -0.55
SPSB3-207ENST00000565550 CXCL5P42830 114 aa11.62□□□□□ -0.55
SPSB3-207ENST00000565550 XAGE1AQ9HD64 81 aa11.61□□□□□ -0.55
SPSB3-207ENST00000565550 MAP1LC3CQ9BXW4 147 aa11.6□□□□□ -0.55
SPSB3-207ENST00000565550 PSORS1C2Q9UIG4 136 aa11.6□□□□□ -0.55
SPSB3-207ENST00000565550 RNF213Q63HN8 5207 aa11.59□□□□□ -0.55
SPSB3-207ENST00000565550 ZNF625Q96I27 306 aaPredicted RBP11.59□□□□□ -0.55
SPSB3-207ENST00000565550 KRTAP11-1Q8IUC1 163 aa11.58□□□□□ -0.56
SPSB3-207ENST00000565550 SYS1-DBNDD2H3BUS1 97 aa11.56□□□□□ -0.56
SPSB3-207ENST00000565550 C3orf79P0CE67 100 aa11.56□□□□□ -0.56
SPSB3-207ENST00000565550 PFN2P35080 140 aa11.56□□□□□ -0.56
SPSB3-207ENST00000565550 KRTDAPP60985 99 aa11.56□□□□□ -0.56
SPSB3-207ENST00000565550 C1orf137Q5JT78 98 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms