RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
CDR2-204ENST00000564542 C2orf66Q6UXQ4 117 aa8.29□□□□□ -1.08
CDR2-204ENST00000564542 FAM19A3Q7Z5A8 133 aa8.29□□□□□ -1.08
CDR2-204ENST00000564542 TYMSOSQ8TAI1 123 aa8.29□□□□□ -1.08
CDR2-204ENST00000564542 ALKBH7Q9BT30 221 aaPredicted RBP8.29□□□□□ -1.08
CDR2-204ENST00000564542 VCX2Q9H322 139 aa8.29□□□□□ -1.08
CDR2-204ENST00000564542 MAP1LC3AQ9H492 121 aa8.29□□□□□ -1.08
CDR2-204ENST00000564542 F8VRH5 84 aa8.28□□□□□ -1.08
CDR2-204ENST00000564542 Q8N8P6 123 aa8.28□□□□□ -1.08
CDR2-204ENST00000564542 FAT4Q6V0I7 4981 aa8.27□□□□□ -1.09
CDR2-204ENST00000564542 IGIPA6NJ69 53 aa8.26□□□□□ -1.09
CDR2-204ENST00000564542 HERVK_113P63121 156 aa8.26□□□□□ -1.09
CDR2-204ENST00000564542 SEC11AP67812 179 aa8.26□□□□□ -1.09
CDR2-204ENST00000564542 ORMDL2Q53FV1 153 aa8.26□□□□□ -1.09
CDR2-204ENST00000564542 CDKN2A-AS1Q9UH64 79 aa8.26□□□□□ -1.09
CDR2-204ENST00000564542 K7EMI3 77 aa8.25□□□□□ -1.09
CDR2-204ENST00000564542 CXCL5P42830 114 aa8.25□□□□□ -1.09
CDR2-204ENST00000564542 PAPPA-AS1Q5QFB9 102 aa8.24□□□□□ -1.09
CDR2-204ENST00000564542 RPL37AP8A6NKH3 93 aa8.23□□□□□ -1.09
CDR2-204ENST00000564542 LINC00167Q96N53 147 aa8.23□□□□□ -1.09
CDR2-204ENST00000564542 GEMIN7Q9H840 131 aaKnown RBP8.23□□□□□ -1.09
CDR2-204ENST00000564542 KRTAP13-2Q52LG2 175 aa8.22□□□□□ -1.09
CDR2-204ENST00000564542 KRTAP13-1Q8IUC0 172 aa8.22□□□□□ -1.09
CDR2-204ENST00000564542 FAM229BQ4G0N7 80 aa8.21□□□□□ -1.1
CDR2-204ENST00000564542 TIMM17AQ99595 171 aa8.21□□□□□ -1.1
CDR2-204ENST00000564542 RETNLBQ9BQ08 111 aa8.21□□□□□ -1.1
CDR2-204ENST00000564542 ANAPC11Q9NYG5 84 aa8.21□□□□□ -1.1
CDR2-204ENST00000564542 IGLV5-37A0A075B6J1 123 aa8.2□□□□□ -1.1
CDR2-204ENST00000564542 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
CDR2-204ENST00000564542 SMIM1B2RUZ4 78 aa8.2□□□□□ -1.1
CDR2-204ENST00000564542 G0S2P27469 103 aa8.2□□□□□ -1.1
CDR2-204ENST00000564542 TPRXLQ17RH7 258 aa8.2□□□□□ -1.1
CDR2-204ENST00000564542 LINC00304Q8N9R0 145 aa8.2□□□□□ -1.1
CDR2-204ENST00000564542 NXT2Q9NPJ8 142 aaKnown RBP8.2□□□□□ -1.1
CDR2-204ENST00000564542 UBE2AP49459 152 aa8.19□□□□□ -1.1
CDR2-204ENST00000564542 MUC17Q685J3 4493 aa8.19□□□□□ -1.1
CDR2-204ENST00000564542 PDZD11Q5EBL8 140 aa8.18□□□□□ -1.1
CDR2-204ENST00000564542 NKAPP1Q8N9T2 125 aa8.18□□□□□ -1.1
CDR2-204ENST00000564542 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
CDR2-204ENST00000564542 TOMM6Q96B49 74 aa8.18□□□□□ -1.1
CDR2-204ENST00000564542 CDIP1Q9H305 208 aa8.18□□□□□ -1.1
CDR2-204ENST00000564542 IGLV5-45A0A087WSX0 123 aa8.17□□□□□ -1.1
CDR2-204ENST00000564542 PNRC1Q12796 327 aaPredicted RBP8.17□□□□□ -1.1
CDR2-204ENST00000564542 KRTAP9-6A0A140TA67 174 aa8.16□□□□□ -1.1
CDR2-204ENST00000564542 TINCRA0A1B0GVN0 87 aa8.16□□□□□ -1.1
CDR2-204ENST00000564542 CTAG1AP78358 180 aa8.16□□□□□ -1.1
CDR2-204ENST00000564542 ERASQ7Z444 233 aa8.16□□□□□ -1.1
CDR2-204ENST00000564542 ANAPC16Q96DE5 110 aa8.16□□□□□ -1.1
CDR2-204ENST00000564542 IGKV2D-26A0A0A0MRZ7 120 aa8.15□□□□□ -1.1
CDR2-204ENST00000564542 MT-ND4LP03901 98 aa8.15□□□□□ -1.1
CDR2-204ENST00000564542 IGLV7-46A0A075B6I9 117 aa8.14□□□□□ -1.11
CDR2-204ENST00000564542 IGKV2-28A0A075B6P5 120 aa8.14□□□□□ -1.11
CDR2-204ENST00000564542 IGKV2D-28P01615 120 aa8.14□□□□□ -1.11
CDR2-204ENST00000564542 RAB5BP61020 215 aa8.14□□□□□ -1.11
CDR2-204ENST00000564542 SCGB3A1Q96QR1 104 aa8.14□□□□□ -1.11
CDR2-204ENST00000564542 SPINK8P0C7L1 97 aa8.13□□□□□ -1.11
CDR2-204ENST00000564542 SCO1O75880 301 aa8.12□□□□□ -1.11
CDR2-204ENST00000564542 ATP5LO75964 103 aa8.12□□□□□ -1.11
CDR2-204ENST00000564542 ADCYAP1P18509 176 aa8.12□□□□□ -1.11
CDR2-204ENST00000564542 PRLHP81277 87 aa8.12□□□□□ -1.11
CDR2-204ENST00000564542 LINC01549A6NIU2 74 aa8.11□□□□□ -1.11
CDR2-204ENST00000564542 CST9LQ9H4G1 147 aa8.11□□□□□ -1.11
CDR2-204ENST00000564542 FAM19A1Q7Z5A9 133 aa8.1□□□□□ -1.11
CDR2-204ENST00000564542 TMEM126AQ9H061 195 aa8.1□□□□□ -1.11
CDR2-204ENST00000564542 MRPL18Q9H0U6 180 aaKnown RBP8.1□□□□□ -1.11
CDR2-204ENST00000564542 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
CDR2-204ENST00000564542 KIAA1644Q3SXP7 199 aa8.09□□□□□ -1.11
CDR2-204ENST00000564542 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.11
CDR2-204ENST00000564542 A0A1B0GVG6 124 aa8.08□□□□□ -1.12
CDR2-204ENST00000564542 LINC01546A6NGU7 62 aa8.08□□□□□ -1.12
CDR2-204ENST00000564542 H3BRM9 83 aa8.08□□□□□ -1.12
CDR2-204ENST00000564542 VPREB1P12018 145 aa8.08□□□□□ -1.12
CDR2-204ENST00000564542 PFN2P35080 140 aa8.08□□□□□ -1.12
CDR2-204ENST00000564542 PMVKQ15126 192 aa8.08□□□□□ -1.12
CDR2-204ENST00000564542 M0R378 163 aa8.07□□□□□ -1.12
CDR2-204ENST00000564542 C3orf22Q8N5N4 141 aa8.07□□□□□ -1.12
CDR2-204ENST00000564542 PLEKHB2Q96CS7 222 aa8.07□□□□□ -1.12
CDR2-204ENST00000564542 SND1-IT1Q9HBX3 110 aa8.07□□□□□ -1.12
CDR2-204ENST00000564542 IGLV5-39A0A0G2JS06 123 aa8.06□□□□□ -1.12
CDR2-204ENST00000564542 RPL24P83731 157 aaKnown RBP8.06□□□□□ -1.12
CDR2-204ENST00000564542 ERG28Q9UKR5 140 aa8.06□□□□□ -1.12
CDR2-204ENST00000564542 COX17Q14061 63 aa8.05□□□□□ -1.12
CDR2-204ENST00000564542 SPAG11AQ6PDA7 123 aa8.05□□□□□ -1.12
CDR2-204ENST00000564542 CBLN2Q8IUK8 224 aa8.05□□□□□ -1.12
CDR2-204ENST00000564542 GNB1LQ9BYB4 327 aa8.05□□□□□ -1.12
CDR2-204ENST00000564542 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
CDR2-204ENST00000564542 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
CDR2-204ENST00000564542 TRAV9-1A0A075B6T8 112 aa8.03□□□□□ -1.12
CDR2-204ENST00000564542 HIGD2AQ9BW72 106 aa8.03□□□□□ -1.12
CDR2-204ENST00000564542 RAB14P61106 215 aa8.02□□□□□ -1.13
CDR2-204ENST00000564542 Q8NDZ9 215 aa8.02□□□□□ -1.13
CDR2-204ENST00000564542 SPRR4Q96PI1 79 aa8.02□□□□□ -1.13
CDR2-204ENST00000564542 ZNF22P17026 224 aaPredicted RBP8.01□□□□□ -1.13
CDR2-204ENST00000564542 FA2HQ7L5A8 372 aa8.01□□□□□ -1.13
CDR2-204ENST00000564542 SMCO4Q9NRQ5 59 aa8.01□□□□□ -1.13
CDR2-204ENST00000564542 KRTAP13-3Q3SY46 172 aa8□□□□□ -1.13
CDR2-204ENST00000564542 SFTA2Q6UW10 78 aa8□□□□□ -1.13
CDR2-204ENST00000564542 ZNF706Q9Y5V0 76 aaPredicted RBP8□□□□□ -1.13
CDR2-204ENST00000564542 ASB16-AS1Q495Z4 193 aa7.99□□□□□ -1.13
CDR2-204ENST00000564542 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms