RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 TANC1Q9C0D5 1861 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 MGAM2Q2M2H8 2515 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 NRKQ7Z2Y5 1582 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 MRC1P22897 1456 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 GAPVD1Q14C86 1478 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 TEX14Q8IWB6 1497 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 FYCO1Q9BQS8 1478 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 NLRP1Q9C000 1473 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 CCNB3Q8WWL7 1395 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 PLIN4Q96Q06 1357 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 PHIPQ8WWQ0 1821 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 TRBV7-7A0A0K0K1E9 115 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 CLPSL1A2RUU4 121 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 FAM223BA6NKX1 122 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 CPSF4LA6NMK7 179 aaKnown RBP0.23□□□□□ -2.37
CHD9-211ENST00000564600 H0YGG7 62 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 ADIRFQ15847 76 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 DEFB112Q30KQ8 113 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 HEPN1Q6WQI6 88 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 COX6B2Q6YFQ2 88 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 S100A16Q96FQ6 103 aaKnown RBP0.23□□□□□ -2.37
CHD9-211ENST00000564600 LINC01600Q96MT4 127 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 NALCNQ8IZF0 1738 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 ARHGAP5Q13017 1502 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 ZMYM4Q5VZL5 1548 aa0.23□□□□□ -2.37
CHD9-211ENST00000564600 PZPP20742 1482 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 MLH3Q9UHC1 1453 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 RAPGEF2Q9Y4G8 1499 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 CNTLNQ9NXG0 1405 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 SBF2Q86WG5 1849 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 TNCP24821 2201 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 ARAP2Q8WZ64 1704 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 WDFY4Q6ZS81 3184 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 NAV3Q8IVL0 2385 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 G3V318 75 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 MRPL33O75394 65 aaKnown RBP0.22□□□□□ -2.37
CHD9-211ENST00000564600 HMGN2P05204 90 aaKnown RBP0.22□□□□□ -2.37
CHD9-211ENST00000564600 C3orf79P0CE67 100 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 SPRR1AP35321 89 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 IFI27P40305 119 aaPredicted RBP0.22□□□□□ -2.37
CHD9-211ENST00000564600 GNG2P59768 71 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 C6orf201Q7Z4U5 140 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 LINC00643Q86TS7 51 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 DEFB105AQ8NG35 78 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 HIGD1BQ9P298 99 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 LINC00474Q9P2X8 69 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 NHSL1Q5SYE7 1610 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 GOLGA3Q08378 1498 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 BCL9LQ86UU0 1499 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 SRRM2Q9UQ35 2752 aaKnown RBP0.22□□□□□ -2.37
CHD9-211ENST00000564600 SPTA1P02549 2419 aa0.22□□□□□ -2.37
CHD9-211ENST00000564600 WNK1Q9H4A3 2382 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 NCOA3Q9Y6Q9 1424 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 CEP295Q9C0D2 2601 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 A0A0C4DFX4 3053 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 CEP290O15078 2479 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 FLNCQ14315 2725 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 BAZ1AQ9NRL2 1556 aaPredicted RBP0.21□□□□□ -2.38
CHD9-211ENST00000564600 A0A087WXM4 84 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 CEBPZOSA8MTT3 80 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 DEFB107AQ8IZN7 70 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 DEFB123Q8N688 67 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 GAFA1Q96PS6 74 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 APLNQ9ULZ1 77 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 PATJQ8NI35 1801 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 CACNA1EQ15878 2313 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 KDM3BQ7LBC6 1761 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 MEGF8Q7Z7M0 2845 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 MRC2Q9UBG0 1479 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 CADP27708 2225 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 MYO7AQ13402 2215 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 CHD6Q8TD26 2715 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 VPS8Q8N3P4 1428 aa0.21□□□□□ -2.38
CHD9-211ENST00000564600 TPRP12270 2363 aaKnown RBP0.2□□□□□ -2.38
CHD9-211ENST00000564600 DOCK1Q14185 1865 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 UBR3Q6ZT12 1888 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 ANKRD36BQ8N2N9 1353 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 PSME4Q14997 1843 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 ARFGEF1Q9Y6D6 1849 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 UTP20O75691 2785 aaKnown RBP0.2□□□□□ -2.38
CHD9-211ENST00000564600 MYO9AB2RTY4 2548 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 TLN1Q9Y490 2541 aaKnown RBP0.2□□□□□ -2.38
CHD9-211ENST00000564600 EPRSP07814 1512 aaKnown RBP0.2□□□□□ -2.38
CHD9-211ENST00000564600 ARHGEF12Q9NZN5 1544 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 MYMXA0A1B0GTQ4 84 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 IQCF6A8MYZ5 107 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 F8WEM9 126 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 K7EQZ3 153 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 IGLC3P0DOY3 106 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 SPRR1BP22528 89 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 WFDC9Q8NEX5 89 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 LINC00472Q9H8W2 130 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 SPG11Q96JI7 2443 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 A0A0G2JMZ2 1700 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 IFT172Q9UG01 1749 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 FLNBO75369 2602 aaKnown RBP0.2□□□□□ -2.38
CHD9-211ENST00000564600 ATRQ13535 2644 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 MAGI1Q96QZ7 1491 aaPredicted RBP0.2□□□□□ -2.38
CHD9-211ENST00000564600 MBD5Q9P267 1494 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 SPTBN2O15020 2390 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms